iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028530

Ensembl Protein ID

ENSDARP00000142632.1

UniProt Accession

A0A1D5NS24; A0A1D5NS24_DANRE

Genbank Protein ID

ENSDARP00000142632

Protein Name

WD repeat domain 60

Genbank Nucleotide ID

CU467647

Gene Name

wdr60

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000076934.4	ENSDART00000173634.1	ENSDARP00000142632.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-06	28.1	683	715

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd..tllvsGsdDgtikvWDlrtg 33
           ++v c++f ++  tl+ +G+  g++ vWDlr++
   Q: 683  SEVKCCCFsPGkvTLVFAGTAVGSVIVWDLREH 715
           789******777899**************9976 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MRSVKKITKE DTWRSDDLKV HIQAHNEESR RRSKRVEEHR KHRDGESEDR RHRDPDRDPR 60
REKEKRRERE GSKHRDPERD RNQDIKREDV REDRHKERRR EREKARHGDG DEDEKRYNRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGATGGCGG AGGAAAAAGC TGTCAACACA AACTTACGAT TGTTGGATAA ATAAGAGAAA 60
GTGGATCCCT GAAGTAATGC GCTCTGTGAA GGTATAGCAA CTCTTAACCC GTATGATAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001741	Ailuropoda melanoleuca	48.38	8.00e-170	591.00
IUUC-Apl-003689	Anas platyrhynchos	50.62	0.00e+00	666.00
IUUC-Aca-004966	Anolis carolinensis	52.40	0.00e+00	650.00
IUUC-Ame-011562	Astyanax mexicanus	46.31	6.00e-135	475.00
IUUC-Bta-013100	Bos taurus	46.93	7.00e-173	601.00
IUUC-Cja-019521	Callithrix jacchus	47.05	1.00e-166	580.00
IUUC-Cfa-020943	Canis familiaris	48.01	3.00e-162	566.00
IUUC-Cho-024500	Choloepus hoffmanni	49.56	4.00e-100	359.00
IUUC-Dno-029442	Dasypus novemcinctus	45.56	3.00e-167	582.00
IUUC-Eca-033951	Equus caballus	47.42	2.00e-175	610.00
IUUC-Fca-036542	Felis catus	50.09	1.00e-159	557.00
IUUC-Fal-037079	Ficedula albicollis	51.07	0.00e+00	640.00
IUUC-Gac-041396	Gasterosteus aculeatus	59.34	0.00e+00	731.00
IUUC-Ggo-045638	Gorilla gorilla	45.54	9.00e-162	564.00
IUUC-Hsa-046371	Homo sapiens	47.05	2.00e-169	590.00
IUUC-Itr-049031	Ictidomys tridecemlineatus	47.28	1.00e-165	577.00
IUUC-Lch-049862	Latimeria chalumnae	51.58	0.00e+00	689.00
IUUC-Loc-052637	Lepisosteus oculatus	58.59	0.00e+00	720.00
IUUC-Laf-053470	Loxodonta africana	46.82	1.00e-165	577.00
IUUC-Mcc-055753	Macaca mulatta	47.35	5.00e-180	625.00
IUUC-Mga-059230	Meleagris gallopavo	50.68	1.00e-178	620.00
IUUC-Mmr-061703	Microcebus murinus	41.97	6.00e-145	508.00
IUUC-Mmu-064346	Mus musculus	46.96	1.00e-165	577.00
IUUC-Mpu-066650	Mustela putorius furo	47.87	6.00e-156	545.00
IUUC-Nle-069413	Nomascus leucogenys	46.83	2.00e-166	580.00
IUUC-Opr-071033	Ochotona princeps	48.27	9.00e-170	591.00
IUUC-Ont-071388	Oreochromis niloticus	59.97	0.00e+00	834.00
IUUC-Oan-072714	Ornithorhynchus anatinus	50.00	0.00e+00	640.00
IUUC-Ocu-074557	Oryctolagus cuniculus	46.89	1.00e-167	583.00
IUUC-Oga-088938	Otolemur garnettii	46.64	2.00e-160	560.00
IUUC-Oar-090053	Ovis aries	42.91	7.00e-129	455.00
IUUC-Pan-091852	Papio anubis	48.66	1.00e-165	577.00
IUUC-Psi-093781	Pelodiscus sinensis	51.11	0.00e+00	629.00
IUUC-Pfo-096078	Poecilia formosa	58.41	0.00e+00	748.00
IUUC-Pab-097947	Pongo abelii	47.50	1.00e-170	594.00
IUUC-Rno-105970	Rattus norvegicus	47.35	5.00e-164	572.00
IUUC-Tgu-117448	Taeniopygia guttata	51.38	0.00e+00	645.00
IUUC-Tni-120297	Tetraodon nigroviridis	56.26	0.00e+00	735.00
IUUC-Xtr-132946	Xenopus tropicalis	49.69	8.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence