iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088390

Ensembl Protein ID

ENSOGAP00000017513.1

UniProt Accession

H0XN22; H0XN22_OTOGA

Genbank Protein ID

ENSOGAP00000017513

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03164624

Gene Name

CHAF1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000034514.1	ENSOGAT00000031901.1	ENSOGAP00000017513.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	69.7	127	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++++++++ ++ +ll+s+s D+t  +WD+++g 
   Q: 127  GHLEDIYDICWaTNgNLLASASVDNTAIIWDVSKGQ 162
           89**********666****************99886 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MKVITCEIAW HNKEPVYSLD FQHGAAGRTH RLASTGVDTA VRIWKVEKGP DGKAIVEFLS 60
NLVRHTKAVN VVRFSPTGDI LASGGDDAVI LLWKVNDNKE PEQIAFQDEE EAQMNKENWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAGTCA TCACGTGCGA GATAGCCTGG CACAACAAGG AGCCGGTGTA CAGCCTGGAC 60
TTCCAGCATG GGGCTGCCGG GAGGACGCAC AGGCTGGCGT CCACTGGCGT GGACACCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029129--CAF1_p60_C
IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF15512--CAF-1_p60_C
PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0000790--C:nuclear chromatin
GO:0005654--C:nucleoplasm
GO:0006335--P:DNA replication-dependent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	39.80	7.00e-81	294.00
IUUC-Aml-001755	Ailuropoda melanoleuca	82.43	0.00e+00	921.00
IUUC-Atr-002674	Amborella trichopoda	40.45	5.00e-86	311.00
IUUC-Apl-003701	Anas platyrhynchos	70.46	0.00e+00	788.00
IUUC-Aca-004692	Anolis carolinensis	71.24	0.00e+00	764.00
IUUC-Aly-006286	Arabidopsis lyrata	40.10	2.00e-84	306.00
IUUC-Ath-007683	Arabidopsis thaliana	38.89	6.00e-84	304.00
IUUC-Ago-007940	Ashbya gossypii	34.76	4.00e-64	238.00
IUUC-Acl-008070	Aspergillus clavatus	42.99	7.00e-44	172.00
IUUC-Afl-008414	Aspergillus flavus	41.31	3.00e-43	169.00
IUUC-Ani-009399	Aspergillus nidulans	42.99	6.00e-43	169.00
IUUC-Ang-009650	Aspergillus niger	39.27	4.00e-41	162.00
IUUC-Aor-009937	Aspergillus oryzae	41.31	4.00e-43	169.00
IUUC-Ate-010505	Aspergillus terreus	35.21	1.00e-27	117.00
IUUC-Ame-011094	Astyanax mexicanus	62.87	0.00e+00	642.00
IUUC-Bgr-012005	Blumeria graminis	38.32	3.00e-38	153.00
IUUC-Bta-013423	Bos taurus	82.38	0.00e+00	893.00
IUUC-Bci-013847	Botrytis cinerea	38.86	7.00e-39	155.00
IUUC-Bdi-014860	Brachypodium distachyon	42.07	5.00e-81	295.00
IUUC-Bol-016603	Brassica oleracea	36.54	4.00e-82	298.00
IUUC-Bra-017175	Brassica rapa	39.35	4.00e-78	285.00
IUUC-Cel-018272	Caenorhabditis elegans	34.00	2.00e-56	213.00
IUUC-Cja-019558	Callithrix jacchus	86.96	0.00e+00	952.00
IUUC-Cfa-020900	Canis familiaris	79.90	0.00e+00	891.00
IUUC-Cpo-022054	Cavia porcellus	76.43	0.00e+00	811.00
IUUC-Csa-023850	Chlorocebus sabaeus	88.89	0.00e+00	979.00
IUUC-Cho-024510	Choloepus hoffmanni	82.35	2.00e-141	495.00
IUUC-Cin-025178	Ciona intestinalis	46.82	1.00e-106	380.00
IUUC-Cgl-026572	Colletotrichum gloeosporioides	43.35	2.00e-36	147.00
IUUC-Cne-027015	Cryptococcus neoformans	31.37	5.00e-36	146.00
IUUC-Cme-027136	Cyanidioschyzon merolae	32.55	3.00e-58	219.00
IUUC-Dre-027879	Danio rerio	54.94	0.00e+00	652.00
IUUC-Dno-029335	Dasypus novemcinctus	85.31	0.00e+00	979.00
IUUC-Dor-030520	Dipodomys ordii	68.83	0.00e+00	729.00
IUUC-Dse-031566	Dothistroma septosporum	39.91	8.00e-42	165.00
IUUC-Dme-031838	Drosophila melanogaster	48.34	2.00e-110	393.00
IUUC-Eca-033563	Equus caballus	86.49	0.00e+00	1001.00
IUUC-Fca-036052	Felis catus	80.71	0.00e+00	900.00
IUUC-Fal-037080	Ficedula albicollis	73.82	0.00e+00	778.00
IUUC-Fox-038022	Fusarium oxysporum	40.85	3.00e-40	160.00
IUUC-Fso-038115	Fusarium solani	41.31	3.00e-39	156.00
IUUC-Gmo-039461	Gadus morhua	70.87	6.00e-134	469.00
IUUC-Ggr-040100	Gaeumannomyces graminis	39.81	8.00e-41	162.00
IUUC-Gga-041133	Gallus gallus	70.28	0.00e+00	784.00
IUUC-Gac-041769	Gasterosteus aculeatus	63.56	0.00e+00	650.00
IUUC-Gma-043339	Glycine max	41.21	3.00e-93	336.00
IUUC-Ggo-044561	Gorilla gorilla	88.21	0.00e+00	967.00
IUUC-Hsa-046150	Homo sapiens	89.07	0.00e+00	978.00
IUUC-Hvu-047792	Hordeum vulgare	38.28	3.00e-50	191.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	87.38	0.00e+00	906.00
IUUC-Kpa-049397	Komagataella pastoris	38.68	2.00e-79	289.00
IUUC-Lch-050365	Latimeria chalumnae	52.35	3.00e-142	498.00
IUUC-Lpe-050875	Leersia perrieri	35.82	9.00e-82	297.00
IUUC-Loc-052770	Lepisosteus oculatus	67.33	0.00e+00	665.00
IUUC-Lma-053291	Leptosphaeria maculans	39.44	1.00e-41	165.00
IUUC-Laf-053505	Loxodonta africana	82.86	0.00e+00	968.00
IUUC-Mcc-054803	Macaca mulatta	88.89	0.00e+00	979.00
IUUC-Meu-056578	Macropus eugenii	69.82	0.00e+00	765.00
IUUC-Mor-057211	Magnaporthe oryzae	40.09	6.00e-40	159.00
IUUC-Mpo-057411	Magnaporthe poae	39.34	6.00e-40	159.00
IUUC-Mtr-058066	Medicago truncatula	42.07	5.00e-92	332.00
IUUC-Mga-059735	Meleagris gallopavo	70.82	0.00e+00	793.00
IUUC-Mvi-060288	Microbotryum violaceum	30.60	2.00e-31	131.00
IUUC-Mmr-061343	Microcebus murinus	91.40	0.00e+00	1062.00
IUUC-Mdo-062065	Monodelphis domestica	78.84	0.00e+00	870.00
IUUC-Mmu-063501	Mus musculus	83.21	0.00e+00	877.00
IUUC-Mac-064864	Musa acuminata	38.81	5.00e-81	295.00
IUUC-Mpu-066549	Mustela putorius furo	80.21	0.00e+00	880.00
IUUC-Mlu-067121	Myotis lucifugus	75.31	0.00e+00	814.00
IUUC-Nfi-068462	Neosartorya fischeri	43.46	3.00e-44	173.00
IUUC-Ncr-068838	Neurospora crassa	37.85	1.00e-39	157.00
IUUC-Nle-069854	Nomascus leucogenys	88.71	0.00e+00	973.00
IUUC-Opr-070803	Ochotona princeps	77.42	0.00e+00	865.00
IUUC-Ont-071642	Oreochromis niloticus	63.93	0.00e+00	650.00
IUUC-Oan-073675	Ornithorhynchus anatinus	75.32	0.00e+00	837.00
IUUC-Ocu-073863	Oryctolagus cuniculus	93.72	0.00e+00	768.00
IUUC-Oba-075682	Oryza barthii	39.50	6.00e-77	281.00
IUUC-Obr-076039	Oryza brachyantha	41.31	5.00e-83	301.00
IUUC-Ogu-078021	Oryza glumaepatula	40.25	3.00e-81	295.00
IUUC-Oin-079908	Oryza indica	35.42	4.00e-61	228.00
IUUC-Olo-081063	Oryza longistaminata	40.25	2.00e-81	296.00
IUUC-Ome-081930	Oryza meridionalis	40.00	2.00e-80	293.00
IUUC-Oni-082547	Oryza nivara	40.25	2.00e-81	296.00
IUUC-Opu-084089	Oryza punctata	39.75	1.00e-78	288.00
IUUC-Oru-084844	Oryza rufipogon	40.25	3.00e-81	295.00
IUUC-Osa-085582	Oryza sativa	40.25	3.00e-81	295.00
IUUC-Ola-087187	Oryzias latipes	60.07	0.00e+00	659.00
IUUC-Olu-087792	Ostreococcus lucimarinus	39.55	8.00e-78	284.00
IUUC-Oar-089740	Ovis aries	82.67	0.00e+00	870.00
IUUC-Ptr-091581	Pan troglodytes	88.89	0.00e+00	978.00
IUUC-Pan-092258	Papio anubis	82.33	0.00e+00	896.00
IUUC-Psi-093761	Pelodiscus sinensis	73.18	0.00e+00	828.00
IUUC-Ppa-095428	Physcomitrella patens	41.36	7.00e-91	328.00
IUUC-Pfo-097357	Poecilia formosa	73.45	0.00e+00	647.00
IUUC-Pab-098520	Pongo abelii	88.53	0.00e+00	978.00
IUUC-Pop-099331	Populus trichocarpa	37.45	1.00e-85	310.00
IUUC-Ppe-101548	Prunus persica	40.10	1.00e-85	310.00
IUUC-Pva-103243	Pteropus vampyrus	83.95	0.00e+00	863.00
IUUC-Pgr-103591	Puccinia graminis	32.96	5.00e-35	142.00
IUUC-Pte-104247	Pyrenophora teres	39.44	2.00e-41	164.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	39.44	2.00e-41	164.00
IUUC-Rno-105202	Rattus norvegicus	82.82	0.00e+00	877.00
IUUC-Sce-106250	Saccharomyces cerevisiae	35.23	1.00e-73	270.00
IUUC-Sha-107036	Sarcophilus harrisii	80.00	0.00e+00	904.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.56	5.00e-75	275.00
IUUC-Spo-108050	Schizosaccharomyces pombe	32.67	1.00e-70	260.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.04	3.00e-39	156.00
IUUC-Sit-109838	Setaria italica	42.64	7.00e-84	304.00
IUUC-Sly-110872	Solanum lycopersicum	38.99	2.00e-82	299.00
IUUC-Stu-111933	Solanum tuberosum	38.75	3.00e-79	288.00
IUUC-Sbi-114587	Sorghum bicolor	42.11	3.00e-84	305.00
IUUC-Ssc-115462	Sus scrofa	83.93	0.00e+00	946.00
IUUC-Tgu-117186	Taeniopygia guttata	73.17	0.00e+00	759.00
IUUC-Tru-118310	Takifugu rubripes	64.07	0.00e+00	659.00
IUUC-Tsy-118927	Tarsius syrichta	81.74	0.00e+00	735.00
IUUC-Tni-120832	Tetraodon nigroviridis	58.05	0.00e+00	636.00
IUUC-Tca-121584	Theobroma cacao	42.71	1.00e-86	313.00
IUUC-Tre-122140	Trichoderma reesei	39.72	2.00e-39	157.00
IUUC-Tvi-122663	Trichoderma virens	41.12	8.00e-40	158.00
IUUC-Tae-124502	Triticum aestivum	39.80	1.00e-80	293.00
IUUC-Tur-126239	Triticum urartu	39.80	5.00e-81	295.00
IUUC-Tme-127108	Tuber melanosporum	39.06	1.00e-78	287.00
IUUC-Ttr-129010	Tursiops truncatus	86.38	0.00e+00	962.00
IUUC-Vda-129825	Verticillium dahliae	43.87	6.00e-42	165.00
IUUC-Vpa-130374	Vicugna pacos	77.38	2.00e-99	356.00
IUUC-Vvi-131136	Vitis vinifera	40.35	3.00e-83	302.00
IUUC-Xtr-132141	Xenopus tropicalis	72.73	0.00e+00	691.00
IUUC-Xma-133980	Xiphophorus maculatus	73.45	0.00e+00	648.00
IUUC-Yli-134457	Yarrowia lipolytica	37.95	6.00e-37	149.00
IUUC-Zma-135321	Zea mays	41.96	2.00e-84	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence