iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088616

Ensembl Protein ID

ENSOGAP00000005807.2

UniProt Accession

H0WUB5; H0WUB5_OTOGA

Genbank Protein ID

ENSOGAP00000005807

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03036006

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000006495.2	ENSOGAT00000006498.2	ENSOGAP00000005807.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-22	76.4	338	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           +++v+cl+f   +++ll++G   gt+kvW l+t
   Q: 338  ESPVYCLEFnsqQTGLLAAGDAKGTVKVWQLST 370
           689******98544***************9877 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

QVSCLYTLCY PPAQGQGLHV TSISWNTTGS VVACAYGRLD DGDWSTLKSF VCAWNLDRRG 60
LNPQQPSAVV EVPSAVLCLA FHPTQPSHVA GGLYSGEVLV WDMSRTEDPL LWRTGLTDDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTGTCTT GTCTGTACAC CCTGTGCTAC CCCCCAGCCC AAGGGCAAGG TCTGCATGTA 60
ACCAGCATTT CCTGGAACAC CACTGGCTCT GTGGTGGCCT GTGCATATGG CCGGTGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0005829--C:cytosol
GO:0060271--P:cilium assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	91.05	0.00e+00	687.00
IUUC-Apl-004015	Anas platyrhynchos	70.36	5.00e-156	544.00
IUUC-Ame-010762	Astyanax mexicanus	53.32	2.00e-119	422.00
IUUC-Bta-013392	Bos taurus	90.28	0.00e+00	733.00
IUUC-Cja-019374	Callithrix jacchus	88.49	0.00e+00	682.00
IUUC-Cfa-020365	Canis familiaris	91.30	0.00e+00	689.00
IUUC-Csa-023810	Chlorocebus sabaeus	90.28	0.00e+00	722.00
IUUC-Cho-024515	Choloepus hoffmanni	80.75	5.00e-171	593.00
IUUC-Cin-025690	Ciona intestinalis	31.40	7.00e-47	181.00
IUUC-Csv-026220	Ciona savignyi	29.37	3.00e-42	166.00
IUUC-Dre-028439	Danio rerio	54.31	3.00e-123	435.00
IUUC-Dno-029916	Dasypus novemcinctus	89.54	0.00e+00	719.00
IUUC-Dor-030853	Dipodomys ordii	88.49	0.00e+00	728.00
IUUC-Eca-033204	Equus caballus	90.28	0.00e+00	723.00
IUUC-Eeu-035352	Erinaceus europaeus	25.79	4.00e-23	103.00
IUUC-Fca-036470	Felis catus	90.77	0.00e+00	689.00
IUUC-Fal-037484	Ficedula albicollis	67.87	8.00e-163	566.00
IUUC-Gmo-039252	Gadus morhua	51.37	5.00e-117	414.00
IUUC-Gga-040701	Gallus gallus	67.61	8.00e-153	533.00
IUUC-Gac-041440	Gasterosteus aculeatus	52.81	1.00e-118	420.00
IUUC-Ggo-044509	Gorilla gorilla	90.28	0.00e+00	723.00
IUUC-Hsa-046030	Homo sapiens	90.26	0.00e+00	721.00
IUUC-Itr-048001	Ictidomys tridecemlineatus	88.49	0.00e+00	712.00
IUUC-Lch-050603	Latimeria chalumnae	63.59	1.00e-149	522.00
IUUC-Loc-052914	Lepisosteus oculatus	52.67	3.00e-108	385.00
IUUC-Laf-053957	Loxodonta africana	85.15	0.00e+00	660.00
IUUC-Mcc-054805	Macaca mulatta	90.28	0.00e+00	725.00
IUUC-Meu-056115	Macropus eugenii	85.17	0.00e+00	704.00
IUUC-Mga-059377	Meleagris gallopavo	67.61	2.00e-160	558.00
IUUC-Mmr-061203	Microcebus murinus	92.84	0.00e+00	750.00
IUUC-Mdo-062646	Monodelphis domestica	85.17	0.00e+00	680.00
IUUC-Mmu-063156	Mus musculus	87.72	0.00e+00	685.00
IUUC-Mpu-065923	Mustela putorius furo	86.73	0.00e+00	724.00
IUUC-Mlu-067705	Myotis lucifugus	90.28	0.00e+00	734.00
IUUC-Nle-069635	Nomascus leucogenys	90.54	0.00e+00	725.00
IUUC-Opr-070939	Ochotona princeps	70.26	8.00e-153	533.00
IUUC-Ont-072205	Oreochromis niloticus	50.64	2.00e-114	405.00
IUUC-Oan-073427	Ornithorhynchus anatinus	77.81	3.00e-170	591.00
IUUC-Ocu-074234	Oryctolagus cuniculus	89.77	0.00e+00	697.00
IUUC-Ola-086461	Oryzias latipes	52.28	1.00e-116	413.00
IUUC-Ptr-090563	Pan troglodytes	90.28	0.00e+00	723.00
IUUC-Pan-092105	Papio anubis	90.28	0.00e+00	721.00
IUUC-Psi-093169	Pelodiscus sinensis	69.67	6.00e-169	587.00
IUUC-Pma-094688	Petromyzon marinus	39.69	2.00e-80	293.00
IUUC-Pfo-096136	Poecilia formosa	51.91	1.00e-108	386.00
IUUC-Pab-098286	Pongo abelii	89.00	0.00e+00	709.00
IUUC-Pca-100577	Procavia capensis	82.61	0.00e+00	638.00
IUUC-Pva-103194	Pteropus vampyrus	90.79	0.00e+00	736.00
IUUC-Rno-105958	Rattus norvegicus	87.47	0.00e+00	712.00
IUUC-Sha-107438	Sarcophilus harrisii	85.42	0.00e+00	708.00
IUUC-Ssc-116210	Sus scrofa	88.24	0.00e+00	716.00
IUUC-Tgu-116704	Taeniopygia guttata	67.61	1.00e-160	559.00
IUUC-Tru-117530	Takifugu rubripes	48.74	8.00e-103	367.00
IUUC-Tni-120848	Tetraodon nigroviridis	45.59	1.00e-85	310.00
IUUC-Ttr-128697	Tursiops truncatus	91.05	0.00e+00	731.00
IUUC-Xtr-132843	Xenopus tropicalis	64.63	1.00e-154	539.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence