iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049696

Ensembl Protein ID

ENSLACP00000002900.1

UniProt Accession

H2ZZS9; H2ZZS9_LATCH

Genbank Protein ID

ENSLACP00000002900

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01173064

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002593.1	ENSLACT00000002923.1	ENSLACP00000002900.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-16	59.0	227	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrt 32
           H   v++l+f ++   +l+s++dD+++k WD+r 
   Q: 227  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDTRN 260
           8999*******555899**************875 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTQ QTAETDAIRF LVGTQSLKYD NQIHIIDFDD ENNIINKNVL 60
LHQVGEIWHI STSPSDKSVL ATCYNKTSDS KVMTCAAVWR MPKDLESGSH ESPDDSSSNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCTTGTG AGAGTTCAGG ATTGAGCAGC CGGGGAGAAA AAAAAAACAA ACAAGCAGAG 60
AGATGAAAAC ATAATTTTTT TTTCAGACCA AGTTTACATA GTGGTTAGAT CAGTGACACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	33.22	5.00e-41	161.00
IUUC-Aml-002348	Ailuropoda melanoleuca	85.89	3.00e-121	427.00
IUUC-Atr-003028	Amborella trichopoda	33.88	8.00e-55	207.00
IUUC-Apl-004211	Anas platyrhynchos	82.65	1.00e-180	625.00
IUUC-Aca-004893	Anolis carolinensis	91.73	0.00e+00	684.00
IUUC-Aly-005975	Arabidopsis lyrata	33.69	1.00e-51	196.00
IUUC-Ath-006902	Arabidopsis thaliana	33.07	5.00e-53	201.00
IUUC-Ame-010619	Astyanax mexicanus	88.11	0.00e+00	673.00
IUUC-Bta-013035	Bos taurus	84.24	0.00e+00	669.00
IUUC-Bdi-014619	Brachypodium distachyon	33.77	3.00e-54	205.00
IUUC-Bol-016581	Brassica oleracea	33.16	4.00e-52	197.00
IUUC-Bra-017885	Brassica rapa	32.45	1.00e-52	199.00
IUUC-Cel-018344	Caenorhabditis elegans	34.65	4.00e-57	214.00
IUUC-Cja-018975	Callithrix jacchus	82.37	0.00e+00	660.00
IUUC-Cfa-020214	Canis familiaris	88.11	0.00e+00	658.00
IUUC-Cpo-021363	Cavia porcellus	86.30	0.00e+00	627.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	28.46	2.00e-41	162.00
IUUC-Csa-023240	Chlorocebus sabaeus	89.41	0.00e+00	646.00
IUUC-Cho-024713	Choloepus hoffmanni	83.57	4.00e-176	610.00
IUUC-Cin-025678	Ciona intestinalis	47.68	5.00e-106	377.00
IUUC-Csv-026022	Ciona savignyi	48.60	5.00e-104	370.00
IUUC-Dre-027817	Danio rerio	87.34	0.00e+00	706.00
IUUC-Dno-030097	Dasypus novemcinctus	90.18	0.00e+00	655.00
IUUC-Dme-031866	Drosophila melanogaster	39.59	9.00e-77	280.00
IUUC-Ete-032575	Echinops telfairi	77.20	4.00e-131	460.00
IUUC-Eca-034323	Equus caballus	89.74	2.00e-142	498.00
IUUC-Eeu-035217	Erinaceus europaeus	69.25	5.00e-136	476.00
IUUC-Fca-035709	Felis catus	87.88	4.00e-167	580.00
IUUC-Fal-036989	Ficedula albicollis	91.21	0.00e+00	667.00
IUUC-Gmo-038623	Gadus morhua	74.23	5.00e-163	566.00
IUUC-Gga-040157	Gallus gallus	90.18	0.00e+00	664.00
IUUC-Gac-041368	Gasterosteus aculeatus	63.41	5.00e-118	417.00
IUUC-Gma-044196	Glycine max	31.62	5.00e-51	194.00
IUUC-Ggo-044513	Gorilla gorilla	83.74	0.00e+00	631.00
IUUC-Hsa-046844	Homo sapiens	83.33	0.00e+00	630.00
IUUC-Hvu-047435	Hordeum vulgare	33.25	1.00e-55	209.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	87.46	7.00e-145	506.00
IUUC-Lpe-050988	Leersia perrieri	32.54	7.00e-42	164.00
IUUC-Loc-052440	Lepisosteus oculatus	93.81	0.00e+00	701.00
IUUC-Laf-054088	Loxodonta africana	89.92	0.00e+00	645.00
IUUC-Mcc-055575	Macaca mulatta	82.52	4.00e-174	603.00
IUUC-Meu-056807	Macropus eugenii	67.63	2.00e-138	485.00
IUUC-Mtr-058599	Medicago truncatula	32.43	4.00e-52	197.00
IUUC-Mga-059336	Meleagris gallopavo	87.34	4.00e-179	620.00
IUUC-Mmr-061706	Microcebus murinus	89.92	0.00e+00	662.00
IUUC-Mdo-062736	Monodelphis domestica	90.44	0.00e+00	639.00
IUUC-Mmu-064265	Mus musculus	87.08	0.00e+00	684.00
IUUC-Mac-065342	Musa acuminata	31.75	6.00e-51	194.00
IUUC-Mpu-066514	Mustela putorius furo	86.56	0.00e+00	682.00
IUUC-Mlu-067072	Myotis lucifugus	86.29	4.00e-104	370.00
IUUC-Nle-069307	Nomascus leucogenys	80.19	2.00e-171	595.00
IUUC-Opr-070283	Ochotona princeps	69.25	2.00e-140	491.00
IUUC-Ont-072532	Oreochromis niloticus	85.27	0.00e+00	637.00
IUUC-Oan-073222	Ornithorhynchus anatinus	88.70	0.00e+00	639.00
IUUC-Oba-075849	Oryza barthii	33.57	8.00e-43	167.00
IUUC-Obr-076488	Oryza brachyantha	31.79	3.00e-47	182.00
IUUC-Ogl-077928	Oryza glaberrima	34.24	2.00e-45	176.00
IUUC-Ogu-077997	Oryza glumaepatula	33.57	7.00e-43	167.00
IUUC-Oin-079848	Oryza indica	34.24	6.00e-45	174.00
IUUC-Oni-082492	Oryza nivara	33.57	8.00e-43	167.00
IUUC-Oru-085119	Oryza rufipogon	33.57	7.00e-43	167.00
IUUC-Osa-086152	Oryza sativa	34.24	2.00e-45	176.00
IUUC-Ola-086694	Oryzias latipes	76.61	0.00e+00	641.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.33	8.00e-27	113.00
IUUC-Oga-088180	Otolemur garnettii	88.67	2.00e-142	498.00
IUUC-Oar-089621	Ovis aries	66.11	3.00e-130	457.00
IUUC-Ptr-091053	Pan troglodytes	84.50	1.00e-180	625.00
IUUC-Pan-091918	Papio anubis	88.89	0.00e+00	641.00
IUUC-Psi-093545	Pelodiscus sinensis	91.47	0.00e+00	656.00
IUUC-Pma-094439	Petromyzon marinus	75.32	4.00e-172	597.00
IUUC-Pfo-096127	Poecilia formosa	86.05	0.00e+00	669.00
IUUC-Pab-097916	Pongo abelii	80.68	1.00e-179	622.00
IUUC-Pop-098864	Populus trichocarpa	31.93	3.00e-51	195.00
IUUC-Pca-100797	Procavia capensis	75.19	4.00e-115	407.00
IUUC-Ppe-101796	Prunus persica	32.29	2.00e-54	205.00
IUUC-Pva-103228	Pteropus vampyrus	79.23	1.00e-180	625.00
IUUC-Rno-104877	Rattus norvegicus	86.82	0.00e+00	652.00
IUUC-Sha-106940	Sarcophilus harrisii	89.95	0.00e+00	672.00
IUUC-Smo-109355	Selaginella moellendorffii	32.36	2.00e-58	219.00
IUUC-Sit-109958	Setaria italica	33.60	1.00e-54	207.00
IUUC-Sly-111871	Solanum lycopersicum	32.80	2.00e-51	196.00
IUUC-Stu-112128	Solanum tuberosum	31.35	2.00e-48	186.00
IUUC-Sar-113084	Sorex araneus	73.89	3.00e-112	397.00
IUUC-Sbi-114122	Sorghum bicolor	32.98	3.00e-54	205.00
IUUC-Ssc-115385	Sus scrofa	83.72	0.00e+00	634.00
IUUC-Tgu-117090	Taeniopygia guttata	88.74	0.00e+00	639.00
IUUC-Tru-118548	Takifugu rubripes	77.09	0.00e+00	627.00
IUUC-Tsy-119435	Tarsius syrichta	83.09	3.00e-175	607.00
IUUC-Tni-120311	Tetraodon nigroviridis	74.04	3.00e-159	554.00
IUUC-Tca-121141	Theobroma cacao	32.17	1.00e-49	190.00
IUUC-Tae-122717	Triticum aestivum	33.25	2.00e-55	209.00
IUUC-Tbe-127623	Tupaia belangeri	60.59	3.00e-104	371.00
IUUC-Ttr-128706	Tursiops truncatus	73.13	7.00e-151	526.00
IUUC-Vvi-130871	Vitis vinifera	33.86	1.00e-48	187.00
IUUC-Xtr-131950	Xenopus tropicalis	88.11	0.00e+00	671.00
IUUC-Xma-133364	Xiphophorus maculatus	85.27	0.00e+00	663.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence