iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049604

Ensembl Protein ID

ENSLACP00000002627.1

UniProt Accession

H2ZZ06; H2ZZ06_LATCH

Genbank Protein ID

ENSLACP00000002627

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01111771

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002349.1	ENSLACT00000002648.1	ENSLACP00000002627.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-31	106.9	505	541
UBD/Beta-Prp	5.40e-48	163.9	395	595

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtd v++laf s+ ++l+s+s Dgt+++WD++++++
   Q: 505  GHTDAVWGLAFsSCqNRLASCSADGTVRIWDTTSHPS 541
           8**********9778****************999875 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++++a+ f++++++l+t+seD t+k+w+l+           + ++++++++h   vl+l +  +g+   sG+ d t+r+w+++
   Q: 395  TLRSHFDGIRALAFHHSEPVLLTASEDCTLKLWNLQktvtakknaalDVEPIYAFRAHRGAVLALVMGSNGENCYSGGVDGTVRCWKIP 483
           7999*********************************************************************************9999 PP
   S: 125  tgqclee...........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtdsvysls.fdsng.kelvsgs 199
                             +l+gh+++v+++++++ +n l+s+s+D+tvr+Wd  +  +++    +++++++ s   f s    ++v+  
   Q: 484  DFNMDPYdnyadpgilcsVLNGHTDAVWGLAFSSCQNRLASCSADGTVRIWDTtSHPSCVSIYNKDNEGRIPSSVaFGSAEpAHVVASY 572
           877665567899**********************99****************96778******999*****8777655544499**999 PP
   S: 200  ldgtvklwdlqtgecvrtlnght 222
             g+  ++dl+t++ + tl+   
   Q: 573  SSGDTVIYDLHTSQPIITLESKV 595
           99*********999998887665 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

PMPGKNGSQS GPNGPGTEPN HQDLTLPGIL HFIQHEWARF EAEKSRWEAE KAELQAQVTF 60
LQGERKGQES LKQDLVRRIK MLEYALKQER AKYHKFKFGT DGNQGDKKGE ASDSVSNGPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATGCCGG GCAAAAACGG GTCCCAAAGC GGACCCAACG GGCCCGGGAC CGAGCCCAAC 60
CACCAGGACC TGACGCTACC GGGCATCCTA CACTTCATCC AGCACGAATG GGCCCGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	55.88	0.00e+00	655.00
IUUC-Aca-004552	Anolis carolinensis	62.40	0.00e+00	793.00
IUUC-Acl-008170	Aspergillus clavatus	26.92	2.00e-31	130.00
IUUC-Ani-009405	Aspergillus nidulans	29.66	9.00e-36	145.00
IUUC-Ate-010457	Aspergillus terreus	27.27	8.00e-33	135.00
IUUC-Bgr-012143	Blumeria graminis	26.34	1.00e-36	148.00
IUUC-Bta-012550	Bos taurus	60.12	0.00e+00	671.00
IUUC-Bci-013742	Botrytis cinerea	26.32	2.00e-36	147.00
IUUC-Cfa-020268	Canis familiaris	63.05	0.00e+00	708.00
IUUC-Cpo-022102	Cavia porcellus	62.36	0.00e+00	719.00
IUUC-Csa-023969	Chlorocebus sabaeus	63.39	0.00e+00	728.00
IUUC-Cgl-026487	Colletotrichum gloeosporioides	24.27	2.00e-20	94.40
IUUC-Dno-029256	Dasypus novemcinctus	74.32	8.00e-148	516.00
IUUC-Dor-031032	Dipodomys ordii	62.11	0.00e+00	703.00
IUUC-Eca-033515	Equus caballus	60.80	0.00e+00	716.00
IUUC-Fca-035749	Felis catus	59.88	0.00e+00	666.00
IUUC-Gmo-039274	Gadus morhua	67.79	1.00e-170	593.00
IUUC-Ggo-045406	Gorilla gorilla	62.82	0.00e+00	728.00
IUUC-Hsa-046341	Homo sapiens	62.82	0.00e+00	729.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	62.15	0.00e+00	707.00
IUUC-Laf-054531	Loxodonta africana	61.01	5.00e-177	613.00
IUUC-Meu-056845	Macropus eugenii	61.73	0.00e+00	723.00
IUUC-Mor-057148	Magnaporthe oryzae	24.66	6.00e-29	122.00
IUUC-Mmr-061153	Microcebus murinus	63.25	0.00e+00	724.00
IUUC-Mdo-062739	Monodelphis domestica	60.50	0.00e+00	689.00
IUUC-Mmu-063564	Mus musculus	64.81	0.00e+00	736.00
IUUC-Mpu-065794	Mustela putorius furo	60.21	0.00e+00	659.00
IUUC-Nle-069587	Nomascus leucogenys	60.08	0.00e+00	670.00
IUUC-Ocu-073953	Oryctolagus cuniculus	58.66	5.00e-168	584.00
IUUC-Ola-086888	Oryzias latipes	64.90	5.00e-168	584.00
IUUC-Oga-088280	Otolemur garnettii	62.44	0.00e+00	711.00
IUUC-Oar-090381	Ovis aries	58.02	0.00e+00	633.00
IUUC-Ptr-090704	Pan troglodytes	62.70	0.00e+00	718.00
IUUC-Pan-092058	Papio anubis	62.96	0.00e+00	728.00
IUUC-Pab-098573	Pongo abelii	61.64	0.00e+00	707.00
IUUC-Pca-100746	Procavia capensis	58.06	1.00e-178	619.00
IUUC-Pva-102823	Pteropus vampyrus	60.80	0.00e+00	706.00
IUUC-Rno-105418	Rattus norvegicus	64.25	0.00e+00	728.00
IUUC-Ssl-108495	Sclerotinia sclerotiorum	26.88	2.00e-35	144.00
IUUC-Ssc-116050	Sus scrofa	65.73	6.00e-165	573.00
IUUC-Tre-122113	Trichoderma reesei	28.38	2.00e-37	150.00
IUUC-Tbe-128127	Tupaia belangeri	58.95	6.00e-146	511.00
IUUC-Ttr-128911	Tursiops truncatus	71.57	1.00e-159	556.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence