iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mga-059719

UUCD1 version

UUC-MeG-00032

Ensembl Protein ID

ENSMGAP00000000151.2

UniProt Accession

G1MQ22; G1MQ22_MELGA

Protein Name

Uncharacterized protein

Gene Name

SNRNP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMGAG00000000765.2	ENSMGAT00000000783.2	ENSMGAP00000000151.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-47	154.8	131	165
UBD/Beta-Prp	1.10e-79	267.4	44	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 131  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 165
           8*******9659955588999***********886 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 44   LSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 131
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 132  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 218
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++riWd+r
   Q: 219  SVTGLSLSSEGSYLLSNAMDNTVRIWDVR 247
           ***************************98 PP

Organism

Meleagris gallopavo

Protein Sequence
(Fasta)

ATEGRLEKGL FLVSSAPAVP HFSPRILPQG PPRCSSLQAP IMLLSGHEGE VYCCKFHPNG 60
NTLASAGFDR LILLWNVYGD CDNYATLKGH SGAVMELHYN TDGSMLFSAS TDKTVAVWDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGACGGAAG GAAGGCTGGA GAAGGGCGGN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	58.84	2.00e-119	422.00
IUUC-Aml-001428	Ailuropoda melanoleuca	97.61	1.00e-167	581.00
IUUC-Atr-003164	Amborella trichopoda	57.14	5.00e-122	430.00
IUUC-Apl-003447	Anas platyrhynchos	99.65	1.00e-164	571.00
IUUC-Aca-004270	Anolis carolinensis	91.59	1.00e-168	584.00
IUUC-Aly-005659	Arabidopsis lyrata	61.06	6.00e-125	439.00
IUUC-Ath-006764	Arabidopsis thaliana	61.09	9.00e-124	436.00
IUUC-Acl-008324	Aspergillus clavatus	48.56	5.00e-93	333.00
IUUC-Afl-008607	Aspergillus flavus	48.99	1.00e-88	318.00
IUUC-Afu-008998	Aspergillus fumigatus	48.24	7.00e-93	333.00
IUUC-Ani-009363	Aspergillus nidulans	48.24	3.00e-94	337.00
IUUC-Ang-009513	Aspergillus niger	47.85	6.00e-84	303.00
IUUC-Aor-010237	Aspergillus oryzae	49.52	3.00e-94	337.00
IUUC-Ate-010374	Aspergillus terreus	45.05	2.00e-81	295.00
IUUC-Ame-010728	Astyanax mexicanus	89.84	2.00e-167	580.00
IUUC-Bgr-012297	Blumeria graminis	46.52	5.00e-70	256.00
IUUC-Bta-012433	Bos taurus	97.72	2.00e-175	607.00
IUUC-Bci-013763	Botrytis cinerea	50.96	3.00e-95	341.00
IUUC-Bdi-014490	Brachypodium distachyon	58.18	4.00e-119	420.00
IUUC-Bol-016479	Brassica oleracea	61.22	2.00e-123	434.00
IUUC-Bra-017219	Brassica rapa	60.19	3.00e-124	437.00
IUUC-Cel-018512	Caenorhabditis elegans	57.74	1.00e-112	399.00
IUUC-Cja-019308	Callithrix jacchus	97.41	6.00e-177	612.00
IUUC-Cfa-020998	Canis familiaris	97.73	5.00e-177	613.00
IUUC-Cpo-021580	Cavia porcellus	97.72	6.00e-176	609.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	55.06	2.00e-108	384.00
IUUC-Csa-023456	Chlorocebus sabaeus	97.41	8.00e-177	612.00
IUUC-Cho-024644	Choloepus hoffmanni	97.42	4.00e-177	612.00
IUUC-Cin-025463	Ciona intestinalis	59.76	1.00e-126	445.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	48.73	9.00e-95	339.00
IUUC-Cne-026780	Cryptococcus neoformans	42.27	4.00e-67	247.00
IUUC-Dre-027671	Danio rerio	89.68	1.00e-174	604.00
IUUC-Dno-029769	Dasypus novemcinctus	97.12	4.00e-178	616.00
IUUC-Dor-030776	Dipodomys ordii	99.22	7.00e-75	273.00
IUUC-Dse-031316	Dothistroma septosporum	43.45	2.00e-84	305.00
IUUC-Dme-031756	Drosophila melanogaster	61.02	3.00e-123	434.00
IUUC-Ete-032753	Echinops telfairi	90.23	2.00e-152	531.00
IUUC-Eca-033979	Equus caballus	97.72	2.00e-175	607.00
IUUC-Eeu-034862	Erinaceus europaeus	96.40	1.00e-70	259.00
IUUC-Fca-036110	Felis catus	98.46	5.00e-147	513.00
IUUC-Fal-037648	Ficedula albicollis	97.82	0.00e+00	629.00
IUUC-Fox-037861	Fusarium oxysporum	46.79	2.00e-92	331.00
IUUC-Fso-038405	Fusarium solani	46.79	2.00e-92	331.00
IUUC-Gmo-039383	Gadus morhua	89.91	1.00e-169	588.00
IUUC-Ggr-040082	Gaeumannomyces graminis	44.90	1.00e-81	296.00
IUUC-Gga-040785	Gallus gallus	98.73	7.00e-180	622.00
IUUC-Gac-041645	Gasterosteus aculeatus	91.61	2.00e-168	584.00
IUUC-Gma-044329	Glycine max	58.16	6.00e-123	433.00
IUUC-Ggo-044800	Gorilla gorilla	86.24	1.00e-143	502.00
IUUC-Hsa-045918	Homo sapiens	97.41	8.00e-177	612.00
IUUC-Hvu-047342	Hordeum vulgare	58.84	4.00e-119	420.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	98.82	1.00e-100	358.00
IUUC-Kpa-049149	Komagataella pastoris	33.99	3.00e-36	144.00
IUUC-Lch-050395	Latimeria chalumnae	91.72	5.00e-180	622.00
IUUC-Lpe-051275	Leersia perrieri	58.49	6.00e-120	423.00
IUUC-Loc-052666	Lepisosteus oculatus	91.48	1.00e-166	578.00
IUUC-Lma-053129	Leptosphaeria maculans	44.27	8.00e-85	306.00
IUUC-Laf-054512	Loxodonta africana	97.72	2.00e-175	607.00
IUUC-Mcc-055819	Macaca mulatta	97.41	8.00e-177	612.00
IUUC-Meu-056350	Macropus eugenii	87.30	8.00e-150	522.00
IUUC-Mor-057063	Magnaporthe oryzae	48.09	3.00e-91	328.00
IUUC-Mpo-057369	Magnaporthe poae	45.86	2.00e-82	298.00
IUUC-Mtr-058228	Medicago truncatula	57.65	7.00e-124	436.00
IUUC-Mla-059093	Melampsora laricipopulina	43.38	9.00e-70	256.00
IUUC-Mvi-060285	Microbotryum violaceum	39.88	1.00e-62	233.00
IUUC-Mmr-061685	Microcebus murinus	90.61	8.00e-158	548.00
IUUC-Mdo-062121	Monodelphis domestica	97.72	4.00e-174	603.00
IUUC-Mmu-063216	Mus musculus	97.12	7.00e-178	615.00
IUUC-Mac-065463	Musa acuminata	55.11	5.00e-110	390.00
IUUC-Mpu-066390	Mustela putorius furo	97.12	6.00e-178	615.00
IUUC-Mlu-066932	Myotis lucifugus	97.59	3.00e-166	577.00
IUUC-Nfi-068509	Neosartorya fischeri	48.56	4.00e-93	334.00
IUUC-Ncr-068870	Neurospora crassa	48.73	2.00e-93	335.00
IUUC-Nle-069539	Nomascus leucogenys	97.41	8.00e-177	612.00
IUUC-Opr-070555	Ochotona princeps	84.36	1.00e-154	538.00
IUUC-Ont-071490	Oreochromis niloticus	88.68	2.00e-166	577.00
IUUC-Oan-073044	Ornithorhynchus anatinus	85.71	5.00e-148	516.00
IUUC-Ocu-073764	Oryctolagus cuniculus	97.12	2.00e-178	617.00
IUUC-Oba-075704	Oryza barthii	58.49	6.00e-120	423.00
IUUC-Obr-076455	Oryza brachyantha	58.81	1.00e-119	422.00
IUUC-Ogl-077382	Oryza glaberrima	58.81	4.00e-120	424.00
IUUC-Ogu-078739	Oryza glumaepatula	58.49	4.00e-120	423.00
IUUC-Oin-079072	Oryza indica	58.49	4.00e-120	423.00
IUUC-Olo-080809	Oryza longistaminata	58.49	4.00e-120	423.00
IUUC-Ome-081677	Oryza meridionalis	58.49	1.00e-119	422.00
IUUC-Oni-082937	Oryza nivara	58.49	4.00e-120	423.00
IUUC-Opu-083510	Oryza punctata	58.49	4.00e-120	423.00
IUUC-Oru-084360	Oryza rufipogon	58.49	1.00e-119	422.00
IUUC-Osa-085640	Oryza sativa	58.49	7.00e-120	422.00
IUUC-Ola-086504	Oryzias latipes	88.96	5.00e-168	583.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.64	6.00e-63	233.00
IUUC-Oga-088773	Otolemur garnettii	97.41	2.00e-176	611.00
IUUC-Oar-089677	Ovis aries	96.77	5.00e-174	603.00
IUUC-Ptr-090724	Pan troglodytes	97.28	9.00e-168	582.00
IUUC-Pan-092683	Papio anubis	97.41	8.00e-177	612.00
IUUC-Psi-093415	Pelodiscus sinensis	99.35	7.00e-177	612.00
IUUC-Pma-094562	Petromyzon marinus	80.06	4.00e-165	573.00
IUUC-Pno-095014	Phaeosphaeria nodorum	47.99	1.00e-87	315.00
IUUC-Ppa-095822	Physcomitrella patens	61.94	3.00e-121	427.00
IUUC-Pfo-096579	Poecilia formosa	90.65	4.00e-167	580.00
IUUC-Pab-098313	Pongo abelii	97.41	8.00e-177	612.00
IUUC-Pop-099747	Populus trichocarpa	61.81	1.00e-123	435.00
IUUC-Pca-100871	Procavia capensis	83.21	7.00e-128	449.00
IUUC-Ppe-101389	Prunus persica	62.06	3.00e-124	437.00
IUUC-Pva-102468	Pteropus vampyrus	81.76	4.00e-137	480.00
IUUC-Pgr-103523	Puccinia graminis	42.46	4.00e-73	268.00
IUUC-Ptt-103930	Puccinia triticina	42.32	1.00e-72	266.00
IUUC-Pte-104299	Pyrenophora teres	47.92	1.00e-92	332.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	48.56	1.00e-92	332.00
IUUC-Rno-105796	Rattus norvegicus	97.42	6.00e-177	612.00
IUUC-Sha-107191	Sarcophilus harrisii	97.72	4.00e-174	603.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	37.92	2.00e-63	235.00
IUUC-Spo-108249	Schizosaccharomyces pombe	41.18	4.00e-79	287.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	50.00	2.00e-94	338.00
IUUC-Sit-110805	Setaria italica	57.55	8.00e-119	419.00
IUUC-Sly-111567	Solanum lycopersicum	63.02	3.00e-126	443.00
IUUC-Stu-112562	Solanum tuberosum	63.02	4.00e-127	446.00
IUUC-Sar-112991	Sorex araneus	95.89	1.00e-118	417.00
IUUC-Sbi-114010	Sorghum bicolor	56.29	7.00e-119	419.00
IUUC-Sre-114947	Sporisorium reilianum	42.68	2.00e-73	268.00
IUUC-Ssc-115371	Sus scrofa	97.72	2.00e-175	607.00
IUUC-Tgu-117429	Taeniopygia guttata	96.74	1.00e-176	611.00
IUUC-Tru-118081	Takifugu rubripes	91.32	8.00e-169	585.00
IUUC-Tsy-119101	Tarsius syrichta	84.47	2.00e-147	514.00
IUUC-Tni-120532	Tetraodon nigroviridis	91.29	7.00e-168	582.00
IUUC-Tca-121373	Theobroma cacao	61.71	8.00e-125	439.00
IUUC-Tre-122050	Trichoderma reesei	46.15	2.00e-91	328.00
IUUC-Tvi-122394	Trichoderma virens	46.28	2.00e-85	308.00
IUUC-Tae-124661	Triticum aestivum	58.97	1.00e-118	419.00
IUUC-Tme-126998	Tuber melanosporum	50.96	2.00e-94	338.00
IUUC-Tbe-128032	Tupaia belangeri	97.73	5.00e-177	612.00
IUUC-Ttr-129102	Tursiops truncatus	86.64	4.00e-148	516.00
IUUC-Uma-129363	Ustilago maydis	43.30	1.00e-76	279.00
IUUC-Vda-129891	Verticillium dahliae	50.00	1.00e-93	335.00
IUUC-Vpa-130827	Vicugna pacos	97.07	2.00e-174	604.00
IUUC-Vvi-131202	Vitis vinifera	58.28	2.00e-123	434.00
IUUC-Xtr-132769	Xenopus tropicalis	93.09	6.00e-164	569.00
IUUC-Xma-133147	Xiphophorus maculatus	90.65	8.00e-167	578.00
IUUC-Yli-134352	Yarrowia lipolytica	33.78	4.00e-36	144.00
IUUC-Zma-135294	Zea mays	58.52	1.00e-118	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence