iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000045374.18	ENSMUST00000117392.8	ENSMUSP00000113939.2
ENSMUSG00000045374.18	ENSMUST00000132442.1	ENSMUSP00000120605.1
ENSMUSG00000045374.18	ENSMUST00000173320.7	ENSMUSP00000134266.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Post-translational Modifications (PTMs)
CPLM	PHOSIDA	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-12	48.4	1639	1669

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f.sdtllvsGsdDgtikvWD 29
           gHt+ v c+a + s+++++sGs D t+++W 
   Q: 1639 GHTGAVKCVAaLsSEDFFLSGSKDRTVRLWP 1669
           8********856655***************7 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

XAQGSRRRKV VLTAGSEGWS PSSGPDMEEL LRSVERDLNI DARQLALAPG GTHVVALVST 60
RWLASLRERR LGPCPRAEGL GEAEVRTLLQ RSVQRLPPGW TRVEVHGLRK RRLSYPLGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGATCACA TGACCCGCAT CAGCTGACCC GTCACGGTGG AGCTCAGCGC TGGTGCTTCG 60
CGCTCCCCGC CCTGCTGCGC CCCGGAGCGC AGGACCCTGC GGAGGGGTAA GAAAACCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR000409--BEACH_dom
IPR011009--Kinase-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001149	Aegilops tauschii	38.87	9.00e-74	272.00
IUUC-Aml-001469	Ailuropoda melanoleuca	85.71	0.00e+00	3021.00
IUUC-Atr-003087	Amborella trichopoda	41.37	2.00e-74	275.00
IUUC-Apl-003320	Anas platyrhynchos	65.78	0.00e+00	892.00
IUUC-Aca-004757	Anolis carolinensis	65.75	5.00e-120	424.00
IUUC-Ath-007144	Arabidopsis thaliana	40.56	4.00e-71	264.00
IUUC-Ame-011832	Astyanax mexicanus	54.58	0.00e+00	1920.00
IUUC-Bta-012569	Bos taurus	85.25	0.00e+00	1410.00
IUUC-Bdi-014656	Brachypodium distachyon	39.85	4.00e-74	273.00
IUUC-Bol-016288	Brassica oleracea	40.00	1.00e-73	272.00
IUUC-Bra-017480	Brassica rapa	37.11	1.00e-56	216.00
IUUC-Cel-018315	Caenorhabditis elegans	47.74	9.00e-63	236.00
IUUC-Cja-019992	Callithrix jacchus	86.63	0.00e+00	1334.00
IUUC-Cfa-020689	Canis familiaris	85.71	0.00e+00	3159.00
IUUC-Cpo-021489	Cavia porcellus	89.19	0.00e+00	1423.00
IUUC-Csa-023209	Chlorocebus sabaeus	86.46	0.00e+00	3118.00
IUUC-Csv-025966	Ciona savignyi	30.17	8.00e-102	366.00
IUUC-Dre-027665	Danio rerio	51.63	0.00e+00	1857.00
IUUC-Dno-029751	Dasypus novemcinctus	84.67	0.00e+00	3073.00
IUUC-Dor-030379	Dipodomys ordii	88.76	0.00e+00	1466.00
IUUC-Dme-032002	Drosophila melanogaster	34.94	8.00e-104	372.00
IUUC-Eca-033529	Equus caballus	87.44	0.00e+00	1446.00
IUUC-Eeu-034915	Erinaceus europaeus	85.81	0.00e+00	1482.00
IUUC-Fca-036329	Felis catus	86.52	0.00e+00	3159.00
IUUC-Fal-037479	Ficedula albicollis	65.15	0.00e+00	1328.00
IUUC-Gmo-038831	Gadus morhua	70.23	4.00e-142	497.00
IUUC-Gga-040649	Gallus gallus	64.49	0.00e+00	1436.00
IUUC-Gac-041852	Gasterosteus aculeatus	69.74	3.00e-143	501.00
IUUC-Gma-043542	Glycine max	39.85	2.00e-73	271.00
IUUC-Ggo-044633	Gorilla gorilla	86.67	0.00e+00	3074.00
IUUC-Hsa-045906	Homo sapiens	86.56	0.00e+00	3097.00
IUUC-Hvu-047635	Hordeum vulgare	37.60	1.00e-71	265.00
IUUC-Itr-048923	Ictidomys tridecemlineatus	88.20	0.00e+00	3183.00
IUUC-Lch-049479	Latimeria chalumnae	58.74	0.00e+00	2181.00
IUUC-Lpe-051541	Leersia perrieri	38.87	9.00e-75	276.00
IUUC-Loc-051885	Lepisosteus oculatus	59.40	0.00e+00	848.00
IUUC-Laf-053778	Loxodonta africana	86.28	0.00e+00	3243.00
IUUC-Mcc-055759	Macaca mulatta	88.78	0.00e+00	1438.00
IUUC-Meu-056896	Macropus eugenii	81.21	0.00e+00	1161.00
IUUC-Mtr-058486	Medicago truncatula	40.10	2.00e-66	248.00
IUUC-Mga-059219	Meleagris gallopavo	69.81	0.00e+00	1006.00
IUUC-Mmr-061010	Microcebus murinus	87.36	0.00e+00	3142.00
IUUC-Mdo-062572	Monodelphis domestica	74.70	0.00e+00	2636.00
IUUC-Mpu-066257	Mustela putorius furo	89.53	0.00e+00	1261.00
IUUC-Mlu-068111	Myotis lucifugus	86.79	0.00e+00	1436.00
IUUC-Nle-069919	Nomascus leucogenys	84.18	0.00e+00	1739.00
IUUC-Opr-071204	Ochotona princeps	79.62	0.00e+00	861.00
IUUC-Ont-072131	Oreochromis niloticus	54.26	0.00e+00	855.00
IUUC-Oan-072888	Ornithorhynchus anatinus	74.48	0.00e+00	1097.00
IUUC-Ocu-074626	Oryctolagus cuniculus	86.07	0.00e+00	3105.00
IUUC-Oba-075734	Oryza barthii	38.68	8.00e-72	266.00
IUUC-Obr-076493	Oryza brachyantha	38.89	9.00e-73	269.00
IUUC-Ogl-077248	Oryza glaberrima	38.68	8.00e-72	266.00
IUUC-Ogu-077961	Oryza glumaepatula	38.99	9.00e-72	266.00
IUUC-Oin-079930	Oryza indica	37.56	1.00e-73	272.00
IUUC-Olo-080512	Oryza longistaminata	38.33	1.00e-67	252.00
IUUC-Ome-081701	Oryza meridionalis	38.68	4.00e-73	270.00
IUUC-Oni-082138	Oryza nivara	37.31	3.00e-72	268.00
IUUC-Opu-083350	Oryza punctata	38.27	3.00e-72	268.00
IUUC-Oru-085133	Oryza rufipogon	38.68	5.00e-72	267.00
IUUC-Osa-086042	Oryza sativa	38.68	5.00e-73	270.00
IUUC-Ola-086950	Oryzias latipes	49.41	0.00e+00	784.00
IUUC-Oga-088547	Otolemur garnettii	87.65	0.00e+00	1442.00
IUUC-Oar-089796	Ovis aries	83.46	0.00e+00	2372.00
IUUC-Ptr-091248	Pan troglodytes	86.41	0.00e+00	3089.00
IUUC-Pan-091811	Papio anubis	86.69	0.00e+00	3123.00
IUUC-Psi-093656	Pelodiscus sinensis	76.37	1.00e-144	505.00
IUUC-Pfo-096830	Poecilia formosa	53.11	0.00e+00	1860.00
IUUC-Pab-098361	Pongo abelii	89.68	0.00e+00	1115.00
IUUC-Pop-100019	Populus trichocarpa	39.51	2.00e-70	262.00
IUUC-Pca-100269	Procavia capensis	84.72	2.00e-165	576.00
IUUC-Ppe-101526	Prunus persica	40.05	9.00e-71	263.00
IUUC-Pva-102214	Pteropus vampyrus	85.01	0.00e+00	1351.00
IUUC-Rno-105590	Rattus norvegicus	94.99	0.00e+00	3413.00
IUUC-Sha-106620	Sarcophilus harrisii	76.05	0.00e+00	1184.00
IUUC-Sit-109791	Setaria italica	38.35	2.00e-75	278.00
IUUC-Sly-111032	Solanum lycopersicum	39.66	3.00e-69	257.00
IUUC-Sbi-114810	Sorghum bicolor	36.94	7.00e-74	273.00
IUUC-Ssc-115972	Sus scrofa	71.29	0.00e+00	842.00
IUUC-Tgu-116944	Taeniopygia guttata	71.99	0.00e+00	1041.00
IUUC-Tru-118685	Takifugu rubripes	51.42	0.00e+00	819.00
IUUC-Tsy-119279	Tarsius syrichta	84.29	0.00e+00	1326.00
IUUC-Tni-120124	Tetraodon nigroviridis	55.14	0.00e+00	880.00
IUUC-Tca-121706	Theobroma cacao	40.45	1.00e-73	272.00
IUUC-Tae-125578	Triticum aestivum	38.87	2.00e-73	271.00
IUUC-Tur-126547	Triticum urartu	38.87	1.00e-73	272.00
IUUC-Tbe-128035	Tupaia belangeri	76.81	0.00e+00	693.00
IUUC-Ttr-128162	Tursiops truncatus	85.62	0.00e+00	1352.00
IUUC-Vvi-131247	Vitis vinifera	39.35	3.00e-70	261.00
IUUC-Xtr-132225	Xenopus tropicalis	60.22	0.00e+00	986.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence