iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-097855

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01098601

Gene Name

TBL3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000006977.2	ENSPPYT00000008225.2	ENSPPYP00000007898.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-56	183.7	519	558
UBD/Beta-Prp	5.80e-98	327.8	413	640

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH  + +c++f +    l+++s Dgtik+W l ++ +lk+
   Q: 519  GHRRGLWCVQFsPMdQVLATASADGTIKLWALQDFSCLKT 558
           8999*******977789*******************9986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls...........tgkcvhtlk....ghedsvlslsfspsgdklvsGshdr 116
           ++++ sgh+  v +v++s+ ++ +lvtgs+D t+k+w+l            +g+++   +     h++++ s+++ p+++ l++Gs+dr
   Q: 413  CVAQGSGHTHSVGTVCCSRLKEsFLVTGSQDCTVKLWPLPkallskntapdNGPILLQARttqrCHDKDINSVAIAPNDKLLATGSQDR 501
           577789***********998778**************5555666666667788887766656669************************ PP
   S: 117  tirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvk 205
           t+++w l++ q l  ++sgh++  +cv+++p +++l+++s+D+t++lW l+  ++l+t++g h+ sv +++f s g++l+s + dg vk
   Q: 502  TAKLWALPQCQLLG-VFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEG-HDASVLKVAFVSRGTQLLSSGSDGLVK 588
           *************9.*********************************************9.*************************** PP
   S: 206  lwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdl 256
           lw ++++ecvrtl +h+d v+ ++ s+ d++ ++g+sD  + +W d++  + 
   Q: 589  LWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWkDVTEAEQ 640
           ********************************************87766554 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAETATGVGR FKANYAVEHK IEPFYKGGKA QLDQTGQHLF CVCGTRVNIL EVASGTVLRS 60
LEQEDQESIT AFDLSPDDEV LVTASRALLL AQWAWQEGSV TRLWKAIHTA PVATMAFDPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGAGA CCGCGACCGG AGTGGGCCGC TTCAAGGCCA AGTGAGCCCG GAGCGCTGGG 60
GCCGCGCGGG GAGGGAGCTG GGTTTGCAGC CGGCATAGCG GAGGTGCGCG TGGAGCGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0003723--F:RNA binding
GO:0006364--P:rRNA processing

KEGG

pon:100439289

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	35.38	9.00e-144	504.00
IUUC-Aml-002376	Ailuropoda melanoleuca	88.16	0.00e+00	1386.00
IUUC-Atr-002486	Amborella trichopoda	38.15	3.00e-160	558.00
IUUC-Apl-003519	Anas platyrhynchos	60.74	0.00e+00	892.00
IUUC-Aca-004363	Anolis carolinensis	55.99	1.00e-147	515.00
IUUC-Aly-006152	Arabidopsis lyrata	35.21	3.00e-149	522.00
IUUC-Ath-006966	Arabidopsis thaliana	35.15	3.00e-148	519.00
IUUC-Ago-007746	Ashbya gossypii	30.04	2.00e-104	373.00
IUUC-Acl-008009	Aspergillus clavatus	29.69	3.00e-104	373.00
IUUC-Afl-008681	Aspergillus flavus	28.71	4.00e-94	339.00
IUUC-Afu-008798	Aspergillus fumigatus	29.36	8.00e-92	332.00
IUUC-Ani-009278	Aspergillus nidulans	27.78	3.00e-96	346.00
IUUC-Ang-009640	Aspergillus niger	29.15	5.00e-101	362.00
IUUC-Aor-010160	Aspergillus oryzae	28.71	9.00e-94	338.00
IUUC-Ate-010320	Aspergillus terreus	29.46	1.00e-103	370.00
IUUC-Ame-010930	Astyanax mexicanus	60.20	3.00e-74	270.00
IUUC-Bgr-012054	Blumeria graminis	28.65	1.00e-103	370.00
IUUC-Bta-012611	Bos taurus	89.73	0.00e+00	1398.00
IUUC-Bci-013797	Botrytis cinerea	30.32	8.00e-112	398.00
IUUC-Bdi-014384	Brachypodium distachyon	37.86	3.00e-161	562.00
IUUC-Bol-016483	Brassica oleracea	35.63	2.00e-149	523.00
IUUC-Bra-017798	Brassica rapa	36.24	1.00e-148	520.00
IUUC-Cel-018664	Caenorhabditis elegans	31.09	2.00e-118	420.00
IUUC-Cja-019092	Callithrix jacchus	94.42	0.00e+00	1527.00
IUUC-Cfa-021040	Canis familiaris	88.44	0.00e+00	1396.00
IUUC-Cpo-022529	Cavia porcellus	89.34	0.00e+00	1407.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	59.54	2.00e-46	177.00
IUUC-Csa-024205	Chlorocebus sabaeus	96.29	0.00e+00	1561.00
IUUC-Cin-025560	Ciona intestinalis	45.13	0.00e+00	717.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	30.42	1.00e-112	400.00
IUUC-Cne-027082	Cryptococcus neoformans	30.47	5.00e-114	405.00
IUUC-Cme-027159	Cyanidioschyzon merolae	24.96	8.00e-31	129.00
IUUC-Dre-028138	Danio rerio	53.00	0.00e+00	882.00
IUUC-Dno-029914	Dasypus novemcinctus	66.20	0.00e+00	820.00
IUUC-Dor-030685	Dipodomys ordii	77.39	0.00e+00	931.00
IUUC-Dse-031429	Dothistroma septosporum	29.30	5.00e-98	352.00
IUUC-Dme-031995	Drosophila melanogaster	31.85	1.00e-118	420.00
IUUC-Ete-033086	Echinops telfairi	89.95	0.00e+00	793.00
IUUC-Eca-034354	Equus caballus	91.41	0.00e+00	1410.00
IUUC-Eeu-034832	Erinaceus europaeus	87.47	0.00e+00	825.00
IUUC-Fca-036136	Felis catus	83.33	0.00e+00	1312.00
IUUC-Fal-036859	Ficedula albicollis	64.94	0.00e+00	1038.00
IUUC-Fox-037863	Fusarium oxysporum	30.68	6.00e-101	362.00
IUUC-Fso-038389	Fusarium solani	30.58	2.00e-112	400.00
IUUC-Gmo-038711	Gadus morhua	57.55	0.00e+00	903.00
IUUC-Ggr-039820	Gaeumannomyces graminis	28.48	5.00e-101	362.00
IUUC-Gga-040263	Gallus gallus	64.67	0.00e+00	1073.00
IUUC-Gac-041291	Gasterosteus aculeatus	60.32	0.00e+00	1016.00
IUUC-Gma-044026	Glycine max	38.79	6.00e-166	578.00
IUUC-Ggo-044693	Gorilla gorilla	97.40	0.00e+00	1541.00
IUUC-Hsa-046048	Homo sapiens	97.52	0.00e+00	1544.00
IUUC-Hvu-047608	Hordeum vulgare	37.13	7.00e-160	557.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	90.09	0.00e+00	1477.00
IUUC-Kpa-049209	Komagataella pastoris	32.91	4.00e-121	428.00
IUUC-Lch-050085	Latimeria chalumnae	62.05	0.00e+00	993.00
IUUC-Lpe-050945	Leersia perrieri	37.99	4.00e-157	548.00
IUUC-Loc-052679	Lepisosteus oculatus	64.71	0.00e+00	1085.00
IUUC-Laf-053685	Loxodonta africana	87.96	0.00e+00	1345.00
IUUC-Mcc-055861	Macaca mulatta	96.53	0.00e+00	1532.00
IUUC-Meu-056820	Macropus eugenii	70.11	0.00e+00	958.00
IUUC-Mor-057234	Magnaporthe oryzae	28.08	5.00e-101	362.00
IUUC-Mpo-057456	Magnaporthe poae	29.67	9.00e-83	301.00
IUUC-Mtr-058122	Medicago truncatula	39.17	4.00e-167	582.00
IUUC-Mla-058980	Melampsora laricipopulina	28.34	5.00e-96	345.00
IUUC-Mga-060080	Meleagris gallopavo	62.64	0.00e+00	1066.00
IUUC-Mvi-060338	Microbotryum violaceum	34.76	8.00e-142	498.00
IUUC-Mmr-060762	Microcebus murinus	92.57	0.00e+00	1455.00
IUUC-Mdo-061975	Monodelphis domestica	73.53	0.00e+00	1155.00
IUUC-Mmu-064038	Mus musculus	89.11	0.00e+00	1404.00
IUUC-Mac-065189	Musa acuminata	36.73	4.00e-159	555.00
IUUC-Mpu-066526	Mustela putorius furo	88.47	0.00e+00	1380.00
IUUC-Mlu-067716	Myotis lucifugus	89.36	0.00e+00	1479.00
IUUC-Nfi-068474	Neosartorya fischeri	29.81	3.00e-95	343.00
IUUC-Ncr-068826	Neurospora crassa	28.16	3.00e-95	343.00
IUUC-Nle-069832	Nomascus leucogenys	96.91	0.00e+00	1570.00
IUUC-Opr-071183	Ochotona princeps	82.81	0.00e+00	1303.00
IUUC-Ont-072371	Oreochromis niloticus	61.39	0.00e+00	1018.00
IUUC-Oan-073491	Ornithorhynchus anatinus	65.71	0.00e+00	934.00
IUUC-Oba-075963	Oryza barthii	37.38	2.00e-158	553.00
IUUC-Obr-076173	Oryza brachyantha	38.64	4.00e-160	558.00
IUUC-Ogl-077692	Oryza glaberrima	37.38	1.00e-158	553.00
IUUC-Ogu-078965	Oryza glumaepatula	37.38	2.00e-158	553.00
IUUC-Oin-079708	Oryza indica	37.38	6.00e-159	555.00
IUUC-Olo-080679	Oryza longistaminata	37.06	3.00e-156	545.00
IUUC-Oni-082960	Oryza nivara	37.26	1.00e-158	553.00
IUUC-Opu-083282	Oryza punctata	37.20	1.00e-151	530.00
IUUC-Oru-085224	Oryza rufipogon	37.38	9.00e-159	554.00
IUUC-Osa-085320	Oryza sativa	37.38	9.00e-159	554.00
IUUC-Ola-086370	Oryzias latipes	57.74	2.00e-131	462.00
IUUC-Olu-087814	Ostreococcus lucimarinus	32.67	7.00e-101	362.00
IUUC-Oga-088458	Otolemur garnettii	88.28	0.00e+00	1485.00
IUUC-Oar-090032	Ovis aries	80.85	0.00e+00	986.00
IUUC-Ptr-090749	Pan troglodytes	96.53	0.00e+00	1522.00
IUUC-Pan-091691	Papio anubis	93.07	0.00e+00	1464.00
IUUC-Psi-093200	Pelodiscus sinensis	64.32	0.00e+00	1055.00
IUUC-Pma-094165	Petromyzon marinus	52.98	0.00e+00	650.00
IUUC-Pno-095048	Phaeosphaeria nodorum	31.66	2.00e-88	320.00
IUUC-Ppa-095336	Physcomitrella patens	39.04	2.00e-158	553.00
IUUC-Pfo-096132	Poecilia formosa	61.40	0.00e+00	988.00
IUUC-Pop-099434	Populus trichocarpa	36.29	1.00e-151	530.00
IUUC-Pca-100232	Procavia capensis	84.50	1.00e-164	573.00
IUUC-Ppe-101665	Prunus persica	36.45	3.00e-159	555.00
IUUC-Pva-102178	Pteropus vampyrus	89.96	0.00e+00	1424.00
IUUC-Pgr-103288	Puccinia graminis	31.08	2.00e-84	307.00
IUUC-Ptt-103808	Puccinia triticina	31.72	5.00e-86	312.00
IUUC-Pte-104205	Pyrenophora teres	30.26	4.00e-105	375.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	29.65	4.00e-95	342.00
IUUC-Rno-105617	Rattus norvegicus	89.23	0.00e+00	1403.00
IUUC-Sce-106281	Saccharomyces cerevisiae	30.06	2.00e-107	383.00
IUUC-Sha-107378	Sarcophilus harrisii	73.70	0.00e+00	1137.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.22	7.00e-122	431.00
IUUC-Spo-108361	Schizosaccharomyces pombe	33.54	3.00e-119	422.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	30.74	3.00e-114	406.00
IUUC-Smo-109257	Selaginella moellendorffii	39.60	6.00e-159	554.00
IUUC-Sit-110258	Setaria italica	36.55	4.00e-161	561.00
IUUC-Sly-111521	Solanum lycopersicum	36.52	4.00e-154	538.00
IUUC-Stu-112718	Solanum tuberosum	46.43	8.00e-34	135.00
IUUC-Sar-113586	Sorex araneus	76.84	3.00e-64	239.00
IUUC-Sbi-114768	Sorghum bicolor	37.93	2.00e-164	573.00
IUUC-Sre-115159	Sporisorium reilianum	33.58	6.00e-97	348.00
IUUC-Ssc-116342	Sus scrofa	67.72	0.00e+00	927.00
IUUC-Tgu-117320	Taeniopygia guttata	63.55	0.00e+00	1002.00
IUUC-Tru-118024	Takifugu rubripes	60.35	0.00e+00	976.00
IUUC-Tni-119971	Tetraodon nigroviridis	61.29	0.00e+00	988.00
IUUC-Tca-121248	Theobroma cacao	37.59	8.00e-159	554.00
IUUC-Tre-122079	Trichoderma reesei	30.67	9.00e-104	371.00
IUUC-Tvi-122554	Trichoderma virens	30.27	3.00e-103	369.00
IUUC-Tae-125865	Triticum aestivum	37.48	1.00e-158	553.00
IUUC-Tur-126436	Triticum urartu	36.69	1.00e-131	463.00
IUUC-Tme-126942	Tuber melanosporum	31.10	3.00e-109	389.00
IUUC-Tbe-128000	Tupaia belangeri	92.55	1.00e-86	314.00
IUUC-Ttr-128964	Tursiops truncatus	87.83	0.00e+00	1404.00
IUUC-Uma-129473	Ustilago maydis	32.45	5.00e-105	375.00
IUUC-Vda-129749	Verticillium dahliae	30.26	1.00e-96	347.00
IUUC-Vvi-131511	Vitis vinifera	39.15	5.00e-161	561.00
IUUC-Xtr-132816	Xenopus tropicalis	55.08	0.00e+00	882.00
IUUC-Xma-133672	Xiphophorus maculatus	61.78	0.00e+00	1023.00
IUUC-Yli-134602	Yarrowia lipolytica	34.98	2.00e-136	479.00
IUUC-Zma-135559	Zea mays	36.55	3.00e-155	542.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence