iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131103

Ensembl Protein ID

VIT_02s0025g01250.t01

UniProt Accession

D7TVD9; D7TVD9_VITVI

Genbank Protein ID

CBI34464.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596251

Gene Name

SEH1H; VIT_02s0025g01250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_02s0025g01250	VIT_02s0025g01250.t01	VIT_02s0025g01250.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-13	49.2	278	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH ++v+ +++  s+ +l++ ++Dg +++W 
   Q: 278  GHDGEVWQMEWdmSGMTLATTGGDGMVRLWQ 308
           8**********8877669************5 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEKSLVTLDN GTTCSSWNYN GERLATGSVD GTLAIFDSID PASSSFTCTS RSRVHEDSVV 60
KVVWVPPEYG DAVGCICADG TLSLWEEVVE DAQPLQWKLC KSFGSNSNKV LDVQFGVSPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGGCAGA GGTTGAGGTT CAGAGAAAAT GGAGAAATCT CTGGTGACAC TCGACAACGG 60
CACCACATGC TCTTCCTGGA ACTACAATGG CGAGAGATTG GCAACGGGCT CAGTCGATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	72.64	2.00e-88	317.00
IUUC-Apl-003654	Anas platyrhynchos	27.86	6.00e-27	114.00
IUUC-Aca-004378	Anolis carolinensis	27.53	5.00e-27	114.00
IUUC-Aly-005963	Arabidopsis lyrata	69.14	9.00e-131	458.00
IUUC-Ath-007107	Arabidopsis thaliana	69.14	2.00e-133	467.00
IUUC-Bdi-014594	Brachypodium distachyon	61.99	5.00e-120	422.00
IUUC-Bol-016565	Brassica oleracea	69.44	2.00e-129	454.00
IUUC-Bra-017831	Brassica rapa	69.97	4.00e-130	456.00
IUUC-Cho-024660	Choloepus hoffmanni	26.24	8.00e-26	110.00
IUUC-Eca-033425	Equus caballus	25.78	5.00e-26	110.00
IUUC-Fal-037234	Ficedula albicollis	27.86	4.00e-26	114.00
IUUC-Gma-044300	Glycine max	76.38	4.00e-145	506.00
IUUC-Hvu-047455	Hordeum vulgare	60.75	5.00e-117	412.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	26.24	2.00e-26	111.00
IUUC-Kpa-049201	Komagataella pastoris	23.57	2.00e-25	108.00
IUUC-Lpe-051064	Leersia perrieri	61.99	8.00e-120	422.00
IUUC-Mtr-057876	Medicago truncatula	72.26	5.00e-143	499.00
IUUC-Mla-058820	Melampsora laricipopulina	23.63	1.00e-16	79.70
IUUC-Mga-059348	Meleagris gallopavo	27.86	3.00e-27	115.00
IUUC-Mmu-064328	Mus musculus	28.53	2.00e-35	142.00
IUUC-Mac-064960	Musa acuminata	65.43	7.00e-117	412.00
IUUC-Nle-068977	Nomascus leucogenys	26.14	1.00e-27	115.00
IUUC-Oan-073098	Ornithorhynchus anatinus	27.02	9.00e-27	113.00
IUUC-Oba-075325	Oryza barthii	57.94	1.00e-107	381.00
IUUC-Obr-076089	Oryza brachyantha	60.75	3.00e-117	414.00
IUUC-Ogl-077279	Oryza glaberrima	61.37	1.00e-117	414.00
IUUC-Ogu-078901	Oryza glumaepatula	57.94	2.00e-107	380.00
IUUC-Oin-079385	Oryza indica	58.82	9.00e-117	412.00
IUUC-Ome-081809	Oryza meridionalis	66.67	2.00e-111	395.00
IUUC-Oni-082185	Oryza nivara	56.07	2.00e-102	364.00
IUUC-Opu-083324	Oryza punctata	59.19	5.00e-112	396.00
IUUC-Oru-084801	Oryza rufipogon	61.68	2.00e-118	417.00
IUUC-Osa-085790	Oryza sativa	61.37	1.00e-117	414.00
IUUC-Oar-090298	Ovis aries	26.60	2.00e-24	108.00
IUUC-Psi-093508	Pelodiscus sinensis	27.18	2.00e-26	112.00
IUUC-Ppa-095228	Physcomitrella patens	43.23	1.00e-70	258.00
IUUC-Pop-099015	Populus trichocarpa	76.31	5.00e-150	522.00
IUUC-Ppe-101303	Prunus persica	81.29	1.00e-156	544.00
IUUC-Rno-104895	Rattus norvegicus	27.96	7.00e-30	126.00
IUUC-Sha-106829	Sarcophilus harrisii	26.79	1.00e-26	113.00
IUUC-Smo-109282	Selaginella moellendorffii	41.61	3.00e-71	261.00
IUUC-Sit-110393	Setaria italica	62.31	1.00e-119	421.00
IUUC-Sly-111125	Solanum lycopersicum	73.85	2.00e-141	494.00
IUUC-Stu-112745	Solanum tuberosum	66.67	2.00e-141	494.00
IUUC-Sar-113279	Sorex araneus	25.78	7.00e-26	110.00
IUUC-Sbi-114110	Sorghum bicolor	61.99	9.00e-120	422.00
IUUC-Ssc-115589	Sus scrofa	25.80	2.00e-25	108.00
IUUC-Tru-117985	Takifugu rubripes	25.08	5.00e-24	107.00
IUUC-Tca-120999	Theobroma cacao	67.58	1.00e-133	469.00
IUUC-Tae-122796	Triticum aestivum	60.75	3.00e-118	417.00
IUUC-Tur-126582	Triticum urartu	63.08	9.00e-107	379.00
IUUC-Tbe-127344	Tupaia belangeri	24.53	1.00e-15	76.60
IUUC-Ttr-128347	Tursiops truncatus	26.24	4.00e-26	111.00
IUUC-Vpa-130656	Vicugna pacos	26.48	3.00e-26	111.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence