iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000012129.2	ENSSTOT00000025861.1	ENSSTOP00000019533.1
ENSSTOG00000012129.2	ENSSTOT00000012154.2	ENSSTOP00000010895.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-15	55.9	369	397

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf..sdtllvsGsdDgtikvWDlrtgvl 35
           +++  sd++lv+G+ Dg+++vW ++tg l
   Q: 369  IKWrpSDDYLVVGCSDGSVYVWQMDTGAL 397
           679*777****************999865 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MQDTEPIFEE ESKPIYCQNC QSISFCAFTQ RSLLVVCSKY WRVFDAGDYS LLCSGPSENG 60
QTWTGGDFVS ADKVIIWTEN GQSYIYKLPA SCLPASDSFR SDVGKAVENL IPPVQHSLLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCAAAGCA GCAAAACAGG AAGCCCAAAC GTCTTTGTTG CTCATACATT TCCCCAGGAA 60
AACATTTCTC TTATAGTAAA AATGTAGATG TTTAATCTCT GCTGCTTCTG ATCTGGTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	25.31	3.00e-14	73.90
IUUC-Aml-001481	Ailuropoda melanoleuca	98.28	0.00e+00	962.00
IUUC-Atr-002981	Amborella trichopoda	25.00	8.00e-09	56.60
IUUC-Apl-003943	Anas platyrhynchos	89.27	0.00e+00	875.00
IUUC-Aca-005145	Anolis carolinensis	89.57	0.00e+00	878.00
IUUC-Ame-011180	Astyanax mexicanus	78.81	0.00e+00	765.00
IUUC-Bta-012912	Bos taurus	96.78	0.00e+00	955.00
IUUC-Bol-016538	Brassica oleracea	29.49	5.00e-08	53.90
IUUC-Bra-018098	Brassica rapa	26.83	3.00e-08	53.90
IUUC-Cel-018565	Caenorhabditis elegans	43.04	2.00e-53	204.00
IUUC-Cja-019970	Callithrix jacchus	97.20	0.00e+00	953.00
IUUC-Cfa-020677	Canis familiaris	98.50	0.00e+00	967.00
IUUC-Cpo-021408	Cavia porcellus	98.28	0.00e+00	964.00
IUUC-Csa-023786	Chlorocebus sabaeus	97.85	0.00e+00	963.00
IUUC-Cho-024612	Choloepus hoffmanni	99.06	2.00e-126	447.00
IUUC-Cin-025255	Ciona intestinalis	43.60	1.00e-104	374.00
IUUC-Csv-026361	Ciona savignyi	42.86	3.00e-101	363.00
IUUC-Dre-027951	Danio rerio	80.65	0.00e+00	685.00
IUUC-Dno-029072	Dasypus novemcinctus	96.38	0.00e+00	951.00
IUUC-Dor-030771	Dipodomys ordii	97.97	0.00e+00	820.00
IUUC-Dme-031768	Drosophila melanogaster	50.71	1.00e-126	447.00
IUUC-Ete-032492	Echinops telfairi	87.34	0.00e+00	837.00
IUUC-Eca-033496	Equus caballus	97.64	0.00e+00	959.00
IUUC-Eeu-034689	Erinaceus europaeus	89.55	1.00e-155	543.00
IUUC-Fca-035530	Felis catus	97.42	0.00e+00	962.00
IUUC-Fal-037238	Ficedula albicollis	85.84	0.00e+00	847.00
IUUC-Gmo-039528	Gadus morhua	79.63	0.00e+00	744.00
IUUC-Gga-041043	Gallus gallus	90.34	0.00e+00	887.00
IUUC-Gac-042524	Gasterosteus aculeatus	80.09	0.00e+00	779.00
IUUC-Ggo-045112	Gorilla gorilla	97.22	0.00e+00	953.00
IUUC-Hsa-046732	Homo sapiens	97.42	0.00e+00	957.00
IUUC-Lch-050643	Latimeria chalumnae	86.75	0.00e+00	853.00
IUUC-Lpe-051544	Leersia perrieri	25.38	1.00e-11	66.20
IUUC-Loc-051774	Lepisosteus oculatus	72.22	0.00e+00	695.00
IUUC-Laf-054349	Loxodonta africana	95.49	0.00e+00	918.00
IUUC-Mcc-055800	Macaca mulatta	97.85	0.00e+00	964.00
IUUC-Meu-056091	Macropus eugenii	97.09	3.00e-97	350.00
IUUC-Mtr-058676	Medicago truncatula	26.37	2.00e-12	68.90
IUUC-Mga-060096	Meleagris gallopavo	63.14	5.00e-159	554.00
IUUC-Mmr-061271	Microcebus murinus	98.50	0.00e+00	967.00
IUUC-Mdo-062622	Monodelphis domestica	92.47	0.00e+00	908.00
IUUC-Mmu-063262	Mus musculus	96.78	0.00e+00	954.00
IUUC-Mac-065659	Musa acuminata	24.53	2.00e-08	55.50
IUUC-Mpu-066523	Mustela putorius furo	97.00	0.00e+00	943.00
IUUC-Mlu-067288	Myotis lucifugus	94.03	0.00e+00	932.00
IUUC-Nle-069610	Nomascus leucogenys	97.85	0.00e+00	964.00
IUUC-Opr-070413	Ochotona princeps	96.45	0.00e+00	807.00
IUUC-Ont-072199	Oreochromis niloticus	80.53	0.00e+00	782.00
IUUC-Oan-073095	Ornithorhynchus anatinus	92.70	0.00e+00	910.00
IUUC-Ocu-074257	Oryctolagus cuniculus	96.78	0.00e+00	952.00
IUUC-Oba-075713	Oryza barthii	26.40	2.00e-12	68.90
IUUC-Obr-076894	Oryza brachyantha	26.29	2.00e-11	65.50
IUUC-Ogl-077521	Oryza glaberrima	26.40	2.00e-12	68.60
IUUC-Ogu-078103	Oryza glumaepatula	26.40	5.00e-12	67.40
IUUC-Oin-080169	Oryza indica	26.40	2.00e-12	68.60
IUUC-Olo-080818	Oryza longistaminata	24.18	9.00e-13	69.30
IUUC-Ome-081902	Oryza meridionalis	26.40	3.00e-12	68.20
IUUC-Oni-082333	Oryza nivara	26.80	3.00e-12	67.80
IUUC-Opu-083952	Oryza punctata	26.90	2.00e-12	68.90
IUUC-Oru-085112	Oryza rufipogon	26.40	2.00e-12	68.60
IUUC-Osa-085615	Oryza sativa	26.40	1.00e-12	68.20
IUUC-Ola-087177	Oryzias latipes	77.59	0.00e+00	746.00
IUUC-Oga-088290	Otolemur garnettii	96.56	0.00e+00	944.00
IUUC-Oar-089575	Ovis aries	97.00	0.00e+00	951.00
IUUC-Ptr-091041	Pan troglodytes	98.07	0.00e+00	964.00
IUUC-Pan-092048	Papio anubis	97.85	0.00e+00	964.00
IUUC-Psi-093637	Pelodiscus sinensis	91.38	0.00e+00	889.00
IUUC-Pma-094714	Petromyzon marinus	64.96	6.00e-172	597.00
IUUC-Pfo-096529	Poecilia formosa	80.13	0.00e+00	769.00
IUUC-Pab-098194	Pongo abelii	98.07	0.00e+00	964.00
IUUC-Pop-099546	Populus trichocarpa	24.38	5.00e-09	57.40
IUUC-Pca-100950	Procavia capensis	98.63	8.00e-42	166.00
IUUC-Ppe-101653	Prunus persica	27.15	3.00e-09	58.20
IUUC-Pva-102803	Pteropus vampyrus	93.80	0.00e+00	917.00
IUUC-Rno-105904	Rattus norvegicus	94.85	0.00e+00	937.00
IUUC-Sha-106926	Sarcophilus harrisii	74.73	0.00e+00	691.00
IUUC-Smo-108766	Selaginella moellendorffii	26.51	4.00e-12	67.40
IUUC-Sit-110049	Setaria italica	26.51	6.00e-12	66.20
IUUC-Sly-111516	Solanum lycopersicum	26.42	5.00e-10	60.50
IUUC-Stu-111982	Solanum tuberosum	26.25	7.00e-10	60.10
IUUC-Sar-113730	Sorex araneus	92.92	0.00e+00	907.00
IUUC-Sbi-114887	Sorghum bicolor	27.88	1.00e-12	68.90
IUUC-Ssc-116213	Sus scrofa	97.64	0.00e+00	951.00
IUUC-Tgu-117297	Taeniopygia guttata	87.98	0.00e+00	873.00
IUUC-Tru-117887	Takifugu rubripes	78.19	0.00e+00	769.00
IUUC-Tsy-118970	Tarsius syrichta	91.85	0.00e+00	896.00
IUUC-Tni-119791	Tetraodon nigroviridis	77.16	0.00e+00	746.00
IUUC-Tca-121391	Theobroma cacao	26.79	5.00e-12	67.40
IUUC-Tae-123628	Triticum aestivum	27.36	3.00e-15	78.20
IUUC-Tur-125959	Triticum urartu	27.36	2.00e-15	77.80
IUUC-Tbe-127847	Tupaia belangeri	87.97	0.00e+00	778.00
IUUC-Ttr-128200	Tursiops truncatus	97.42	0.00e+00	964.00
IUUC-Vpa-130178	Vicugna pacos	98.28	0.00e+00	964.00
IUUC-Xtr-132699	Xenopus tropicalis	86.91	0.00e+00	870.00
IUUC-Xma-133180	Xiphophorus maculatus	79.42	0.00e+00	776.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence