iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050324

Ensembl Protein ID

ENSLACP00000011575.1

UniProt Accession

H3APK4; H3APK4_LATCH

Genbank Protein ID

ENSLACP00000011575

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01112885

Gene Name

TRIM71

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010185.1	ENSLACT00000011664.1	ENSLACP00000011575.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	31.5	12	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf............................kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e++                            +  ++vlpC H+f+++Cl+ ++++k   s +frCP+C+
   Q: 12   CPLCKEMCgssapissnsstsssssqtsnsstssssR-RLHVLPCLHAFCRQCLEGLKNPK--DSLQFRCPVCD 82
           ****888888888888888888888888787777744.4***************9995555..9*********5 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MASFPEAELQ VCPLCKEMCG SSAPISSNSS TSSSSSQTSN SSTSSSSRRL HVLPCLHAFC 60
RQCLEGLKNP KDSLQFRCPV CDQKVSLSEP GMETLPPSSF LFSELLDVVV AADEQRNNGR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGT TTCCAGAAGC AGAGCTGCAG GTTTGCCCGC TGTGTAAGGA GATGTGCGGC 60
TCCTCGGCTC CGATCTCTTC CAACTCCTCT ACCTCGTCTT CTTCATCTCA GACCTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR001258--NHL_repeat
IPR013017--NHL_repeat_subgr
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50194--FILAMIN_REPEAT
PS51125--NHL
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00630--Filamin
PF01436--NHL
PF00643--zf-B_box

SMART

SM00336--BBOX
SM00557--IG_FLMN
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0010172--P:embryonic body morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001234	Ailuropoda melanoleuca	86.53	0.00e+00	1091.00
IUUC-Apl-003905	Anas platyrhynchos	90.41	0.00e+00	1118.00
IUUC-Aca-004326	Anolis carolinensis	83.77	0.00e+00	1193.00
IUUC-Ame-011573	Astyanax mexicanus	75.09	0.00e+00	1238.00
IUUC-Bta-013395	Bos taurus	84.25	0.00e+00	1182.00
IUUC-Cel-018188	Caenorhabditis elegans	35.52	4.00e-106	379.00
IUUC-Cja-019863	Callithrix jacchus	85.82	0.00e+00	1200.00
IUUC-Cfa-020285	Canis familiaris	85.37	0.00e+00	1193.00
IUUC-Cpo-021879	Cavia porcellus	84.80	0.00e+00	1187.00
IUUC-Csa-024271	Chlorocebus sabaeus	85.82	0.00e+00	1197.00
IUUC-Cho-024376	Choloepus hoffmanni	88.70	0.00e+00	1092.00
IUUC-Cin-025406	Ciona intestinalis	48.89	0.00e+00	653.00
IUUC-Dre-027699	Danio rerio	75.21	0.00e+00	1238.00
IUUC-Dno-029022	Dasypus novemcinctus	88.03	0.00e+00	1093.00
IUUC-Dor-031072	Dipodomys ordii	85.67	0.00e+00	1195.00
IUUC-Dme-031997	Drosophila melanogaster	46.72	1.00e-68	254.00
IUUC-Ete-032228	Echinops telfairi	89.53	0.00e+00	765.00
IUUC-Eca-033373	Equus caballus	89.49	0.00e+00	976.00
IUUC-Eeu-034463	Erinaceus europaeus	88.69	0.00e+00	1062.00
IUUC-Fca-036184	Felis catus	87.37	0.00e+00	1100.00
IUUC-Fal-036918	Ficedula albicollis	80.81	0.00e+00	1140.00
IUUC-Fox-038003	Fusarium oxysporum	32.20	2.00e-03	36.20
IUUC-Gmo-039415	Gadus morhua	70.65	0.00e+00	887.00
IUUC-Gga-040379	Gallus gallus	86.18	0.00e+00	1214.00
IUUC-Gac-042330	Gasterosteus aculeatus	68.65	0.00e+00	1078.00
IUUC-Gma-043819	Glycine max	23.18	7.00e-11	63.20
IUUC-Ggo-045208	Gorilla gorilla	85.82	0.00e+00	1193.00
IUUC-Hsa-045988	Homo sapiens	85.97	0.00e+00	1197.00
IUUC-Itr-048371	Ictidomys tridecemlineatus	89.06	0.00e+00	1102.00
IUUC-Lpe-050809	Leersia perrieri	32.05	1.00e-04	42.40
IUUC-Loc-052322	Lepisosteus oculatus	78.20	0.00e+00	1317.00
IUUC-Laf-054272	Loxodonta africana	84.18	0.00e+00	1162.00
IUUC-Mcc-055125	Macaca mulatta	85.82	0.00e+00	1195.00
IUUC-Meu-055934	Macropus eugenii	78.43	0.00e+00	1084.00
IUUC-Mga-059930	Meleagris gallopavo	89.74	0.00e+00	1108.00
IUUC-Mmr-060662	Microcebus murinus	84.82	0.00e+00	1189.00
IUUC-Mdo-062918	Monodelphis domestica	84.26	0.00e+00	1217.00
IUUC-Mmu-064351	Mus musculus	84.33	0.00e+00	1180.00
IUUC-Mac-065515	Musa acuminata	30.53	2.00e-05	45.10
IUUC-Mpu-066325	Mustela putorius furo	88.52	0.00e+00	971.00
IUUC-Mlu-067171	Myotis lucifugus	81.24	0.00e+00	1121.00
IUUC-Nle-069692	Nomascus leucogenys	85.97	0.00e+00	1196.00
IUUC-Opr-070354	Ochotona princeps	87.84	0.00e+00	1091.00
IUUC-Ont-072125	Oreochromis niloticus	70.94	0.00e+00	1192.00
IUUC-Oan-073079	Ornithorhynchus anatinus	89.74	0.00e+00	1109.00
IUUC-Ocu-073910	Oryctolagus cuniculus	84.93	0.00e+00	1186.00
IUUC-Ola-087162	Oryzias latipes	76.47	0.00e+00	1106.00
IUUC-Oga-088523	Otolemur garnettii	71.76	0.00e+00	1164.00
IUUC-Oar-090009	Ovis aries	86.38	0.00e+00	627.00
IUUC-Ptr-091173	Pan troglodytes	85.97	0.00e+00	1199.00
IUUC-Pan-091750	Papio anubis	85.69	0.00e+00	1192.00
IUUC-Psi-093053	Pelodiscus sinensis	85.98	0.00e+00	1054.00
IUUC-Pma-094227	Petromyzon marinus	57.63	9.00e-175	606.00
IUUC-Pfo-096980	Poecilia formosa	67.80	0.00e+00	1130.00
IUUC-Pab-098189	Pongo abelii	85.82	0.00e+00	1194.00
IUUC-Pva-103126	Pteropus vampyrus	84.25	0.00e+00	1179.00
IUUC-Rno-105653	Rattus norvegicus	76.74	0.00e+00	1261.00
IUUC-Sha-107178	Sarcophilus harrisii	89.54	0.00e+00	1111.00
IUUC-Stu-112510	Solanum tuberosum	31.52	6.00e-08	50.40
IUUC-Sar-113613	Sorex araneus	78.09	0.00e+00	912.00
IUUC-Tgu-116963	Taeniopygia guttata	89.57	0.00e+00	1107.00
IUUC-Tru-117942	Takifugu rubripes	70.39	0.00e+00	1181.00
IUUC-Tsy-119075	Tarsius syrichta	81.16	0.00e+00	980.00
IUUC-Tni-120704	Tetraodon nigroviridis	80.03	0.00e+00	1009.00
IUUC-Tbe-128141	Tupaia belangeri	71.33	0.00e+00	754.00
IUUC-Ttr-128908	Tursiops truncatus	77.13	0.00e+00	634.00
IUUC-Xtr-132272	Xenopus tropicalis	74.97	0.00e+00	1253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence