iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007178

UUCD1 version

UUC-ArT-01370

Ensembl Protein ID

AT2G19540.1

UniProt Accession

Q9ZUN8; Q9ZUN8_ARATH

Genbank Protein ID

AAD10153.1; AAK43883.1; AAM91214.1; AEC06893.1

Protein Name

Putative WD-40 repeat protein; Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

AC005917; AF370506; AY128814; CP002685

Gene Name

heat stress tolerant DWD 1; HTD1; At2g19540; At2g19540/F3P11.14; F3P11.14; F3P11_14

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G19540	AT2G19540.1	AT2G19540.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-22	78.0	267	303

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gHt+sv +l++   + + ++s+s Dg++ vWD+r g+
   Q: 267  GHTASVEDLQWspAEeNVFASCSVDGSVAVWDIRLGK 303
           8***********844699**************88665 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGRNVKTKAK RKNKKKAEAS SSEIPSIPTR VWQPGVDTLE DGEELQCDPS AYNSLHGFHV 60
GWPCLSFDIL GDKLGLNRTE FPHTLYMVAG TQAEKAAHNS IGLFKITNVS GKRRDVVPKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACTGAAGAA TCCTAAATTG ATCATCGTCG TCCTTTGAGT AATTTAGAAA ATCAAAATGG 60
GTCGCAACGT CAAAACCAAG GCAAAGAGGA AGAACAAGGT TTGAACTTTT TGAATCCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus

KEGG

ath:AT2G19540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	60.64	4.00e-147	513.00
IUUC-Aml-002309	Ailuropoda melanoleuca	43.58	2.00e-88	318.00
IUUC-Atr-002461	Amborella trichopoda	63.70	9.00e-156	542.00
IUUC-Aca-004760	Anolis carolinensis	43.60	1.00e-84	306.00
IUUC-Aly-005405	Arabidopsis lyrata	96.17	0.00e+00	827.00
IUUC-Ago-007735	Ashbya gossypii	36.73	4.00e-70	258.00
IUUC-Acl-008294	Aspergillus clavatus	37.11	1.00e-70	259.00
IUUC-Afl-008486	Aspergillus flavus	38.34	1.00e-70	260.00
IUUC-Afu-009019	Aspergillus fumigatus	37.53	6.00e-71	261.00
IUUC-Ani-009465	Aspergillus nidulans	38.72	2.00e-70	259.00
IUUC-Ang-009641	Aspergillus niger	37.33	2.00e-69	255.00
IUUC-Ate-010426	Aspergillus terreus	36.44	6.00e-71	261.00
IUUC-Ame-010856	Astyanax mexicanus	43.38	4.00e-91	327.00
IUUC-Bgr-012258	Blumeria graminis	36.71	5.00e-60	224.00
IUUC-Bta-012437	Bos taurus	42.43	3.00e-86	311.00
IUUC-Bci-013647	Botrytis cinerea	37.53	3.00e-72	265.00
IUUC-Bdi-014728	Brachypodium distachyon	64.32	2.00e-165	574.00
IUUC-Bol-015126	Brassica oleracea	87.95	0.00e+00	759.00
IUUC-Bra-017677	Brassica rapa	87.13	4.00e-92	330.00
IUUC-Cel-018454	Caenorhabditis elegans	41.23	4.00e-84	304.00
IUUC-Cja-018859	Callithrix jacchus	42.24	1.00e-86	313.00
IUUC-Cfa-020912	Canis familiaris	42.79	1.00e-87	316.00
IUUC-Cpo-021368	Cavia porcellus	42.27	6.00e-88	317.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	48.18	5.00e-52	198.00
IUUC-Csa-023599	Chlorocebus sabaeus	42.05	7.00e-88	317.00
IUUC-Cin-025718	Ciona intestinalis	43.05	4.00e-94	337.00
IUUC-Csv-025806	Ciona savignyi	46.77	6.00e-75	273.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	35.51	3.00e-60	225.00
IUUC-Cne-026781	Cryptococcus neoformans	38.94	2.00e-75	276.00
IUUC-Cme-027129	Cyanidioschyzon merolae	36.78	1.00e-47	183.00
IUUC-Dre-028225	Danio rerio	40.73	5.00e-88	317.00
IUUC-Dno-029792	Dasypus novemcinctus	42.44	8.00e-84	303.00
IUUC-Dor-030773	Dipodomys ordii	42.60	9.00e-42	163.00
IUUC-Dse-031289	Dothistroma septosporum	37.98	1.00e-70	259.00
IUUC-Dme-031676	Drosophila melanogaster	42.73	4.00e-91	327.00
IUUC-Eca-033618	Equus caballus	42.89	5.00e-86	310.00
IUUC-Fca-036102	Felis catus	42.95	8.00e-87	313.00
IUUC-Fox-037899	Fusarium oxysporum	37.41	8.00e-72	263.00
IUUC-Fso-038130	Fusarium solani	38.32	5.00e-72	264.00
IUUC-Gmo-038741	Gadus morhua	41.24	3.00e-87	314.00
IUUC-Ggr-040086	Gaeumannomyces graminis	37.64	1.00e-70	259.00
IUUC-Gac-042243	Gasterosteus aculeatus	41.23	1.00e-88	319.00
IUUC-Gma-044177	Glycine max	74.27	0.00e+00	642.00
IUUC-Ggo-044564	Gorilla gorilla	42.50	1.00e-88	319.00
IUUC-Hsa-046021	Homo sapiens	42.50	2.00e-88	318.00
IUUC-Hvu-047721	Hordeum vulgare	62.56	3.00e-156	544.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	40.91	4.00e-85	307.00
IUUC-Kpa-049271	Komagataella pastoris	38.33	2.00e-68	252.00
IUUC-Lch-049974	Latimeria chalumnae	40.09	5.00e-84	304.00
IUUC-Lpe-051388	Leersia perrieri	60.88	3.00e-141	494.00
IUUC-Lma-053010	Leptosphaeria maculans	36.38	1.00e-66	246.00
IUUC-Laf-054058	Loxodonta africana	43.15	2.00e-88	318.00
IUUC-Mcc-055246	Macaca mulatta	41.99	2.00e-88	318.00
IUUC-Meu-056795	Macropus eugenii	40.36	9.00e-84	303.00
IUUC-Mor-057175	Magnaporthe oryzae	38.12	1.00e-71	263.00
IUUC-Mpo-057388	Magnaporthe poae	35.40	2.00e-56	212.00
IUUC-Mtr-057752	Medicago truncatula	70.65	0.00e+00	630.00
IUUC-Mla-058904	Melampsora laricipopulina	39.45	3.00e-70	258.00
IUUC-Mvi-060525	Microbotryum violaceum	40.13	1.00e-72	266.00
IUUC-Mmr-060905	Microcebus murinus	42.18	6.00e-87	313.00
IUUC-Mmu-063428	Mus musculus	42.05	6.00e-87	313.00
IUUC-Mac-065276	Musa acuminata	69.59	2.00e-168	584.00
IUUC-Mpu-066062	Mustela putorius furo	42.63	2.00e-88	319.00
IUUC-Mlu-068115	Myotis lucifugus	49.34	1.00e-53	202.00
IUUC-Nfi-068512	Neosartorya fischeri	37.56	6.00e-70	257.00
IUUC-Ncr-068629	Neurospora crassa	39.14	2.00e-69	255.00
IUUC-Nle-070016	Nomascus leucogenys	41.69	3.00e-85	308.00
IUUC-Ont-072230	Oreochromis niloticus	41.78	2.00e-89	322.00
IUUC-Oan-072759	Ornithorhynchus anatinus	29.98	3.00e-53	201.00
IUUC-Ocu-074511	Oryctolagus cuniculus	43.25	5.00e-88	317.00
IUUC-Oba-075093	Oryza barthii	61.77	1.00e-150	525.00
IUUC-Obr-076130	Oryza brachyantha	64.55	8.00e-163	565.00
IUUC-Ogl-077397	Oryza glaberrima	65.01	1.00e-163	568.00
IUUC-Ogu-078111	Oryza glumaepatula	62.59	3.00e-142	499.00
IUUC-Oin-079162	Oryza indica	62.63	5.00e-155	540.00
IUUC-Olo-080909	Oryza longistaminata	52.88	7.00e-139	486.00
IUUC-Ome-081768	Oryza meridionalis	62.47	6.00e-143	500.00
IUUC-Oni-082453	Oryza nivara	63.19	4.00e-153	535.00
IUUC-Opu-084133	Oryza punctata	61.11	3.00e-134	471.00
IUUC-Oru-085056	Oryza rufipogon	60.10	5.00e-126	443.00
IUUC-Osa-085735	Oryza sativa	64.58	8.00e-163	566.00
IUUC-Ola-087066	Oryzias latipes	42.27	3.00e-87	315.00
IUUC-Olu-087594	Ostreococcus lucimarinus	46.67	3.00e-106	377.00
IUUC-Oga-087974	Otolemur garnettii	42.43	2.00e-87	315.00
IUUC-Oar-089902	Ovis aries	42.01	9.00e-86	310.00
IUUC-Ptr-090469	Pan troglodytes	40.09	2.00e-82	299.00
IUUC-Pan-092858	Papio anubis	42.05	6.00e-88	317.00
IUUC-Psi-094092	Pelodiscus sinensis	35.58	6.00e-43	167.00
IUUC-Pno-094919	Phaeosphaeria nodorum	36.41	4.00e-64	238.00
IUUC-Ppa-095849	Physcomitrella patens	57.61	5.00e-144	503.00
IUUC-Pfo-096535	Poecilia formosa	42.07	2.00e-89	321.00
IUUC-Pab-098478	Pongo abelii	41.82	2.00e-87	315.00
IUUC-Pop-098902	Populus trichocarpa	73.48	0.00e+00	631.00
IUUC-Pca-100403	Procavia capensis	45.83	1.00e-66	245.00
IUUC-Ppe-101997	Prunus persica	75.73	0.00e+00	655.00
IUUC-Pva-102423	Pteropus vampyrus	42.47	7.00e-89	320.00
IUUC-Pgr-103339	Puccinia graminis	38.24	3.00e-76	278.00
IUUC-Ptt-103937	Puccinia triticina	38.63	6.00e-77	281.00
IUUC-Pte-104051	Pyrenophora teres	36.38	2.00e-67	249.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	36.83	5.00e-68	251.00
IUUC-Rno-106118	Rattus norvegicus	42.72	1.00e-84	306.00
IUUC-Sce-106330	Saccharomyces cerevisiae	36.88	1.00e-63	236.00
IUUC-Sha-106564	Sarcophilus harrisii	39.90	1.00e-69	256.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	39.73	5.00e-79	287.00
IUUC-Spo-108351	Schizosaccharomyces pombe	39.23	2.00e-82	298.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	37.75	1.00e-72	266.00
IUUC-Smo-109619	Selaginella moellendorffii	55.28	7.00e-129	452.00
IUUC-Sit-109857	Setaria italica	64.17	1.00e-161	562.00
IUUC-Sly-111245	Solanum lycopersicum	63.54	4.00e-160	556.00
IUUC-Stu-112645	Solanum tuberosum	68.37	2.00e-176	610.00
IUUC-Sar-113342	Sorex araneus	42.40	5.00e-81	293.00
IUUC-Sbi-114359	Sorghum bicolor	63.72	2.00e-160	557.00
IUUC-Sre-115098	Sporisorium reilianum	39.91	3.00e-77	281.00
IUUC-Ssc-115496	Sus scrofa	42.89	2.00e-88	318.00
IUUC-Tru-117662	Takifugu rubripes	41.71	7.00e-89	320.00
IUUC-Tni-120564	Tetraodon nigroviridis	41.96	1.00e-74	272.00
IUUC-Tca-121710	Theobroma cacao	74.49	0.00e+00	658.00
IUUC-Tre-122239	Trichoderma reesei	38.01	2.00e-73	269.00
IUUC-Tvi-122589	Trichoderma virens	38.01	1.00e-73	269.00
IUUC-Tae-122903	Triticum aestivum	65.59	1.00e-165	575.00
IUUC-Tur-126135	Triticum urartu	59.15	2.00e-120	426.00
IUUC-Tme-127073	Tuber melanosporum	37.50	3.00e-66	245.00
IUUC-Ttr-128383	Tursiops truncatus	41.78	3.00e-85	308.00
IUUC-Uma-129345	Ustilago maydis	38.91	5.00e-78	284.00
IUUC-Vda-129893	Verticillium dahliae	38.32	2.00e-72	266.00
IUUC-Vvi-131067	Vitis vinifera	76.02	0.00e+00	668.00
IUUC-Xtr-132603	Xenopus tropicalis	42.11	1.00e-92	332.00
IUUC-Xma-133149	Xiphophorus maculatus	41.59	2.00e-88	319.00
IUUC-Yli-134459	Yarrowia lipolytica	37.98	2.00e-67	249.00
IUUC-Zma-135548	Zea mays	64.85	1.00e-160	558.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence