iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	34.23	1.00e-13	73.20	IUUC-Ath-006835

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEGMDVDLDP ELMQKFSCLG TTDKDVLISE FQRLLGFQLN PAGCAFFLDM TNWNLQAAIG 60
AYYDFESPNV SVPSMSFVED VTIGEGESIP PDTQFIKTWR IQNSGAEAWP PGVCLKYVGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGCCCGGG CGCGGCGGCC GCCCGTGGAG AAGCAGGGTC GGGGCGGTGG AAGCTGTGCC 60
TCCGGGCCCC CGCCATGGAG GGCATGGACG TGGACCTAGA CCCCGAGCTC ATGCAGAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR032350--N_BRCA1_central
IPR009060--UBA-like

Pfam

PF16158--N_BRCA1_IG

Gene Ontology

GO:0005776--C:autophagosome
GO:0000407--C:pre-autophagosomal structure
GO:0043130--F:ubiquitin binding
GO:0016236--P:macroautophagy

KEGG

rno:294154

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001137	Aegilops tauschii	35.96	2.00e-08	55.10
IUUC-Aml-002034	Ailuropoda melanoleuca	95.37	3.00e-120	424.00
IUUC-Aca-004390	Anolis carolinensis	95.61	1.00e-116	412.00
IUUC-Aly-006000	Arabidopsis lyrata	32.99	4.00e-11	63.50
IUUC-Ath-006835	Arabidopsis thaliana	34.23	4.00e-14	73.20
IUUC-Ang-009700	Aspergillus niger	30.70	3.00e-12	67.00
IUUC-Ame-011130	Astyanax mexicanus	81.31	2.00e-103	368.00
IUUC-Bta-012882	Bos taurus	97.17	7.00e-121	425.00
IUUC-Bci-013961	Botrytis cinerea	28.23	6.00e-11	63.20
IUUC-Bdi-014744	Brachypodium distachyon	37.04	3.00e-15	77.40
IUUC-Bol-016421	Brassica oleracea	32.71	3.00e-14	73.90
IUUC-Cel-018277	Caenorhabditis elegans	28.65	2.00e-19	88.60
IUUC-Cja-019251	Callithrix jacchus	98.54	5.00e-121	427.00
IUUC-Cfa-020453	Canis familiaris	99.51	2.00e-121	428.00
IUUC-Cpo-022257	Cavia porcellus	98.03	1.00e-87	315.00
IUUC-Csa-024055	Chlorocebus sabaeus	99.02	2.00e-121	428.00
IUUC-Cin-025291	Ciona intestinalis	64.92	5.00e-71	260.00
IUUC-Csv-026267	Ciona savignyi	58.10	3.00e-69	255.00
IUUC-Cgl-026677	Colletotrichum gloeosporioides	33.33	3.00e-14	74.30
IUUC-Dre-028775	Danio rerio	87.44	2.00e-110	392.00
IUUC-Dno-029146	Dasypus novemcinctus	99.51	7.00e-121	426.00
IUUC-Dor-030521	Dipodomys ordii	99.15	2.00e-66	244.00
IUUC-Ete-032729	Echinops telfairi	84.06	7.00e-56	209.00
IUUC-Eca-033862	Equus caballus	98.54	1.00e-120	425.00
IUUC-Fca-035369	Felis catus	96.27	3.00e-90	324.00
IUUC-Fox-037767	Fusarium oxysporum	29.31	3.00e-11	63.90
IUUC-Fso-038322	Fusarium solani	29.75	6.00e-12	66.60
IUUC-Gmo-039072	Gadus morhua	87.32	4.00e-108	383.00
IUUC-Ggr-039790	Gaeumannomyces graminis	33.04	1.00e-14	75.50
IUUC-Gga-040557	Gallus gallus	95.12	7.00e-116	409.00
IUUC-Gac-041423	Gasterosteus aculeatus	85.58	1.00e-109	389.00
IUUC-Ggo-044838	Gorilla gorilla	99.02	2.00e-121	428.00
IUUC-Hsa-046338	Homo sapiens	99.02	2.00e-121	428.00
IUUC-Hvu-047467	Hordeum vulgare	35.09	9.00e-15	75.90
IUUC-Lch-050368	Latimeria chalumnae	90.73	4.00e-112	397.00
IUUC-Lpe-051565	Leersia perrieri	37.04	3.00e-15	77.40
IUUC-Loc-052938	Lepisosteus oculatus	90.24	1.00e-111	395.00
IUUC-Laf-053897	Loxodonta africana	99.49	2.00e-115	408.00
IUUC-Mpo-057563	Magnaporthe poae	33.05	2.00e-14	74.70
IUUC-Mla-059018	Melampsora laricipopulina	35.78	4.00e-18	82.80
IUUC-Mga-059604	Meleagris gallopavo	95.39	1.00e-84	305.00
IUUC-Mmr-061682	Microcebus murinus	99.51	3.00e-121	427.00
IUUC-Mdo-061908	Monodelphis domestica	98.03	3.00e-86	310.00
IUUC-Mmu-063205	Mus musculus	99.51	8.00e-121	426.00
IUUC-Mac-064456	Musa acuminata	35.45	3.00e-19	90.50
IUUC-Mpu-065953	Mustela putorius furo	99.34	1.00e-88	318.00
IUUC-Ncr-068640	Neurospora crassa	29.75	7.00e-11	62.80
IUUC-Nle-068992	Nomascus leucogenys	98.68	2.00e-88	318.00
IUUC-Opr-070967	Ochotona princeps	99.02	2.00e-121	427.00
IUUC-Ont-071773	Oreochromis niloticus	85.12	5.00e-106	377.00
IUUC-Oan-072758	Ornithorhynchus anatinus	96.05	2.00e-85	308.00
IUUC-Ocu-073962	Oryctolagus cuniculus	95.79	1.00e-119	422.00
IUUC-Oba-075551	Oryza barthii	35.96	3.00e-15	77.40
IUUC-Obr-076023	Oryza brachyantha	37.04	3.00e-15	77.40
IUUC-Ogl-076946	Oryza glaberrima	35.96	3.00e-15	77.40
IUUC-Ogu-078367	Oryza glumaepatula	35.96	3.00e-15	77.40
IUUC-Oin-079583	Oryza indica	35.96	3.00e-15	77.40
IUUC-Olo-080804	Oryza longistaminata	39.45	3.00e-17	84.30
IUUC-Ome-081656	Oryza meridionalis	35.96	3.00e-15	77.40
IUUC-Oni-082599	Oryza nivara	35.96	3.00e-15	77.40
IUUC-Opu-083123	Oryza punctata	37.96	2.00e-15	77.80
IUUC-Oru-084697	Oryza rufipogon	37.04	7.00e-17	82.80
IUUC-Osa-085636	Oryza sativa	37.04	7.00e-17	82.80
IUUC-Ola-087050	Oryzias latipes	84.88	3.00e-105	374.00
IUUC-Oga-088976	Otolemur garnettii	96.26	6.00e-122	429.00
IUUC-Oar-090044	Ovis aries	99.34	9.00e-89	319.00
IUUC-Ptr-091534	Pan troglodytes	98.68	2.00e-88	318.00
IUUC-Pan-091725	Papio anubis	99.02	1.00e-121	429.00
IUUC-Pma-094658	Petromyzon marinus	70.20	1.00e-58	219.00
IUUC-Ppa-095723	Physcomitrella patens	41.12	5.00e-19	89.70
IUUC-Pfo-096761	Poecilia formosa	86.05	2.00e-107	382.00
IUUC-Pab-098767	Pongo abelii	99.02	1.00e-121	429.00
IUUC-Pop-099441	Populus trichocarpa	34.86	3.00e-15	77.40
IUUC-Pca-100636	Procavia capensis	99.34	7.00e-88	316.00
IUUC-Pva-102727	Pteropus vampyrus	99.51	2.00e-121	428.00
IUUC-Smo-109175	Selaginella moellendorffii	38.74	1.00e-15	76.60
IUUC-Sit-110140	Setaria italica	37.04	3.00e-15	77.80
IUUC-Sbi-114660	Sorghum bicolor	37.17	5.00e-18	86.30
IUUC-Tgu-117107	Taeniopygia guttata	91.48	2.00e-95	342.00
IUUC-Tru-118418	Takifugu rubripes	86.51	8.00e-110	389.00
IUUC-Tni-120405	Tetraodon nigroviridis	86.51	6.00e-110	390.00
IUUC-Tvi-122435	Trichoderma virens	30.58	9.00e-13	69.30
IUUC-Tae-123486	Triticum aestivum	35.09	1.00e-14	75.50
IUUC-Tur-126775	Triticum urartu	35.09	1.00e-14	75.50
IUUC-Ttr-128373	Tursiops truncatus	99.42	2.00e-100	358.00
IUUC-Vpa-130341	Vicugna pacos	96.24	1.00e-71	262.00
IUUC-Xma-133093	Xiphophorus maculatus	86.05	2.00e-107	382.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence