iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003779

Ensembl Protein ID

ENSAPLP00000006035.1

UniProt Accession

R0JM22; R0JM22_ANAPL

Genbank Protein ID

EOA98166.1

Protein Name

Lysosomal-trafficking regulator

Genbank Nucleotide ID

ADON01100454

Gene Name

LYST; Anapl_11041

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000006342.1	ENSAPLT00000006672.1	ENSAPLP00000006035.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-07	29.0	3610	3642

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+++t+l f   +  +++s s Dgt+ +WDl 
   Q: 3610 GHTAEITSL-FvckPYSIMISVSKDGTCIIWDLN 3642
           8********.998755789*************85 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

MSSASNSLAR EFLTDVNRLC NAVVQRAEAK EDEEEETHMA ALGQYLVQGR GFILLTTLNS 60
SIDQELTCRE ELLTLLLSLL PLVWKIPVQE EKAIGFNIPS TVDICLTKEN NSSSVKSTQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAGTG CCAGTAACTC ACTGGCACGG GAATTTTTGA CGGATGTCAA TAGACTGTGC 60
AATGCGGTGG TCCAGAGGGC AGAGGCCAAG GAAGATGAAG AGGAAGAAAC TCATATGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR030464--LYST
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0032510--P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0007040--P:lysosome organization
GO:0042267--P:natural killer cell mediated cytotoxicity
GO:0043473--P:pigmentation

KEGG

apla:101802189

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002188	Ailuropoda melanoleuca	72.35	0.00e+00	5516.00
IUUC-Ame-010834	Astyanax mexicanus	61.98	0.00e+00	4558.00
IUUC-Bta-013274	Bos taurus	72.22	0.00e+00	5450.00
IUUC-Cja-019682	Callithrix jacchus	72.77	0.00e+00	5485.00
IUUC-Cfa-020625	Canis familiaris	72.01	0.00e+00	5371.00
IUUC-Cpo-022515	Cavia porcellus	69.22	0.00e+00	5138.00
IUUC-Csa-023804	Chlorocebus sabaeus	72.73	0.00e+00	5470.00
IUUC-Cin-025176	Ciona intestinalis	46.53	4.00e-87	314.00
IUUC-Csv-026108	Ciona savignyi	54.46	0.00e+00	722.00
IUUC-Dre-027544	Danio rerio	64.49	0.00e+00	3471.00
IUUC-Dno-029030	Dasypus novemcinctus	71.22	0.00e+00	5356.00
IUUC-Dor-031065	Dipodomys ordii	68.97	0.00e+00	2420.00
IUUC-Eca-034391	Equus caballus	71.77	0.00e+00	5441.00
IUUC-Fal-037194	Ficedula albicollis	89.29	0.00e+00	6781.00
IUUC-Gmo-039256	Gadus morhua	75.51	0.00e+00	2314.00
IUUC-Gga-040318	Gallus gallus	91.01	0.00e+00	6876.00
IUUC-Gac-042425	Gasterosteus aculeatus	65.97	0.00e+00	3602.00
IUUC-Ggo-045550	Gorilla gorilla	72.39	0.00e+00	5431.00
IUUC-Hsa-046612	Homo sapiens	73.01	0.00e+00	5507.00
IUUC-Laf-054133	Loxodonta africana	72.15	0.00e+00	5354.00
IUUC-Mcc-055373	Macaca mulatta	72.71	0.00e+00	5501.00
IUUC-Mga-059475	Meleagris gallopavo	88.40	0.00e+00	6698.00
IUUC-Mmr-061795	Microcebus murinus	72.65	0.00e+00	5483.00
IUUC-Mlu-067930	Myotis lucifugus	78.04	0.00e+00	2585.00
IUUC-Nle-069205	Nomascus leucogenys	72.07	0.00e+00	5395.00
IUUC-Ont-071764	Oreochromis niloticus	62.41	0.00e+00	4483.00
IUUC-Ocu-074479	Oryctolagus cuniculus	71.26	0.00e+00	5381.00
IUUC-Ptr-091393	Pan troglodytes	72.87	0.00e+00	5499.00
IUUC-Pan-092369	Papio anubis	72.62	0.00e+00	5473.00
IUUC-Pfo-096100	Poecilia formosa	65.90	0.00e+00	3603.00
IUUC-Pab-098733	Pongo abelii	71.64	0.00e+00	5368.00
IUUC-Pca-100429	Procavia capensis	61.51	0.00e+00	1962.00
IUUC-Sha-106595	Sarcophilus harrisii	68.66	0.00e+00	4939.00
IUUC-Sar-113059	Sorex araneus	59.11	0.00e+00	1308.00
IUUC-Ssc-115879	Sus scrofa	67.41	0.00e+00	4925.00
IUUC-Tru-118616	Takifugu rubripes	61.29	0.00e+00	4377.00
IUUC-Tsy-119568	Tarsius syrichta	65.62	0.00e+00	4132.00
IUUC-Tni-120782	Tetraodon nigroviridis	61.17	0.00e+00	4440.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence