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Tag Content
iUUCD ID IUUC-Bra-017323
Ensembl Protein ID Bra011139.1-P
UniProt Accession M4D3T5; M4D3T5_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra011139 Bra011139.1 Bra011139.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.60e-38 129.3 241 272
UBD/Beta-Prp 6.80e-57 193.9 23 320
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    gHt++v +++ +d + +++Gs D t+++WDl
   Q: 241 GHTSWVLSVDAsPDgGAIATGSSDRTVRLWDL 272
    8*********99999****************8 PP
   


   UBD/Beta-Prp

   S: 18   f...spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dkl 109
    + + ll+tgs d+t+k+w++++ +l+r+ gh+ +v+av +p+g i +++s D +++v+d++t+ ++ +l++ ++v+ ++f p+g
   Q: 23 VpatEERPALLLTGSLDETVKLWRADELDLVRTNTGHSLGVAAVAAHPSGIIAASSSLDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGtILA 118
    34434445699***************************************9***************************************885677 PP
   S: 110 vsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng. 192
    v+G++ +++wd+ + +++ ++ +++v +v+++p+g+ l+ Gs D+t+ ++d+ + kll++l+g h+ +v+sl f++
   Q: 119 VAGGSSASVKLWDTASWRLISTlsiprpeapkpsDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEG-HNMPVRSLVFSPVDp 213
    89999*********99999999**********98888999***************************************9.***********9775 PP
   S: 193 kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav.....lsfgdnvlvlg 283
    + l sgs+dg v++ d + ++ v ++ ght++v+sv++sp++ +++gssD+++r+Wdl+ + ++t+++hn++v+sva+ ++ l+++
   Q: 214 RVLFSGSDDGHVNVHDAEGKTLVGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFrppggTGVRAGRLASV 309
    7788****************************************************************************7776666668889*** PP
   S: 284 sedskvniwkl 294
    s+d++v ++++
   Q: 310 SDDKSVSLYDY 320
    *********98 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MKLAGLKSIE NAHEDSVWAA TWVPATEERP ALLLTGSLDE TVKLWRADEL DLVRTNTGHS 60
LGVAAVAAHP SGIIAASSSL DSFVRVFDVD TNATIAVLEA PPSEVWGMQF EPKGTILAVA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017323|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAAACTCG CAGGTCTGAA ATCGATCGAG AACGCCCACG AAGATTCCGT TTGGGCGGCG 60
ACTTGGGTTC CGGCGACGGA AGAACGACCG GCGTTGCTTC TTACCGGATC TCTAGACGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017323|E3,WD_repeat;UBD,Beta-Prp|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000774 Aegilops tauschii 62.54 2.00e-115 408.00
IUUC-Aml-002245 Ailuropoda melanoleuca 38.78 4.00e-54 204.00
IUUC-Atr-003142 Amborella trichopoda 73.46 1.00e-91 328.00
IUUC-Apl-003179 Anas platyrhynchos 38.02 3.00e-58 218.00
IUUC-Aca-004880 Anolis carolinensis 39.30 9.00e-62 229.00
IUUC-Aly-005956 Arabidopsis lyrata 97.20 0.00e+00 632.00
IUUC-Ath-007230 Arabidopsis thaliana 97.82 3.00e-173 600.00
IUUC-Ame-011511 Astyanax mexicanus 39.17 1.00e-57 216.00
IUUC-Bta-012936 Bos taurus 38.46 1.00e-54 206.00
IUUC-Bdi-015020 Brachypodium distachyon 69.66 1.00e-113 402.00
IUUC-Bol-016345 Brassica oleracea 99.69 0.00e+00 643.00
IUUC-Cja-019961 Callithrix jacchus 38.46 2.00e-54 205.00
IUUC-Cfa-020862 Canis familiaris 39.10 1.00e-54 206.00
IUUC-Cpo-021356 Cavia porcellus 38.78 2.00e-54 205.00
IUUC-Cre-022602 Chlamydomonas reinhardtii 41.85 7.00e-53 200.00
IUUC-Csa-024067 Chlorocebus sabaeus 38.46 2.00e-54 205.00
IUUC-Cin-025261 Ciona intestinalis 38.46 2.00e-60 225.00
IUUC-Cne-026846 Cryptococcus neoformans 28.79 3.00e-25 108.00
IUUC-Dre-027706 Danio rerio 32.69 2.00e-38 152.00
IUUC-Dno-029084 Dasypus novemcinctus 38.54 3.00e-53 201.00
IUUC-Dor-030353 Dipodomys ordii 34.30 5.00e-42 164.00
IUUC-Dme-031836 Drosophila melanogaster 35.99 1.00e-53 203.00
IUUC-Ete-032261 Echinops telfairi 38.39 2.00e-53 202.00
IUUC-Eca-034231 Equus caballus 34.91 4.00e-45 174.00
IUUC-Eeu-034828 Erinaceus europaeus 37.86 4.00e-51 194.00
IUUC-Fca-036569 Felis catus 38.78 2.00e-54 205.00
IUUC-Fal-037469 Ficedula albicollis 38.98 4.00e-58 218.00
IUUC-Fox-038047 Fusarium oxysporum 28.36 7.00e-25 107.00
IUUC-Gmo-039579 Gadus morhua 39.74 3.00e-58 218.00
IUUC-Gga-040808 Gallus gallus 37.82 1.00e-56 213.00
IUUC-Gac-042100 Gasterosteus aculeatus 40.06 1.00e-58 219.00
IUUC-Gma-044408 Glycine max 79.44 1.00e-151 528.00
IUUC-Ggo-045227 Gorilla gorilla 38.46 2.00e-54 205.00
IUUC-Hsa-045839 Homo sapiens 38.46 2.00e-54 205.00
IUUC-Hvu-047591 Hordeum vulgare 66.87 1.00e-117 415.00
IUUC-Itr-048741 Ictidomys tridecemlineatus 38.46 1.00e-54 206.00
IUUC-Lch-049549 Latimeria chalumnae 37.50 4.00e-54 204.00
IUUC-Lpe-050746 Leersia perrieri 69.54 2.00e-119 421.00
IUUC-Loc-052540 Lepisosteus oculatus 39.10 2.00e-54 205.00
IUUC-Laf-053907 Loxodonta africana 38.46 1.00e-54 206.00
IUUC-Mcc-055828 Macaca mulatta 36.14 4.00e-51 194.00
IUUC-Meu-056075 Macropus eugenii 37.23 5.00e-48 184.00
IUUC-Mtr-057728 Medicago truncatula 79.75 4.00e-138 483.00
IUUC-Mga-059872 Meleagris gallopavo 38.66 1.00e-57 216.00
IUUC-Mmr-060985 Microcebus murinus 38.06 2.00e-53 201.00
IUUC-Mdo-062758 Monodelphis domestica 38.98 6.00e-58 217.00
IUUC-Mmu-063580 Mus musculus 38.14 7.00e-54 203.00
IUUC-Mac-064880 Musa acuminata 78.26 1.00e-148 518.00
IUUC-Mpu-066577 Mustela putorius furo 38.78 7.00e-54 203.00
IUUC-Nle-069573 Nomascus leucogenys 38.46 2.00e-54 205.00
IUUC-Opr-070216 Ochotona princeps 38.14 6.00e-54 203.00
IUUC-Ont-071981 Oreochromis niloticus 40.38 1.00e-58 219.00
IUUC-Oan-073223 Ornithorhynchus anatinus 39.61 4.00e-39 154.00
IUUC-Ocu-074199 Oryctolagus cuniculus 36.12 4.00e-45 174.00
IUUC-Oba-075255 Oryza barthii 62.62 1.00e-102 365.00
IUUC-Obr-076168 Oryza brachyantha 64.54 3.00e-86 311.00
IUUC-Ogl-077777 Oryza glaberrima 69.75 3.00e-119 421.00
IUUC-Ogu-078780 Oryza glumaepatula 69.75 3.00e-119 421.00
IUUC-Oin-079228 Oryza indica 69.75 7.00e-122 429.00
IUUC-Olo-080617 Oryza longistaminata 75.69 2.00e-65 240.00
IUUC-Ome-081421 Oryza meridionalis 68.52 2.00e-118 418.00
IUUC-Oni-082997 Oryza nivara 69.75 7.00e-122 429.00
IUUC-Opu-083931 Oryza punctata 69.97 6.00e-121 426.00
IUUC-Oru-084645 Oryza rufipogon 69.75 3.00e-119 421.00
IUUC-Osa-085842 Oryza sativa 69.75 7.00e-122 429.00
IUUC-Ola-086696 Oryzias latipes 39.74 5.00e-56 210.00
IUUC-Olu-087643 Ostreococcus lucimarinus 48.23 7.00e-56 209.00
IUUC-Oga-088272 Otolemur garnettii 38.78 7.00e-55 207.00
IUUC-Oar-089416 Ovis aries 38.46 1.00e-54 206.00
IUUC-Ptr-090944 Pan troglodytes 38.46 2.00e-54 205.00
IUUC-Pan-091861 Papio anubis 38.46 2.00e-54 205.00
IUUC-Psi-093750 Pelodiscus sinensis 38.46 8.00e-58 216.00
IUUC-Pma-094608 Petromyzon marinus 38.49 5.00e-51 194.00
IUUC-Ppa-095737 Physcomitrella patens 66.05 4.00e-127 447.00
IUUC-Pfo-096479 Poecilia formosa 40.06 2.00e-54 205.00
IUUC-Pab-098179 Pongo abelii 38.46 2.00e-54 205.00
IUUC-Pop-099532 Populus trichocarpa 79.52 1.00e-138 485.00
IUUC-Ppe-102056 Prunus persica 76.64 2.00e-143 501.00
IUUC-Pva-102859 Pteropus vampyrus 38.14 2.00e-53 202.00
IUUC-Rno-105826 Rattus norvegicus 38.14 2.00e-53 202.00
IUUC-Sha-106660 Sarcophilus harrisii 37.18 6.00e-53 200.00
IUUC-Smo-109234 Selaginella moellendorffii 60.12 2.00e-107 381.00
IUUC-Sit-110048 Setaria italica 69.35 2.00e-106 378.00
IUUC-Sly-111618 Solanum lycopersicum 69.04 3.00e-123 434.00
IUUC-Stu-112543 Solanum tuberosum 69.35 5.00e-127 446.00
IUUC-Sar-113743 Sorex araneus 38.74 1.00e-38 152.00
IUUC-Sbi-114309 Sorghum bicolor 67.80 1.00e-104 372.00
IUUC-Ssc-115560 Sus scrofa 35.90 9.00e-49 186.00
IUUC-Tgu-117300 Taeniopygia guttata 38.66 1.00e-57 216.00
IUUC-Tru-117933 Takifugu rubripes 40.06 1.00e-58 219.00
IUUC-Tsy-119574 Tarsius syrichta 32.69 9.00e-37 146.00
IUUC-Tni-120191 Tetraodon nigroviridis 39.36 2.00e-42 164.00
IUUC-Tca-120983 Theobroma cacao 81.99 2.00e-145 508.00
IUUC-Tae-124056 Triticum aestivum 69.04 2.00e-116 411.00
IUUC-Tur-126711 Triticum urartu 67.59 1.00e-112 398.00
IUUC-Tbe-127802 Tupaia belangeri 38.78 2.00e-54 205.00
IUUC-Vpa-130618 Vicugna pacos 39.75 1.00e-46 179.00
IUUC-Vvi-130981 Vitis vinifera 82.55 4.00e-147 513.00
IUUC-Xtr-132460 Xenopus tropicalis 38.78 1.00e-55 209.00
IUUC-Xma-134154 Xiphophorus maculatus 40.06 1.00e-54 206.00
Created Date 25-Jun-2017

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