iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027879

Ensembl Protein ID

ENSDARP00000073678.4

UniProt Accession

E7EYR2; E7EYR2_DANRE

Genbank Protein ID

ENSDARP00000073678

Protein Name

Chromatin assembly factor 1, subunit B

Genbank Nucleotide ID

BX571809

Gene Name

chaf1b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000056473.7	ENSDART00000079222.4	ENSDARP00000073678.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-21	74.1	128	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+++++ sd ++++sGs D+t  +WD+ +g 
   Q: 128  GHIEDVYDISWtSDgNFMASGSVDNTAIMWDVNKGQ 163
           899*********999****************98876 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKVVTCEIAW HNKEPVYSLD FQQSGDGKTQ RLATAGVDTT VRMWRVDKGP DGKAVVEFLS 60
NLARHTKAVN VVRFSPTAEV LASGGDDAAI LLWKLNDNKE PEQTPTFQEE EDAQLNKESW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGTTGTCAT TGTCAGAAAG CTGCGCGGGA AAGACGTCTG TTTGGGTGAA AGCGGGACTT 60
GTTCACGAAG TAACTAAAAC ATTTTTGTTC CGACTGTCGC AGCTTCGATT GACGAAGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005634--C:nucleus
GO:0042393--F:histone binding
GO:0048568--P:embryonic organ development
GO:0000278--P:mitotic cell cycle
GO:0006334--P:nucleosome assembly
GO:0060041--P:retina development in camera-type eye

KEGG

dre:406285

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	39.60	1.00e-85	310.00
IUUC-Aml-001755	Ailuropoda melanoleuca	63.06	0.00e+00	677.00
IUUC-Atr-002674	Amborella trichopoda	35.84	2.00e-89	322.00
IUUC-Apl-003701	Anas platyrhynchos	58.37	0.00e+00	683.00
IUUC-Aca-004692	Anolis carolinensis	58.11	0.00e+00	687.00
IUUC-Aly-006286	Arabidopsis lyrata	38.12	3.00e-88	318.00
IUUC-Ath-007683	Arabidopsis thaliana	37.73	4.00e-89	322.00
IUUC-Ago-007940	Ashbya gossypii	35.75	4.00e-66	245.00
IUUC-Acl-008070	Aspergillus clavatus	42.25	6.00e-45	176.00
IUUC-Afl-008414	Aspergillus flavus	41.04	4.00e-45	176.00
IUUC-Afu-009046	Aspergillus fumigatus	35.15	4.00e-29	123.00
IUUC-Ani-009399	Aspergillus nidulans	42.72	1.00e-44	175.00
IUUC-Ang-009650	Aspergillus niger	38.46	1.00e-41	164.00
IUUC-Aor-009937	Aspergillus oryzae	41.04	4.00e-45	176.00
IUUC-Ate-010505	Aspergillus terreus	36.62	1.00e-29	124.00
IUUC-Ame-011094	Astyanax mexicanus	80.07	0.00e+00	914.00
IUUC-Bgr-012005	Blumeria graminis	40.00	2.00e-41	164.00
IUUC-Bta-013423	Bos taurus	62.86	0.00e+00	680.00
IUUC-Bci-013847	Botrytis cinerea	39.15	1.00e-41	165.00
IUUC-Bdi-014860	Brachypodium distachyon	40.59	3.00e-83	302.00
IUUC-Bol-016603	Brassica oleracea	39.86	2.00e-85	309.00
IUUC-Bra-017175	Brassica rapa	37.58	5.00e-85	308.00
IUUC-Cel-018272	Caenorhabditis elegans	35.43	1.00e-57	217.00
IUUC-Cja-019558	Callithrix jacchus	55.85	0.00e+00	674.00
IUUC-Cfa-020900	Canis familiaris	65.08	0.00e+00	670.00
IUUC-Cpo-022054	Cavia porcellus	73.53	3.00e-173	601.00
IUUC-Csa-023850	Chlorocebus sabaeus	64.79	0.00e+00	684.00
IUUC-Cho-024510	Choloepus hoffmanni	66.55	1.00e-117	416.00
IUUC-Cin-025178	Ciona intestinalis	47.50	3.00e-111	395.00
IUUC-Csv-025885	Ciona savignyi	47.30	2.00e-36	144.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	39.78	4.00e-36	146.00
IUUC-Cne-027015	Cryptococcus neoformans	36.14	1.00e-37	151.00
IUUC-Cme-027136	Cyanidioschyzon merolae	30.72	1.00e-58	220.00
IUUC-Dno-029335	Dasypus novemcinctus	56.96	0.00e+00	689.00
IUUC-Dor-030520	Dipodomys ordii	50.70	4.00e-136	478.00
IUUC-Dse-031566	Dothistroma septosporum	40.65	3.00e-44	173.00
IUUC-Dme-031838	Drosophila melanogaster	46.35	3.00e-109	389.00
IUUC-Eca-033563	Equus caballus	61.20	0.00e+00	696.00
IUUC-Fca-036052	Felis catus	66.80	0.00e+00	677.00
IUUC-Fal-037080	Ficedula albicollis	59.33	0.00e+00	691.00
IUUC-Fox-038022	Fusarium oxysporum	42.06	7.00e-44	172.00
IUUC-Fso-038115	Fusarium solani	40.19	7.00e-41	162.00
IUUC-Gmo-039461	Gadus morhua	79.81	3.00e-155	541.00
IUUC-Ggr-040100	Gaeumannomyces graminis	39.15	7.00e-40	159.00
IUUC-Gga-041133	Gallus gallus	59.11	0.00e+00	689.00
IUUC-Gac-041769	Gasterosteus aculeatus	74.12	0.00e+00	746.00
IUUC-Gma-043339	Glycine max	41.73	4.00e-95	342.00
IUUC-Ggo-044561	Gorilla gorilla	64.41	0.00e+00	679.00
IUUC-Hsa-046150	Homo sapiens	64.73	0.00e+00	682.00
IUUC-Hvu-047792	Hordeum vulgare	39.86	1.00e-55	209.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	64.04	0.00e+00	684.00
IUUC-Kpa-049397	Komagataella pastoris	39.60	6.00e-82	297.00
IUUC-Lch-050365	Latimeria chalumnae	49.41	6.00e-130	457.00
IUUC-Lpe-050875	Leersia perrieri	39.01	1.00e-82	300.00
IUUC-Loc-052770	Lepisosteus oculatus	66.61	0.00e+00	761.00
IUUC-Lma-053291	Leptosphaeria maculans	38.91	4.00e-44	173.00
IUUC-Laf-053505	Loxodonta africana	64.43	0.00e+00	697.00
IUUC-Mcc-054803	Macaca mulatta	64.40	0.00e+00	684.00
IUUC-Meu-056578	Macropus eugenii	58.30	2.00e-169	588.00
IUUC-Mor-057211	Magnaporthe oryzae	39.91	2.00e-40	160.00
IUUC-Mpo-057411	Magnaporthe poae	39.15	1.00e-39	158.00
IUUC-Mtr-058066	Medicago truncatula	43.00	2.00e-95	343.00
IUUC-Mga-059735	Meleagris gallopavo	58.94	0.00e+00	693.00
IUUC-Mmr-061343	Microcebus murinus	56.36	0.00e+00	689.00
IUUC-Mdo-062065	Monodelphis domestica	66.34	0.00e+00	702.00
IUUC-Mmu-063501	Mus musculus	62.06	0.00e+00	676.00
IUUC-Mac-064864	Musa acuminata	38.67	3.00e-84	305.00
IUUC-Mpu-066549	Mustela putorius furo	65.31	0.00e+00	670.00
IUUC-Mlu-067121	Myotis lucifugus	68.74	0.00e+00	641.00
IUUC-Nfi-068462	Neosartorya fischeri	42.72	2.00e-45	177.00
IUUC-Ncr-068838	Neurospora crassa	38.14	7.00e-41	162.00
IUUC-Nle-069854	Nomascus leucogenys	64.98	0.00e+00	683.00
IUUC-Opr-070803	Ochotona princeps	60.55	1.00e-177	616.00
IUUC-Ont-071642	Oreochromis niloticus	71.02	0.00e+00	823.00
IUUC-Oan-073675	Ornithorhynchus anatinus	57.77	0.00e+00	684.00
IUUC-Ocu-073863	Oryctolagus cuniculus	73.28	0.00e+00	637.00
IUUC-Oba-075682	Oryza barthii	39.11	8.00e-79	287.00
IUUC-Obr-076039	Oryza brachyantha	39.60	3.00e-83	302.00
IUUC-Ogu-078021	Oryza glumaepatula	39.85	1.00e-83	304.00
IUUC-Oin-079908	Oryza indica	34.78	2.00e-63	236.00
IUUC-Olo-081063	Oryza longistaminata	39.85	9.00e-84	304.00
IUUC-Ome-081930	Oryza meridionalis	39.85	1.00e-83	303.00
IUUC-Oni-082547	Oryza nivara	39.85	1.00e-83	303.00
IUUC-Opu-084089	Oryza punctata	39.36	4.00e-81	296.00
IUUC-Oru-084844	Oryza rufipogon	39.85	1.00e-83	303.00
IUUC-Osa-085582	Oryza sativa	39.85	1.00e-83	303.00
IUUC-Ola-087187	Oryzias latipes	63.74	0.00e+00	757.00
IUUC-Olu-087792	Ostreococcus lucimarinus	39.61	6.00e-79	288.00
IUUC-Oga-088390	Otolemur garnettii	55.41	0.00e+00	676.00
IUUC-Oar-089740	Ovis aries	62.79	0.00e+00	663.00
IUUC-Ptr-091581	Pan troglodytes	65.31	0.00e+00	683.00
IUUC-Pan-092258	Papio anubis	57.39	3.00e-173	601.00
IUUC-Psi-093761	Pelodiscus sinensis	61.26	0.00e+00	721.00
IUUC-Ppa-095428	Physcomitrella patens	41.97	3.00e-95	342.00
IUUC-Pfo-097357	Poecilia formosa	68.09	0.00e+00	750.00
IUUC-Pab-098520	Pongo abelii	64.98	0.00e+00	681.00
IUUC-Pop-099331	Populus trichocarpa	37.58	5.00e-88	318.00
IUUC-Ppe-101548	Prunus persica	37.47	7.00e-88	318.00
IUUC-Pva-103243	Pteropus vampyrus	59.68	9.00e-174	603.00
IUUC-Pgr-103591	Puccinia graminis	34.12	4.00e-40	160.00
IUUC-Pte-104247	Pyrenophora teres	39.37	2.00e-44	174.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	40.38	3.00e-44	173.00
IUUC-Rno-105202	Rattus norvegicus	62.43	0.00e+00	682.00
IUUC-Sce-106250	Saccharomyces cerevisiae	35.52	2.00e-74	273.00
IUUC-Sha-107036	Sarcophilus harrisii	66.14	0.00e+00	704.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.60	6.00e-76	278.00
IUUC-Spo-108050	Schizosaccharomyces pombe	32.09	7.00e-69	254.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.30	2.00e-42	167.00
IUUC-Sit-109838	Setaria italica	40.05	7.00e-86	311.00
IUUC-Sly-110872	Solanum lycopersicum	40.20	7.00e-86	311.00
IUUC-Stu-111933	Solanum tuberosum	37.25	2.00e-83	302.00
IUUC-Sbi-114587	Sorghum bicolor	39.90	3.00e-85	309.00
IUUC-Ssc-115462	Sus scrofa	62.34	0.00e+00	678.00
IUUC-Tgu-117186	Taeniopygia guttata	58.21	0.00e+00	677.00
IUUC-Tru-118310	Takifugu rubripes	70.89	0.00e+00	781.00
IUUC-Tsy-118927	Tarsius syrichta	55.66	9.00e-129	453.00
IUUC-Tni-120832	Tetraodon nigroviridis	63.25	0.00e+00	747.00
IUUC-Tca-121584	Theobroma cacao	38.25	8.00e-92	330.00
IUUC-Tre-122140	Trichoderma reesei	39.25	1.00e-41	164.00
IUUC-Tvi-122663	Trichoderma virens	39.25	3.00e-41	163.00
IUUC-Tae-123476	Triticum aestivum	39.60	1.00e-85	310.00
IUUC-Tur-126239	Triticum urartu	39.60	8.00e-86	311.00
IUUC-Tme-127108	Tuber melanosporum	39.57	1.00e-82	300.00
IUUC-Ttr-129010	Tursiops truncatus	63.73	0.00e+00	663.00
IUUC-Vda-129825	Verticillium dahliae	41.31	1.00e-42	167.00
IUUC-Vpa-130374	Vicugna pacos	62.16	1.00e-80	294.00
IUUC-Vvi-131136	Vitis vinifera	40.71	2.00e-89	322.00
IUUC-Xtr-132141	Xenopus tropicalis	66.74	0.00e+00	664.00
IUUC-Xma-133980	Xiphophorus maculatus	66.83	0.00e+00	741.00
IUUC-Yli-134457	Yarrowia lipolytica	39.73	2.00e-40	160.00
IUUC-Zma-135321	Zea mays	40.74	1.00e-85	310.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence