iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-132478

Ensembl Protein ID

ENSXETP00000058181.2

UniProt Accession

F7C7E4; F7C7E4_XENTR

Genbank Protein ID

ENSXETP00000058181

Protein Name

Spermidine synthase

Genbank Nucleotide ID

AAMC01092484

Gene Name

srm

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000028025.2	ENSXETT00000058181.2	ENSXETP00000058181.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	30.77	2.00e-03	30.00	IUUC-Ots-000041

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MEKPVQDGWF RETCSLWPGQ AMSLEVEEVL YHKQSSFQEI LVFRSKTYGN VLVLDGLIQC 60
TERDEFSYQE MIANLPLYSH PNPRKVLIIG GGDGGVLREV VKHPSVESVV QCEIDEEVIN 120

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Nucleotide Sequence
(Fasta)

ATGGAGAAGC CGGTCCAGGA TGGCTGGTTC CGGGAGACCT GCAGTTTGTG GCCCGGTCAG 60
GCCATGTCAC TCGAAGTGGA AGAGGTGCTT TATCATAAAC AGTCCTCGTT TCAGGAGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0620--Polyamine biosynthesis
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR030374--PABS
IPR030373--PABS_CS
IPR029063--SAM-dependent_MTases
IPR001045--Spermi_synthase
IPR030668--Spermi_synthase_euk

PROSITE

PS01330--PABS_1
PS51006--PABS_2

Gene Ontology

GO:0004766--F:spermidine synthase activity
GO:0008295--P:spermidine biosynthetic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025303	Ciona intestinalis	67.03	2.00e-112	397.00
IUUC-Csv-025917	Ciona savignyi	64.26	4.00e-107	380.00
IUUC-Dre-028585	Danio rerio	81.91	4.00e-135	473.00
IUUC-Gmo-039381	Gadus morhua	82.56	6.00e-136	476.00
IUUC-Gac-041821	Gasterosteus aculeatus	79.00	7.00e-121	426.00
IUUC-Hsa-046850	Homo sapiens	94.51	6.00e-42	162.00
IUUC-Nle-069521	Nomascus leucogenys	88.48	7.00e-125	439.00
IUUC-Ola-086442	Oryzias latipes	81.21	2.00e-131	461.00
IUUC-Pab-098295	Pongo abelii	33.33	2.50e+00	25.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence