iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049271

Ensembl Protein ID

CAY71797

UniProt Accession

C4R872; C4R872_KOMPG

Genbank Protein ID

CAY71797.1

Protein Name

Essential nuclear protein involved in early steps of ribosome biogenesis

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0537

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0537	CAY71797	CAY71797

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-18	61.9	418	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H++ +t+++f   d  +++++s D+t+ +WDl
   Q: 418  HKSAITSISFnpLDeSIVAVSSEDNTVTLWDL 449
           99********995547889999*********7 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MAKRTAEEVN ENKIASVKTD PNAAPEATRV VDNSAENGED IDMEGELVSE EEEILEIDSE 60
GEDDDDQELD ERGASEKAQR VIEKDRKRTE EAEQEGGLYL PHRSKPLGPD EVLEADPSVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAAGA GAACGGCTGA GGAGGTCAAT GAAAACAAAA TTGCCTCTGT GAAAACGGAT 60
CCAAATGCTG CCCCTGAAGC AACAAGGGTT GTGGACAACT CGGCTGAAAA TGGTGAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

ppa:PAS_chr4_0537

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	34.29	1.00e-59	221.00
IUUC-Aml-002309	Ailuropoda melanoleuca	38.43	5.00e-69	252.00
IUUC-Atr-002461	Amborella trichopoda	37.80	5.00e-67	246.00
IUUC-Aca-004760	Anolis carolinensis	38.55	8.00e-67	245.00
IUUC-Aly-005405	Arabidopsis lyrata	38.24	1.00e-67	248.00
IUUC-Ath-007178	Arabidopsis thaliana	38.33	5.00e-69	252.00
IUUC-Ago-007735	Ashbya gossypii	64.32	2.00e-165	573.00
IUUC-Acl-008294	Aspergillus clavatus	47.56	4.00e-108	382.00
IUUC-Afl-008486	Aspergillus flavus	48.82	1.00e-109	388.00
IUUC-Afu-009019	Aspergillus fumigatus	47.10	5.00e-108	382.00
IUUC-Ani-009465	Aspergillus nidulans	48.36	9.00e-108	381.00
IUUC-Ang-009641	Aspergillus niger	46.76	3.00e-108	382.00
IUUC-Ate-010426	Aspergillus terreus	49.19	1.00e-113	400.00
IUUC-Ame-010856	Astyanax mexicanus	36.28	1.00e-67	248.00
IUUC-Bgr-012258	Blumeria graminis	45.37	2.00e-88	317.00
IUUC-Bta-012437	Bos taurus	36.98	2.00e-67	247.00
IUUC-Bci-013647	Botrytis cinerea	48.69	4.00e-106	375.00
IUUC-Bdi-014728	Brachypodium distachyon	37.32	3.00e-70	256.00
IUUC-Bol-015601	Brassica oleracea	38.59	3.00e-68	250.00
IUUC-Bra-017677	Brassica rapa	45.99	4.00e-37	145.00
IUUC-Cel-018454	Caenorhabditis elegans	34.72	7.00e-65	238.00
IUUC-Cja-018859	Callithrix jacchus	36.18	2.00e-68	250.00
IUUC-Cfa-020912	Canis familiaris	38.39	2.00e-69	253.00
IUUC-Cpo-021368	Cavia porcellus	36.78	2.00e-68	250.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	35.02	4.00e-33	133.00
IUUC-Csa-023599	Chlorocebus sabaeus	37.70	4.00e-66	243.00
IUUC-Cin-025718	Ciona intestinalis	39.20	8.00e-70	255.00
IUUC-Csv-025806	Ciona savignyi	39.67	7.00e-54	201.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	43.36	6.00e-84	302.00
IUUC-Cne-026781	Cryptococcus neoformans	41.51	6.00e-79	285.00
IUUC-Cme-027129	Cyanidioschyzon merolae	27.71	2.00e-32	131.00
IUUC-Dre-028225	Danio rerio	36.24	1.00e-68	251.00
IUUC-Dno-029792	Dasypus novemcinctus	36.98	6.00e-65	239.00
IUUC-Dor-030773	Dipodomys ordii	32.27	5.00e-21	93.20
IUUC-Dse-031289	Dothistroma septosporum	48.26	2.00e-107	380.00
IUUC-Dme-031676	Drosophila melanogaster	35.63	9.00e-66	241.00
IUUC-Eca-033618	Equus caballus	38.43	1.00e-66	244.00
IUUC-Fca-036102	Felis catus	37.70	2.00e-67	247.00
IUUC-Fox-037899	Fusarium oxysporum	48.52	1.00e-109	387.00
IUUC-Fso-038130	Fusarium solani	48.52	4.00e-109	386.00
IUUC-Gmo-038741	Gadus morhua	37.83	8.00e-70	255.00
IUUC-Ggr-040086	Gaeumannomyces graminis	47.10	5.00e-102	362.00
IUUC-Gac-042243	Gasterosteus aculeatus	35.76	1.00e-66	244.00
IUUC-Gma-044177	Glycine max	37.38	1.00e-65	241.00
IUUC-Ggo-044564	Gorilla gorilla	36.64	2.00e-68	250.00
IUUC-Hsa-046021	Homo sapiens	37.22	2.00e-67	247.00
IUUC-Hvu-047721	Hordeum vulgare	33.89	3.00e-61	227.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	38.03	6.00e-68	249.00
IUUC-Lch-049974	Latimeria chalumnae	34.55	6.00e-61	226.00
IUUC-Lpe-051388	Leersia perrieri	34.79	8.00e-58	215.00
IUUC-Lma-053010	Leptosphaeria maculans	48.84	2.00e-110	390.00
IUUC-Laf-054058	Loxodonta africana	38.88	2.00e-68	250.00
IUUC-Mcc-055246	Macaca mulatta	37.70	4.00e-66	243.00
IUUC-Meu-056795	Macropus eugenii	36.07	1.00e-63	234.00
IUUC-Mor-057175	Magnaporthe oryzae	46.28	6.00e-100	355.00
IUUC-Mpo-057388	Magnaporthe poae	44.84	4.00e-85	306.00
IUUC-Mtr-057752	Medicago truncatula	38.30	1.00e-67	248.00
IUUC-Mla-058904	Melampsora laricipopulina	39.68	3.00e-77	280.00
IUUC-Mvi-060525	Microbotryum violaceum	40.27	2.00e-78	284.00
IUUC-Mmr-060905	Microcebus murinus	37.44	2.00e-67	247.00
IUUC-Mmu-063428	Mus musculus	38.41	1.00e-67	248.00
IUUC-Mac-065276	Musa acuminata	37.05	2.00e-66	244.00
IUUC-Mpu-066062	Mustela putorius furo	38.17	7.00e-68	248.00
IUUC-Mlu-068115	Myotis lucifugus	41.96	3.00e-41	159.00
IUUC-Nfi-068512	Neosartorya fischeri	47.10	3.00e-106	376.00
IUUC-Ncr-068629	Neurospora crassa	49.03	5.00e-106	375.00
IUUC-Nle-070016	Nomascus leucogenys	36.36	1.00e-63	235.00
IUUC-Ont-072230	Oreochromis niloticus	36.94	2.00e-69	254.00
IUUC-Oan-072759	Ornithorhynchus anatinus	28.61	2.00e-45	174.00
IUUC-Ocu-074511	Oryctolagus cuniculus	37.62	5.00e-64	236.00
IUUC-Oba-075093	Oryza barthii	34.29	9.00e-56	208.00
IUUC-Obr-076130	Oryza brachyantha	34.93	2.00e-63	233.00
IUUC-Ogl-077397	Oryza glaberrima	35.89	9.00e-65	238.00
IUUC-Ogu-078111	Oryza glumaepatula	33.17	1.00e-53	203.00
IUUC-Oin-079564	Oryza indica	33.25	3.00e-58	217.00
IUUC-Olo-080909	Oryza longistaminata	26.58	5.00e-37	146.00
IUUC-Ome-081768	Oryza meridionalis	32.76	9.00e-55	206.00
IUUC-Oni-082453	Oryza nivara	33.10	4.00e-57	214.00
IUUC-Opu-084133	Oryza punctata	32.13	2.00e-49	187.00
IUUC-Oru-085056	Oryza rufipogon	31.62	2.00e-42	163.00
IUUC-Osa-085735	Oryza sativa	34.45	2.00e-64	237.00
IUUC-Ola-087066	Oryzias latipes	35.66	4.00e-62	229.00
IUUC-Olu-087594	Ostreococcus lucimarinus	36.87	1.00e-67	248.00
IUUC-Oga-087974	Otolemur garnettii	36.87	2.00e-68	250.00
IUUC-Oar-089902	Ovis aries	36.98	7.00e-67	245.00
IUUC-Ptr-090469	Pan troglodytes	35.32	6.00e-63	232.00
IUUC-Pan-092858	Papio anubis	37.70	4.00e-66	243.00
IUUC-Psi-094092	Pelodiscus sinensis	30.23	7.00e-31	125.00
IUUC-Pno-094919	Phaeosphaeria nodorum	48.56	4.00e-103	366.00
IUUC-Ppa-095849	Physcomitrella patens	37.33	4.00e-71	259.00
IUUC-Pfo-096535	Poecilia formosa	36.43	3.00e-68	249.00
IUUC-Pab-098478	Pongo abelii	37.22	5.00e-67	246.00
IUUC-Pop-100032	Populus trichocarpa	38.14	3.00e-68	250.00
IUUC-Pca-100403	Procavia capensis	40.85	2.00e-49	186.00
IUUC-Ppe-101997	Prunus persica	36.97	8.00e-68	248.00
IUUC-Pva-102423	Pteropus vampyrus	36.70	9.00e-70	255.00
IUUC-Pgr-103339	Puccinia graminis	40.04	1.00e-84	305.00
IUUC-Ptt-103937	Puccinia triticina	40.36	2.00e-81	294.00
IUUC-Pte-104051	Pyrenophora teres	49.53	2.00e-108	384.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	48.36	3.00e-107	379.00
IUUC-Rno-106118	Rattus norvegicus	37.50	7.00e-65	239.00
IUUC-Sce-106330	Saccharomyces cerevisiae	67.49	2.00e-168	583.00
IUUC-Sha-106564	Sarcophilus harrisii	35.29	3.00e-51	193.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	45.28	1.00e-96	344.00
IUUC-Spo-108351	Schizosaccharomyces pombe	45.01	3.00e-95	340.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	48.71	1.00e-106	377.00
IUUC-Smo-109619	Selaginella moellendorffii	36.51	2.00e-70	257.00
IUUC-Sit-110719	Setaria italica	36.60	2.00e-67	247.00
IUUC-Sly-111245	Solanum lycopersicum	36.43	5.00e-60	223.00
IUUC-Stu-112645	Solanum tuberosum	36.60	2.00e-64	237.00
IUUC-Sar-113342	Sorex araneus	36.72	2.00e-59	221.00
IUUC-Sbi-114359	Sorghum bicolor	36.60	1.00e-66	244.00
IUUC-Sre-115098	Sporisorium reilianum	40.41	6.00e-82	296.00
IUUC-Ssc-115496	Sus scrofa	37.32	6.00e-67	245.00
IUUC-Tru-117662	Takifugu rubripes	35.93	2.00e-67	247.00
IUUC-Tni-120564	Tetraodon nigroviridis	34.14	7.00e-52	195.00
IUUC-Tca-121710	Theobroma cacao	37.77	9.00e-69	251.00
IUUC-Tre-122239	Trichoderma reesei	49.41	2.00e-105	374.00
IUUC-Tvi-122589	Trichoderma virens	50.12	1.00e-106	377.00
IUUC-Tae-125574	Triticum aestivum	37.23	1.00e-69	254.00
IUUC-Tur-126135	Triticum urartu	38.17	2.00e-55	208.00
IUUC-Tme-127073	Tuber melanosporum	44.55	6.00e-93	332.00
IUUC-Ttr-128383	Tursiops truncatus	37.76	6.00e-65	239.00
IUUC-Uma-129345	Ustilago maydis	41.32	5.00e-87	313.00
IUUC-Vda-129893	Verticillium dahliae	48.51	2.00e-107	380.00
IUUC-Vvi-131067	Vitis vinifera	37.83	1.00e-68	251.00
IUUC-Xtr-132603	Xenopus tropicalis	37.15	9.00e-68	248.00
IUUC-Xma-133149	Xiphophorus maculatus	35.76	7.00e-67	245.00
IUUC-Yli-134459	Yarrowia lipolytica	54.32	3.00e-135	473.00
IUUC-Zma-135548	Zea mays	37.08	8.00e-68	248.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence