iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048126

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01099512

Gene Name

TRIM40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000001956.2	ENSSTOT00000001953.2	ENSSTOP00000001741.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-08	33.8	14	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e++k+  ++++C+H+f++ Cl q++   k ++s++  CPlCr
   Q: 14   CPICQEHLKE-AVSTDCKHLFCRVCLaQHM--EKALASGALCCPLCR 57
           ********99.999************9888..8889**********8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MVSLQEDRQE EAVCPICQEH LKEAVSTDCK HLFCRVCLAQ HMEKALASGA LCCPLCRKPY 60
SEGVLGEGYI CHKHQKRFQR FCEKSKCLLC VECLESPEHQ SHSEPTIETA ISHYKKRLTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCTCTT TACAAGAGGA CAGACAGGAG GAGGCTGTCT GCCCCATCTG CCAAGAACAC 60
CTGAAGGAGG CTGTGAGCAC GGACTGCAAA CACCTCTTCT GTCGTGTGTG CCTGGCCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR010989--SNARE
IPR000315--Znf_B-box
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0008385--C:IkappaB kinase complex
GO:0016020--C:membrane
GO:0008270--F:zinc ion binding
GO:0032088--P:negative regulation of NF-kappaB transcription factor activity
GO:0042177--P:negative regulation of protein catabolic process
GO:1900181--P:negative regulation of protein localization to nucleus
GO:0045116--P:protein neddylation
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001427	Ailuropoda melanoleuca	52.72	2.00e-51	195.00
IUUC-Bta-012543	Bos taurus	55.70	3.00e-60	224.00
IUUC-Bci-013584	Botrytis cinerea	48.65	9.00e-05	40.40
IUUC-Cja-018793	Callithrix jacchus	57.98	5.00e-60	223.00
IUUC-Csa-023101	Chlorocebus sabaeus	61.70	3.00e-75	273.00
IUUC-Cho-024926	Choloepus hoffmanni	75.00	4.00e-25	107.00
IUUC-Dno-029338	Dasypus novemcinctus	50.40	1.00e-50	192.00
IUUC-Dor-030164	Dipodomys ordii	67.40	1.00e-72	265.00
IUUC-Dse-031337	Dothistroma septosporum	35.53	6.00e-07	48.10
IUUC-Ete-032446	Echinops telfairi	44.96	2.00e-43	168.00
IUUC-Eca-034042	Equus caballus	66.38	1.00e-78	285.00
IUUC-Eeu-034444	Erinaceus europaeus	52.86	4.00e-54	204.00
IUUC-Ggo-044410	Gorilla gorilla	67.51	3.00e-78	284.00
IUUC-Hsa-045978	Homo sapiens	66.67	7.00e-77	279.00
IUUC-Laf-054019	Loxodonta africana	54.43	2.00e-49	188.00
IUUC-Mcc-054616	Macaca mulatta	67.93	8.00e-87	312.00
IUUC-Meu-055981	Macropus eugenii	36.79	2.00e-30	125.00
IUUC-Mdo-062958	Monodelphis domestica	38.10	6.00e-34	136.00
IUUC-Mmu-063571	Mus musculus	60.57	9.00e-80	289.00
IUUC-Nle-069843	Nomascus leucogenys	59.84	2.00e-24	104.00
IUUC-Opr-071083	Ochotona princeps	54.13	3.00e-66	244.00
IUUC-Ocu-073939	Oryctolagus cuniculus	66.53	1.00e-70	259.00
IUUC-Oga-088040	Otolemur garnettii	66.67	6.00e-79	286.00
IUUC-Oar-089914	Ovis aries	56.86	8.00e-71	259.00
IUUC-Ptr-091240	Pan troglodytes	57.87	4.00e-67	247.00
IUUC-Pan-092095	Papio anubis	68.14	3.00e-82	297.00
IUUC-Pab-098406	Pongo abelii	67.93	9.00e-79	286.00
IUUC-Pca-101043	Procavia capensis	58.95	4.00e-67	247.00
IUUC-Pva-102651	Pteropus vampyrus	61.44	2.00e-79	288.00
IUUC-Rno-106090	Rattus norvegicus	56.73	3.00e-72	264.00
IUUC-Smo-109224	Selaginella moellendorffii	44.68	1.00e-05	43.50
IUUC-Ssc-115942	Sus scrofa	60.67	6.00e-76	276.00
IUUC-Tsy-119497	Tarsius syrichta	61.00	4.00e-80	290.00
IUUC-Tbe-127279	Tupaia belangeri	61.09	3.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence