iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RepTar	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-20	71.6	198	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtg 33
           gH d+++++a+ sdt  vsGs+Dgt+ +W+++++
   Q: 198  GHRDWIFAIAWmSDTVAVSGSRDGTVALWRVDSD 231
           8************9****************9875 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAPQQTGSRK RKASEVEQGA GTSSLPGRAA AAAGTGQADG PLLLAKRPRR PVARRSLVHY 60
LKGRALGADG HPGVAGFEGD LRSYGVLRLP ELLRERQLTL GPLNKVFASQ WLNARQVVCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCACACTGA CTTCACCACC TCCCAGACGG CAGCACTTCC CGCCCTCGGC CAAGTCCCAG 60
GCACTGCCAC CACACTCAAC GCAGTGCTTA CTGCTCCTTC CAAGCTCACA GTCCTTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mmu:245403

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001665	Ailuropoda melanoleuca	85.45	0.00e+00	683.00
IUUC-Cja-019567	Callithrix jacchus	79.32	0.00e+00	719.00
IUUC-Cfa-021077	Canis familiaris	85.99	0.00e+00	686.00
IUUC-Cpo-022378	Cavia porcellus	80.75	0.00e+00	658.00
IUUC-Csa-024224	Chlorocebus sabaeus	76.60	0.00e+00	690.00
IUUC-Dno-029097	Dasypus novemcinctus	77.83	0.00e+00	683.00
IUUC-Dor-030162	Dipodomys ordii	76.51	0.00e+00	637.00
IUUC-Fca-035737	Felis catus	87.10	0.00e+00	662.00
IUUC-Ggo-044768	Gorilla gorilla	82.09	0.00e+00	743.00
IUUC-Hsa-046326	Homo sapiens	81.66	0.00e+00	738.00
IUUC-Itr-049055	Ictidomys tridecemlineatus	82.52	0.00e+00	714.00
IUUC-Laf-054329	Loxodonta africana	80.61	0.00e+00	680.00
IUUC-Mcc-055186	Macaca mulatta	82.09	0.00e+00	742.00
IUUC-Mmr-060825	Microcebus murinus	79.10	0.00e+00	708.00
IUUC-Mpu-066373	Mustela putorius furo	86.02	0.00e+00	689.00
IUUC-Mlu-067830	Myotis lucifugus	78.33	0.00e+00	675.00
IUUC-Nle-070092	Nomascus leucogenys	73.56	0.00e+00	678.00
IUUC-Ocu-074938	Oryctolagus cuniculus	74.46	0.00e+00	669.00
IUUC-Oga-088793	Otolemur garnettii	82.09	0.00e+00	696.00
IUUC-Oar-089810	Ovis aries	79.10	0.00e+00	727.00
IUUC-Ptr-091017	Pan troglodytes	82.09	0.00e+00	743.00
IUUC-Pan-091736	Papio anubis	74.41	0.00e+00	694.00
IUUC-Pab-098366	Pongo abelii	73.56	0.00e+00	682.00
IUUC-Pca-100731	Procavia capensis	70.00	3.00e-178	617.00
IUUC-Pva-102699	Pteropus vampyrus	85.71	0.00e+00	750.00
IUUC-Rno-105773	Rattus norvegicus	97.45	0.00e+00	793.00
IUUC-Ssc-115607	Sus scrofa	82.09	0.00e+00	725.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence