iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129913

Ensembl Protein ID

EGY16885

UniProt Accession

G2XD17; G2XD17_VERDV

Genbank Protein ID

EGY16885.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

DS572713

Gene Name

VDAG_08049

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_08049	EGY16885	EGY16885

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-17	61.0	13	45

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH++ v++laf  ++++l+sG   g + +WDl+
   Q: 13   GHKAQVHALAFvgNNDRLASGDAEGYVALWDLT 45
           8***********8779***************86 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MPETPHPRTI LRGHKAQVHA LAFVGNNDRL ASGDAEGYVA LWDLTIMRPT AVWRPHDNAI 60
LGIQGWGADR IITHGRDHKL AVWKLATSDE ANLSKKLPLD DTSESRPQPW LLHLIDVNTM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGAAA CACCACACCC ACGAACAATC CTTCGCGGCC ACAAAGCTCA AGTGCACGCT 60
CTCGCCTTTG TCGGCAACAA TGACCGTCTC GCCAGTGGTG ACGCCGAGGG CTATGTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070209--C:ASTRA complex
GO:0005829--C:cytosol
GO:0006338--P:chromatin remodeling

KEGG

vda:VDAG_08049

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001556	Ailuropoda melanoleuca	29.14	1.00e-21	94.70
IUUC-Atr-002691	Amborella trichopoda	29.68	2.00e-11	61.60
IUUC-Apl-003227	Anas platyrhynchos	25.71	2.00e-20	90.90
IUUC-Aly-006168	Arabidopsis lyrata	24.67	8.00e-19	86.30
IUUC-Ath-007145	Arabidopsis thaliana	23.94	8.00e-19	85.90
IUUC-Acl-008132	Aspergillus clavatus	41.53	3.00e-87	313.00
IUUC-Afl-008655	Aspergillus flavus	44.18	8.00e-87	311.00
IUUC-Afu-008778	Aspergillus fumigatus	40.54	1.00e-81	295.00
IUUC-Ani-009128	Aspergillus nidulans	39.47	3.00e-46	176.00
IUUC-Ang-009760	Aspergillus niger	43.66	9.00e-86	308.00
IUUC-Bgr-012119	Blumeria graminis	44.77	8.00e-101	358.00
IUUC-Bta-012556	Bos taurus	30.31	3.00e-25	107.00
IUUC-Bci-013869	Botrytis cinerea	38.19	4.00e-60	223.00
IUUC-Bdi-014151	Brachypodium distachyon	24.16	2.00e-11	61.60
IUUC-Bol-016319	Brassica oleracea	24.28	2.00e-18	84.70
IUUC-Bra-016675	Brassica rapa	25.33	5.00e-19	86.70
IUUC-Cja-019523	Callithrix jacchus	26.49	1.00e-20	92.00
IUUC-Cfa-021217	Canis familiaris	28.70	3.00e-20	90.90
IUUC-Cpo-021506	Cavia porcellus	26.97	9.00e-20	89.00
IUUC-Csa-023674	Chlorocebus sabaeus	24.94	4.00e-18	83.60
IUUC-Cgl-026723	Colletotrichum gloeosporioides	61.98	2.00e-138	483.00
IUUC-Cne-026836	Cryptococcus neoformans	24.57	3.00e-22	97.40
IUUC-Cme-027295	Cyanidioschyzon merolae	23.99	4.00e-09	53.90
IUUC-Dre-027592	Danio rerio	25.32	2.00e-23	100.00
IUUC-Dno-029880	Dasypus novemcinctus	31.61	5.00e-15	73.20
IUUC-Dor-030266	Dipodomys ordii	27.39	3.00e-13	67.00
IUUC-Dse-031212	Dothistroma septosporum	45.10	3.00e-87	313.00
IUUC-Dme-032209	Drosophila melanogaster	23.50	5.00e-12	63.20
IUUC-Eca-033371	Equus caballus	26.15	3.00e-21	94.00
IUUC-Fca-035558	Felis catus	28.29	6.00e-22	96.30
IUUC-Fal-036794	Ficedula albicollis	24.36	2.00e-22	98.20
IUUC-Fox-037740	Fusarium oxysporum	68.06	5.00e-28	113.00
IUUC-Fso-038156	Fusarium solani	48.20	5.00e-89	319.00
IUUC-Gmo-038742	Gadus morhua	27.46	2.00e-18	84.70
IUUC-Ggr-039849	Gaeumannomyces graminis	56.52	7.00e-82	295.00
IUUC-Gga-040868	Gallus gallus	24.81	2.00e-23	101.00
IUUC-Gac-041646	Gasterosteus aculeatus	25.52	4.00e-19	86.70
IUUC-Gma-044269	Glycine max	25.65	3.00e-19	87.40
IUUC-Ggo-044553	Gorilla gorilla	25.97	4.00e-20	90.10
IUUC-Hsa-046217	Homo sapiens	26.23	2.00e-20	91.70
IUUC-Hvu-047647	Hordeum vulgare	25.26	2.00e-13	68.60
IUUC-Itr-048649	Ictidomys tridecemlineatus	24.74	8.00e-19	85.90
IUUC-Lch-050134	Latimeria chalumnae	28.68	6.00e-28	116.00
IUUC-Lpe-051524	Leersia perrieri	24.12	2.00e-13	68.20
IUUC-Loc-051757	Lepisosteus oculatus	25.31	5.00e-17	80.10
IUUC-Laf-053733	Loxodonta africana	27.14	4.00e-20	90.10
IUUC-Mcc-055477	Macaca mulatta	25.86	2.00e-16	78.20
IUUC-Meu-056758	Macropus eugenii	23.42	1.00e-12	65.10
IUUC-Mor-057289	Magnaporthe oryzae	56.54	1.00e-86	311.00
IUUC-Mpo-057309	Magnaporthe poae	57.66	3.00e-84	303.00
IUUC-Mtr-058616	Medicago truncatula	26.80	9.00e-20	89.40
IUUC-Mga-059637	Meleagris gallopavo	25.49	1.00e-13	67.80
IUUC-Mvi-060385	Microbotryum violaceum	32.02	3.00e-44	170.00
IUUC-Mmr-061675	Microcebus murinus	28.48	1.00e-21	95.50
IUUC-Mdo-062782	Monodelphis domestica	26.41	1.00e-20	92.00
IUUC-Mmu-064058	Mus musculus	27.02	3.00e-24	103.00
IUUC-Mac-065262	Musa acuminata	29.81	2.00e-10	58.50
IUUC-Mpu-066633	Mustela putorius furo	25.47	7.00e-18	83.20
IUUC-Mlu-067333	Myotis lucifugus	26.68	5.00e-18	83.20
IUUC-Nfi-068581	Neosartorya fischeri	41.27	8.00e-84	302.00
IUUC-Ncr-068680	Neurospora crassa	60.46	9.00e-91	325.00
IUUC-Nle-069485	Nomascus leucogenys	24.87	2.00e-15	74.30
IUUC-Oan-073361	Ornithorhynchus anatinus	21.51	7.00e-12	62.40
IUUC-Ocu-073923	Oryctolagus cuniculus	31.52	2.00e-20	91.70
IUUC-Obr-076879	Oryza brachyantha	26.17	4.00e-17	80.50
IUUC-Ogl-077813	Oryza glaberrima	25.14	4.00e-16	77.40
IUUC-Oin-080131	Oryza indica	25.14	4.00e-16	77.40
IUUC-Ome-081912	Oryza meridionalis	23.54	1.00e-11	62.40
IUUC-Oni-082813	Oryza nivara	23.20	3.00e-12	64.30
IUUC-Opu-083663	Oryza punctata	25.55	9.00e-19	85.90
IUUC-Oru-085102	Oryza rufipogon	23.59	1.00e-12	65.90
IUUC-Osa-086204	Oryza sativa	25.14	4.00e-16	77.40
IUUC-Ola-086541	Oryzias latipes	25.69	4.00e-19	87.00
IUUC-Olu-087776	Ostreococcus lucimarinus	26.37	2.00e-09	53.50
IUUC-Oga-088039	Otolemur garnettii	29.02	2.00e-21	94.40
IUUC-Oar-089704	Ovis aries	40.30	5.00e-09	50.10
IUUC-Ptr-091291	Pan troglodytes	25.97	4.00e-20	90.10
IUUC-Pan-092644	Papio anubis	25.77	5.00e-20	89.70
IUUC-Psi-093646	Pelodiscus sinensis	25.96	1.00e-23	102.00
IUUC-Pno-095017	Phaeosphaeria nodorum	37.36	1.00e-38	152.00
IUUC-Ppa-095698	Physcomitrella patens	28.72	3.00e-30	123.00
IUUC-Pfo-096601	Poecilia formosa	26.29	2.00e-21	94.40
IUUC-Pab-098407	Pongo abelii	25.97	4.00e-20	90.10
IUUC-Pop-099193	Populus trichocarpa	26.61	3.00e-19	87.80
IUUC-Pca-100366	Procavia capensis	27.87	2.00e-22	97.80
IUUC-Ppe-101608	Prunus persica	26.98	1.00e-21	95.10
IUUC-Pva-102775	Pteropus vampyrus	25.71	6.00e-18	82.80
IUUC-Pte-104132	Pyrenophora teres	42.75	4.00e-52	197.00
IUUC-Pyt-104808	Pyrenophora triticirepentis	50.83	3.00e-31	127.00
IUUC-Rno-105626	Rattus norvegicus	26.99	5.00e-23	99.80
IUUC-Sha-106539	Sarcophilus harrisii	26.15	2.00e-19	87.80
IUUC-Sja-107694	Schizosaccharomyces japonicus	29.78	4.00e-44	170.00
IUUC-Spo-108326	Schizosaccharomyces pombe	31.20	4.00e-40	156.00
IUUC-Smo-108756	Selaginella moellendorffii	26.23	1.00e-15	75.50
IUUC-Sit-109771	Setaria italica	25.13	1.00e-16	78.60
IUUC-Sly-111138	Solanum lycopersicum	24.66	4.00e-21	94.00
IUUC-Stu-112425	Solanum tuberosum	24.46	2.00e-21	94.70
IUUC-Sbi-114356	Sorghum bicolor	24.86	8.00e-16	76.30
IUUC-Sre-115086	Sporisorium reilianum	28.83	5.00e-23	99.80
IUUC-Ssc-115256	Sus scrofa	25.81	2.00e-19	87.80
IUUC-Tgu-116774	Taeniopygia guttata	26.58	2.00e-15	73.90
IUUC-Tru-117900	Takifugu rubripes	25.45	8.00e-18	82.80
IUUC-Tsy-119540	Tarsius syrichta	32.71	1.00e-08	51.60
IUUC-Tni-120252	Tetraodon nigroviridis	26.90	4.00e-22	96.70
IUUC-Tca-121717	Theobroma cacao	24.14	2.00e-17	81.30
IUUC-Tre-122069	Trichoderma reesei	54.00	3.00e-125	439.00
IUUC-Tvi-122673	Trichoderma virens	53.77	1.00e-126	444.00
IUUC-Tae-123434	Triticum aestivum	25.00	9.00e-15	72.80
IUUC-Tme-127222	Tuber melanosporum	43.44	3.00e-76	276.00
IUUC-Ttr-129240	Tursiops truncatus	31.09	4.00e-12	63.50
IUUC-Uma-129437	Ustilago maydis	30.63	5.00e-26	109.00
IUUC-Vvi-131718	Vitis vinifera	22.45	3.00e-17	80.90
IUUC-Xtr-132109	Xenopus tropicalis	25.19	1.00e-18	85.10
IUUC-Xma-133366	Xiphophorus maculatus	27.13	1.00e-20	91.70
IUUC-Yli-134383	Yarrowia lipolytica	28.80	2.00e-33	134.00
IUUC-Zma-135563	Zea mays	22.98	1.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence