iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090937

Ensembl Protein ID

ENSPTRP00000029364.5

UniProt Accession

H2QRD3; H2QRD3_PANTR

Genbank Protein ID

ENSPTRP00000029364

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03037563

Gene Name

DMXL1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000017166.5	ENSPTRT00000031779.5	ENSPTRP00000029364.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-13	48.0	2943	2980

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H ++v ++a  ++  ++v+Gs  g+ik+W+l+t+ ll+
   Q: 2943 HDSPVKAVAVdPTeEYFVTGSAEGNIKIWSLSTFGLLH 2980
           99*********777*******************99987 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MNLHQVLTGA VNPGDHCFSV GSIGDQRFTA YASGCDIVIL GSDFERLQII PGAKHGNIQV 60
GCVDCSMQQG KIAASYGNVI SIFEPVNLPK QKKNLELYSQ WQKSGQFFLE SIAHNITWDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCCGGGCTC GGGATGAGCC GCGGGCCCCA GCTGAGCGGC TCCGGCTCCA GGCGCCTGTC 60
GCTGCTTCTG CCGTCGCCAC CGAAGAGCGG CCGCCGCCCC TGAGGGAAGG AGGGAGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001368	Ailuropoda melanoleuca	92.62	0.00e+00	5565.00
IUUC-Atr-002754	Amborella trichopoda	23.72	1.00e-18	88.20
IUUC-Apl-003377	Anas platyrhynchos	76.23	0.00e+00	4501.00
IUUC-Aca-004649	Anolis carolinensis	74.40	0.00e+00	4334.00
IUUC-Aly-006404	Arabidopsis lyrata	31.25	6.00e-32	134.00
IUUC-Ath-006612	Arabidopsis thaliana	31.82	4.00e-30	128.00
IUUC-Ang-009742	Aspergillus niger	29.41	7.00e-39	156.00
IUUC-Ame-010919	Astyanax mexicanus	65.03	0.00e+00	3115.00
IUUC-Bta-013088	Bos taurus	92.53	0.00e+00	5589.00
IUUC-Bdi-014471	Brachypodium distachyon	23.32	3.00e-17	83.60
IUUC-Cja-019137	Callithrix jacchus	96.29	0.00e+00	5821.00
IUUC-Cfa-021215	Canis familiaris	92.95	0.00e+00	5594.00
IUUC-Cpo-022333	Cavia porcellus	86.03	0.00e+00	4974.00
IUUC-Csa-023151	Chlorocebus sabaeus	98.00	0.00e+00	5916.00
IUUC-Cho-024613	Choloepus hoffmanni	83.56	0.00e+00	1911.00
IUUC-Csv-026055	Ciona savignyi	30.50	0.00e+00	855.00
IUUC-Dno-029601	Dasypus novemcinctus	87.77	0.00e+00	5230.00
IUUC-Dor-030381	Dipodomys ordii	89.15	0.00e+00	1606.00
IUUC-Ete-032464	Echinops telfairi	84.14	0.00e+00	2692.00
IUUC-Eeu-035011	Erinaceus europaeus	84.59	0.00e+00	2590.00
IUUC-Fca-035735	Felis catus	92.91	0.00e+00	5575.00
IUUC-Fal-037367	Ficedula albicollis	77.10	0.00e+00	4459.00
IUUC-Gmo-038687	Gadus morhua	59.90	0.00e+00	2472.00
IUUC-Gac-041986	Gasterosteus aculeatus	61.21	0.00e+00	3439.00
IUUC-Ggo-044811	Gorilla gorilla	98.46	0.00e+00	5974.00
IUUC-Hsa-045950	Homo sapiens	99.38	0.00e+00	6039.00
IUUC-Lch-050020	Latimeria chalumnae	72.10	0.00e+00	4119.00
IUUC-Lpe-051382	Leersia perrieri	32.58	1.00e-42	169.00
IUUC-Loc-052909	Lepisosteus oculatus	70.13	0.00e+00	4065.00
IUUC-Laf-054195	Loxodonta africana	92.03	0.00e+00	5557.00
IUUC-Mcc-055646	Macaca mulatta	98.13	0.00e+00	5931.00
IUUC-Meu-056627	Macropus eugenii	77.89	0.00e+00	1506.00
IUUC-Mtr-058725	Medicago truncatula	35.98	4.00e-38	154.00
IUUC-Mga-060009	Meleagris gallopavo	66.09	0.00e+00	3712.00
IUUC-Mmr-060784	Microcebus murinus	93.08	0.00e+00	5536.00
IUUC-Mdo-062914	Monodelphis domestica	83.92	0.00e+00	5085.00
IUUC-Mmu-063808	Mus musculus	88.20	0.00e+00	5230.00
IUUC-Mlu-067458	Myotis lucifugus	89.03	0.00e+00	5326.00
IUUC-Nle-070123	Nomascus leucogenys	97.41	0.00e+00	5894.00
IUUC-Ont-071658	Oreochromis niloticus	61.95	0.00e+00	3545.00
IUUC-Ocu-074048	Oryctolagus cuniculus	89.42	0.00e+00	5372.00
IUUC-Oba-075826	Oryza barthii	28.09	7.00e-44	174.00
IUUC-Obr-076145	Oryza brachyantha	29.12	1.00e-40	162.00
IUUC-Ogu-078307	Oryza glumaepatula	27.75	2.00e-42	169.00
IUUC-Oin-080118	Oryza indica	27.92	1.00e-42	170.00
IUUC-Olo-080848	Oryza longistaminata	27.92	6.00e-43	170.00
IUUC-Oni-082792	Oryza nivara	27.25	2.00e-43	172.00
IUUC-Opu-084153	Oryza punctata	28.06	2.00e-42	169.00
IUUC-Oru-084415	Oryza rufipogon	26.94	5.00e-43	171.00
IUUC-Osa-085332	Oryza sativa	23.64	1.00e-20	94.40
IUUC-Ola-086945	Oryzias latipes	59.91	0.00e+00	3391.00
IUUC-Oga-088816	Otolemur garnettii	92.56	0.00e+00	5579.00
IUUC-Oar-089618	Ovis aries	92.63	0.00e+00	5575.00
IUUC-Pan-092151	Papio anubis	98.13	0.00e+00	5962.00
IUUC-Psi-093590	Pelodiscus sinensis	78.37	0.00e+00	4658.00
IUUC-Pfo-097445	Poecilia formosa	60.01	0.00e+00	3381.00
IUUC-Pab-098237	Pongo abelii	97.64	0.00e+00	5908.00
IUUC-Pop-098812	Populus trichocarpa	33.33	2.00e-29	126.00
IUUC-Pca-101008	Procavia capensis	90.47	0.00e+00	1624.00
IUUC-Ppe-101610	Prunus persica	29.55	6.00e-36	147.00
IUUC-Pva-102348	Pteropus vampyrus	87.25	0.00e+00	3417.00
IUUC-Rno-105076	Rattus norvegicus	89.78	0.00e+00	5306.00
IUUC-Sha-106860	Sarcophilus harrisii	84.78	0.00e+00	5140.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	27.68	3.00e-25	110.00
IUUC-Sar-113751	Sorex araneus	88.69	0.00e+00	2518.00
IUUC-Ssc-116371	Sus scrofa	92.37	0.00e+00	5594.00
IUUC-Tgu-117108	Taeniopygia guttata	76.47	0.00e+00	4511.00
IUUC-Tru-117628	Takifugu rubripes	60.31	0.00e+00	3401.00
IUUC-Tsy-118837	Tarsius syrichta	87.58	0.00e+00	3476.00
IUUC-Tca-121789	Theobroma cacao	27.10	6.00e-32	134.00
IUUC-Tae-125726	Triticum aestivum	29.01	3.00e-33	139.00
IUUC-Tbe-127953	Tupaia belangeri	90.50	0.00e+00	2973.00
IUUC-Ttr-128991	Tursiops truncatus	91.58	0.00e+00	4726.00
IUUC-Vpa-130309	Vicugna pacos	90.92	0.00e+00	3127.00
IUUC-Xtr-132582	Xenopus tropicalis	70.66	0.00e+00	4256.00
IUUC-Xma-134109	Xiphophorus maculatus	60.48	0.00e+00	3446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence