iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121793

Ensembl Protein ID

EOX92912

UniProt Accession

A0A061DKF8; A0A061DKF8_THECC

Genbank Protein ID

EOX92912.1

Protein Name

Zinc finger WD40 repeat protein 1, putative

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001774

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001774	EOX92912	EOX92912

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-25	86.8	107	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+  v+++a+   s   l sGs Dgt++ W+ ++g++++
   Q: 107  GHKKAVHGIALpleS-EKLYSGSSDGTVRTWNCHSGKCVR 145
           899********9644.99*******************986 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGIRRAARRY DHDSVERLSV RRQGEAANIN DYRRNAKPYH SISEDLLAKS SSHHPKNSYV 60
STIKAREQEN KLCKYWMSGY CARGDKCWYL HSWYCGDGFT MLAKLEGHKK AVHGIALPLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATTGATA AAATCAATTA TCATCTAAAT CCATCCAATA TTTCAATCTC ATTCCGCTCA 60
GTAACAAATC CAAGCTCCGC CTTGTGCTTT CCTTCACCAG TTCCAGCAGT TGTTTTTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001971	Ailuropoda melanoleuca	26.74	3.00e-20	92.40
IUUC-Bta-013153	Bos taurus	26.74	4.00e-20	92.40
IUUC-Cfa-020036	Canis familiaris	26.74	4.00e-20	92.40
IUUC-Cpo-022194	Cavia porcellus	26.47	4.00e-19	89.00
IUUC-Csa-023363	Chlorocebus sabaeus	26.74	4.00e-20	92.40
IUUC-Dor-030750	Dipodomys ordii	26.74	5.00e-20	92.00
IUUC-Eca-033671	Equus caballus	27.21	8.00e-19	88.20
IUUC-Fca-035843	Felis catus	26.74	3.00e-20	92.80
IUUC-Ggo-045147	Gorilla gorilla	26.74	4.00e-20	92.40
IUUC-Hsa-046117	Homo sapiens	26.74	4.00e-20	92.40
IUUC-Itr-048899	Ictidomys tridecemlineatus	26.74	4.00e-20	92.40
IUUC-Lch-050593	Latimeria chalumnae	26.01	1.00e-19	90.50
IUUC-Mcc-055038	Macaca mulatta	26.74	4.00e-20	92.40
IUUC-Mdo-062312	Monodelphis domestica	26.01	5.00e-19	88.60
IUUC-Mmu-063844	Mus musculus	26.74	3.00e-20	92.40
IUUC-Mpu-066552	Mustela putorius furo	26.74	4.00e-20	92.40
IUUC-Mlu-067719	Myotis lucifugus	26.74	4.00e-20	92.40
IUUC-Nle-070045	Nomascus leucogenys	26.01	5.00e-19	88.60
IUUC-Opr-070927	Ochotona princeps	26.74	3.00e-20	92.40
IUUC-Oga-088380	Otolemur garnettii	26.74	3.00e-20	92.80
IUUC-Oar-089558	Ovis aries	32.67	6.00e-18	85.10
IUUC-Ptr-091606	Pan troglodytes	26.74	4.00e-20	92.40
IUUC-Pan-092227	Papio anubis	26.74	4.00e-20	92.40
IUUC-Pab-097589	Pongo abelii	26.74	4.00e-20	92.40
IUUC-Pva-102434	Pteropus vampyrus	26.74	3.00e-20	92.80
IUUC-Rno-105443	Rattus norvegicus	26.74	4.00e-20	92.40
IUUC-Sha-106517	Sarcophilus harrisii	26.01	5.00e-19	89.00
IUUC-Ssc-115990	Sus scrofa	26.01	2.00e-19	90.10
IUUC-Tgu-117222	Taeniopygia guttata	25.37	8.00e-18	84.70
IUUC-Tbe-128045	Tupaia belangeri	26.47	9.00e-19	87.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence