iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048110

Ensembl Protein ID

ENSSTOP00000015755.1

UniProt Accession

I3MUG0; I3MUG0_ICTTR

Genbank Protein ID

ENSSTOP00000015755

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01047357

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000024223.1	ENSSTOT00000025929.1	ENSSTOP00000015755.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.30e-26	88.8	126	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           H++++++l + +++ l++G d g +++WDlr+  +
   Q: 126  HSAPINSLLLvDENVLATGDDTGGVRLWDLRKEGP 160
           9*******77555*****************98766 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MESTCAERPA EDESEEENPD STESPSRIRD TPEDIVLEAP ASGLAFHPTR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKSCRAV VFSEDGQKLV TVSKDKAIHV LDVEQGRLER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCGTGCTGG GGCACAACTT CCGCGTTGAG CCTACTTCGC TTGTCGCTAG CCAGCCGGCA 60
ATTTCGCCTC CAAATCATCC CCAGCATGGA AAGCACGTGT GCGGAGAGAC CCGCCGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	37.02	2.00e-49	189.00
IUUC-Aml-001768	Ailuropoda melanoleuca	91.10	0.00e+00	725.00
IUUC-Atr-002764	Amborella trichopoda	34.87	2.00e-22	97.80
IUUC-Apl-003880	Anas platyrhynchos	65.68	6.00e-119	421.00
IUUC-Aca-005060	Anolis carolinensis	66.93	3.00e-152	532.00
IUUC-Aly-006484	Arabidopsis lyrata	37.16	7.00e-51	194.00
IUUC-Ath-006652	Arabidopsis thaliana	39.32	4.00e-59	221.00
IUUC-Bta-013497	Bos taurus	90.84	0.00e+00	697.00
IUUC-Bdi-014378	Brachypodium distachyon	37.79	6.00e-57	214.00
IUUC-Bol-016352	Brassica oleracea	39.66	4.00e-61	228.00
IUUC-Bra-017103	Brassica rapa	39.66	2.00e-61	229.00
IUUC-Cel-018192	Caenorhabditis elegans	26.14	1.00e-16	80.10
IUUC-Cja-018792	Callithrix jacchus	88.54	0.00e+00	675.00
IUUC-Cfa-020739	Canis familiaris	92.78	0.00e+00	701.00
IUUC-Cpo-022331	Cavia porcellus	92.67	0.00e+00	704.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	40.96	1.00e-36	145.00
IUUC-Csa-023414	Chlorocebus sabaeus	90.26	0.00e+00	716.00
IUUC-Cho-024600	Choloepus hoffmanni	91.07	0.00e+00	634.00
IUUC-Cin-025565	Ciona intestinalis	39.34	3.00e-64	238.00
IUUC-Csv-026294	Ciona savignyi	37.85	3.00e-63	235.00
IUUC-Cne-026979	Cryptococcus neoformans	32.65	3.00e-40	159.00
IUUC-Cme-027192	Cyanidioschyzon merolae	25.23	3.00e-21	95.90
IUUC-Dre-028492	Danio rerio	63.89	2.00e-130	458.00
IUUC-Dno-030050	Dasypus novemcinctus	87.70	0.00e+00	636.00
IUUC-Dor-030386	Dipodomys ordii	80.99	2.00e-169	588.00
IUUC-Dme-032012	Drosophila melanogaster	35.59	4.00e-60	225.00
IUUC-Ete-032491	Echinops telfairi	88.56	0.00e+00	673.00
IUUC-Eca-033583	Equus caballus	93.11	0.00e+00	707.00
IUUC-Eeu-034976	Erinaceus europaeus	94.46	2.00e-174	603.00
IUUC-Fca-036417	Felis catus	88.22	0.00e+00	679.00
IUUC-Gmo-039505	Gadus morhua	65.98	3.00e-140	491.00
IUUC-Ggr-039978	Gaeumannomyces graminis	23.58	2.00e-12	66.60
IUUC-Gga-040732	Gallus gallus	67.79	2.00e-145	508.00
IUUC-Gac-041313	Gasterosteus aculeatus	65.18	3.00e-137	481.00
IUUC-Gma-044122	Glycine max	40.34	3.00e-59	221.00
IUUC-Ggo-044748	Gorilla gorilla	91.12	0.00e+00	721.00
IUUC-Hsa-046943	Homo sapiens	90.08	0.00e+00	712.00
IUUC-Hvu-047659	Hordeum vulgare	37.19	8.00e-56	210.00
IUUC-Lch-050331	Latimeria chalumnae	59.61	3.00e-114	404.00
IUUC-Lpe-051193	Leersia perrieri	39.08	9.00e-60	223.00
IUUC-Loc-051946	Lepisosteus oculatus	67.75	5.00e-136	478.00
IUUC-Laf-054035	Loxodonta africana	90.06	0.00e+00	672.00
IUUC-Mcc-055285	Macaca mulatta	90.66	2.00e-96	343.00
IUUC-Meu-056596	Macropus eugenii	84.50	3.00e-172	597.00
IUUC-Mor-056995	Magnaporthe oryzae	24.45	1.00e-14	73.60
IUUC-Mtr-058637	Medicago truncatula	40.07	1.00e-58	220.00
IUUC-Mga-059839	Meleagris gallopavo	70.61	2.00e-95	343.00
IUUC-Mdo-062868	Monodelphis domestica	83.71	1.00e-175	609.00
IUUC-Mmu-064305	Mus musculus	88.80	0.00e+00	679.00
IUUC-Mac-065041	Musa acuminata	38.03	1.00e-57	216.00
IUUC-Mpu-066779	Mustela putorius furo	91.10	0.00e+00	681.00
IUUC-Mlu-067223	Myotis lucifugus	91.44	0.00e+00	665.00
IUUC-Ncr-068919	Neurospora crassa	26.58	4.00e-09	55.50
IUUC-Nle-069852	Nomascus leucogenys	90.34	0.00e+00	677.00
IUUC-Ont-072452	Oreochromis niloticus	67.26	1.00e-140	492.00
IUUC-Oan-073163	Ornithorhynchus anatinus	81.38	1.00e-65	241.00
IUUC-Ocu-074628	Oryctolagus cuniculus	93.11	0.00e+00	702.00
IUUC-Oba-075868	Oryza barthii	38.38	5.00e-57	214.00
IUUC-Obr-076768	Oryza brachyantha	38.73	2.00e-58	219.00
IUUC-Ogl-077424	Oryza glaberrima	39.08	1.00e-59	223.00
IUUC-Ogu-078847	Oryza glumaepatula	38.73	2.00e-57	216.00
IUUC-Oin-079495	Oryza indica	39.08	1.00e-59	223.00
IUUC-Olo-080268	Oryza longistaminata	38.73	2.00e-57	215.00
IUUC-Ome-081709	Oryza meridionalis	38.85	2.00e-51	196.00
IUUC-Oni-082749	Oryza nivara	39.08	1.00e-59	223.00
IUUC-Opu-084023	Oryza punctata	32.39	6.00e-40	157.00
IUUC-Oru-084764	Oryza rufipogon	38.73	2.00e-57	216.00
IUUC-Osa-086009	Oryza sativa	39.08	2.00e-59	222.00
IUUC-Ola-086463	Oryzias latipes	60.70	1.00e-130	459.00
IUUC-Olu-087897	Ostreococcus lucimarinus	32.98	3.00e-45	175.00
IUUC-Oga-089114	Otolemur garnettii	90.51	0.00e+00	693.00
IUUC-Ptr-090556	Pan troglodytes	90.34	0.00e+00	714.00
IUUC-Pan-092828	Papio anubis	90.08	0.00e+00	714.00
IUUC-Psi-093609	Pelodiscus sinensis	67.73	4.00e-122	432.00
IUUC-Pma-094413	Petromyzon marinus	55.85	3.00e-103	368.00
IUUC-Ppa-095422	Physcomitrella patens	41.47	2.00e-67	248.00
IUUC-Pfo-096389	Poecilia formosa	65.77	1.00e-132	466.00
IUUC-Pab-098095	Pongo abelii	90.86	0.00e+00	717.00
IUUC-Pop-099612	Populus trichocarpa	38.16	1.00e-54	206.00
IUUC-Pca-100408	Procavia capensis	90.61	0.00e+00	676.00
IUUC-Ppe-101931	Prunus persica	35.21	5.00e-55	207.00
IUUC-Pva-102549	Pteropus vampyrus	90.91	0.00e+00	682.00
IUUC-Rno-105079	Rattus norvegicus	92.01	0.00e+00	701.00
IUUC-Sha-107299	Sarcophilus harrisii	84.96	5.00e-163	568.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.37	3.00e-22	99.00
IUUC-Spo-108122	Schizosaccharomyces pombe	30.88	2.00e-27	116.00
IUUC-Smo-109613	Selaginella moellendorffii	39.51	1.00e-51	196.00
IUUC-Sit-110263	Setaria italica	38.03	1.00e-57	216.00
IUUC-Sly-110988	Solanum lycopersicum	37.10	2.00e-53	202.00
IUUC-Stu-112713	Solanum tuberosum	37.46	2.00e-54	205.00
IUUC-Sbi-114617	Sorghum bicolor	36.97	3.00e-55	208.00
IUUC-Sre-115136	Sporisorium reilianum	31.33	6.00e-13	68.60
IUUC-Ssc-116268	Sus scrofa	91.33	0.00e+00	707.00
IUUC-Tgu-116720	Taeniopygia guttata	60.87	8.00e-89	321.00
IUUC-Tru-117977	Takifugu rubripes	66.96	1.00e-133	469.00
IUUC-Tsy-119121	Tarsius syrichta	88.58	6.00e-115	406.00
IUUC-Tni-119904	Tetraodon nigroviridis	69.64	1.00e-135	476.00
IUUC-Tca-121718	Theobroma cacao	40.64	2.00e-60	226.00
IUUC-Tae-124364	Triticum aestivum	37.89	1.00e-56	213.00
IUUC-Tme-126922	Tuber melanosporum	22.16	4.00e-13	69.70
IUUC-Tbe-127276	Tupaia belangeri	92.26	5.00e-154	536.00
IUUC-Uma-129505	Ustilago maydis	32.52	1.00e-13	71.20
IUUC-Vpa-130276	Vicugna pacos	92.43	3.00e-135	473.00
IUUC-Vvi-131377	Vitis vinifera	39.22	2.00e-57	218.00
IUUC-Xtr-132529	Xenopus tropicalis	69.28	1.00e-148	520.00
IUUC-Xma-134177	Xiphophorus maculatus	65.48	3.00e-125	441.00
IUUC-Yli-134665	Yarrowia lipolytica	24.32	2.00e-08	52.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence