iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121459

Ensembl Protein ID

EOX95004

UniProt Accession

A0A061DQB1; A0A061DQB1_THECC

Genbank Protein ID

EOX95004.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_004587

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_004587	EOX95004	EOX95004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-08	34.8	244	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtgvllk 37
           H +++ c+a+ +d  ll+++s  gt ++++++ +g+ll+
   Q: 244  HDSRIACFALaQDgQLLATASTKGTlVRIFNTVDGTLLQ 282
           99*********888*********************9987 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MATLSAYPSP NPNPNFLSST DQTNQESLPQ IQHHASPDGD PNATPTPNSN PNFHTPLSTP 60
PEAISPAAPQ PSLLHLSFNQ DHGCFASGID QGFRIYNCDP FREIFRRDFD RGGGGGIGVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGCATAGA AGGATTTATT GTTTAGTGAT GTAATTGGAG TTTCTTTTCC TTGATTGATG 60
AGGCAATAAA GATTTATTCT TATGAAAAAA AAAAAAGAAA TCCTATTTTG AGGTAAACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0006914--P:autophagy
GO:0050832--P:defense response to fungus
GO:0010150--P:leaf senescence
GO:0010508--P:positive regulation of autophagy
GO:0006979--P:response to oxidative stress
GO:0009651--P:response to salt stress
GO:0042594--P:response to starvation
GO:0009414--P:response to water deprivation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001504	Ailuropoda melanoleuca	45.25	3.00e-63	234.00
IUUC-Apl-003741	Anas platyrhynchos	43.97	1.00e-57	215.00
IUUC-Aca-004629	Anolis carolinensis	43.99	3.00e-61	227.00
IUUC-Aly-006357	Arabidopsis lyrata	81.56	1.00e-158	551.00
IUUC-Ath-006629	Arabidopsis thaliana	81.89	5.00e-157	546.00
IUUC-Ago-007768	Ashbya gossypii	24.82	3.00e-24	105.00
IUUC-Ame-011233	Astyanax mexicanus	43.72	4.00e-62	230.00
IUUC-Bta-012842	Bos taurus	44.69	3.00e-63	234.00
IUUC-Bdi-014719	Brachypodium distachyon	73.83	7.00e-144	503.00
IUUC-Bol-015119	Brassica oleracea	81.94	1.00e-162	565.00
IUUC-Bra-017319	Brassica rapa	82.42	9.00e-160	555.00
IUUC-Cja-018855	Callithrix jacchus	43.86	3.00e-55	207.00
IUUC-Cfa-020539	Canis familiaris	43.86	3.00e-55	207.00
IUUC-Cpo-021981	Cavia porcellus	45.25	2.00e-63	234.00
IUUC-Cre-022613	Chlamydomonas reinhardtii	32.34	1.00e-30	127.00
IUUC-Csa-023140	Chlorocebus sabaeus	45.25	2.00e-63	234.00
IUUC-Cho-024328	Choloepus hoffmanni	32.37	8.00e-32	130.00
IUUC-Cin-025655	Ciona intestinalis	43.85	3.00e-59	221.00
IUUC-Csv-025977	Ciona savignyi	40.92	3.00e-62	231.00
IUUC-Cne-026947	Cryptococcus neoformans	29.81	9.00e-42	163.00
IUUC-Dre-028091	Danio rerio	43.72	3.00e-62	231.00
IUUC-Dno-029987	Dasypus novemcinctus	45.94	6.00e-64	236.00
IUUC-Dor-030931	Dipodomys ordii	35.66	2.00e-50	191.00
IUUC-Dse-031215	Dothistroma septosporum	29.23	1.00e-30	126.00
IUUC-Dme-031881	Drosophila melanogaster	42.23	5.00e-59	220.00
IUUC-Ete-032303	Echinops telfairi	35.60	1.00e-44	172.00
IUUC-Eca-033323	Equus caballus	44.54	1.00e-58	219.00
IUUC-Eeu-034479	Erinaceus europaeus	38.67	2.00e-31	128.00
IUUC-Fca-035675	Felis catus	44.54	9.00e-59	219.00
IUUC-Fal-037218	Ficedula albicollis	44.54	2.00e-62	232.00
IUUC-Fox-037797	Fusarium oxysporum	33.77	2.00e-36	145.00
IUUC-Gmo-038583	Gadus morhua	35.44	2.00e-53	202.00
IUUC-Ggr-039909	Gaeumannomyces graminis	39.49	4.00e-44	171.00
IUUC-Gga-040977	Gallus gallus	44.54	7.00e-63	233.00
IUUC-Gac-042096	Gasterosteus aculeatus	43.17	5.00e-67	247.00
IUUC-Gma-043639	Glycine max	75.45	2.00e-156	544.00
IUUC-Ggo-045466	Gorilla gorilla	33.61	1.00e-40	159.00
IUUC-Hsa-046532	Homo sapiens	45.25	2.00e-63	234.00
IUUC-Hvu-047374	Hordeum vulgare	71.24	9.00e-141	492.00
IUUC-Itr-048277	Ictidomys tridecemlineatus	45.25	2.00e-63	234.00
IUUC-Kpa-049378	Komagataella pastoris	30.82	3.00e-37	148.00
IUUC-Lch-049800	Latimeria chalumnae	44.26	3.00e-64	237.00
IUUC-Lpe-051251	Leersia perrieri	72.77	9.00e-145	505.00
IUUC-Loc-052379	Lepisosteus oculatus	43.68	1.00e-57	216.00
IUUC-Lma-053076	Leptosphaeria maculans	33.24	7.00e-42	163.00
IUUC-Laf-054084	Loxodonta africana	43.59	5.00e-60	223.00
IUUC-Mcc-055304	Macaca mulatta	43.86	3.00e-55	207.00
IUUC-Meu-056020	Macropus eugenii	39.76	3.00e-38	151.00
IUUC-Mpo-057416	Magnaporthe poae	39.42	8.00e-44	170.00
IUUC-Mtr-057850	Medicago truncatula	77.69	2.00e-152	530.00
IUUC-Mla-058885	Melampsora laricipopulina	32.81	2.00e-34	138.00
IUUC-Mga-060051	Meleagris gallopavo	43.30	2.00e-58	218.00
IUUC-Mvi-060462	Microbotryum violaceum	37.09	4.00e-46	178.00
IUUC-Mmr-061076	Microcebus murinus	41.46	3.00e-56	211.00
IUUC-Mdo-062465	Monodelphis domestica	44.26	4.00e-62	230.00
IUUC-Mmu-063289	Mus musculus	45.91	3.00e-62	231.00
IUUC-Mac-064713	Musa acuminata	79.94	5.00e-135	472.00
IUUC-Mpu-066052	Mustela putorius furo	44.35	6.00e-59	220.00
IUUC-Mlu-067972	Myotis lucifugus	45.25	1.00e-63	235.00
IUUC-Nfi-068596	Neosartorya fischeri	39.08	1.00e-42	166.00
IUUC-Ncr-068833	Neurospora crassa	29.03	3.00e-34	138.00
IUUC-Nle-069047	Nomascus leucogenys	45.99	1.00e-61	229.00
IUUC-Opr-070933	Ochotona princeps	33.20	2.00e-24	105.00
IUUC-Ont-071875	Oreochromis niloticus	43.72	1.00e-68	252.00
IUUC-Oan-073084	Ornithorhynchus anatinus	32.48	7.00e-33	134.00
IUUC-Ocu-074736	Oryctolagus cuniculus	40.79	5.00e-50	190.00
IUUC-Oba-075529	Oryza barthii	71.20	4.00e-139	488.00
IUUC-Obr-076316	Oryza brachyantha	74.92	1.00e-125	441.00
IUUC-Ogl-077403	Oryza glaberrima	72.19	2.00e-143	501.00
IUUC-Ogu-078223	Oryza glumaepatula	72.19	3.00e-143	500.00
IUUC-Oin-079580	Oryza indica	72.19	2.00e-143	501.00
IUUC-Olo-080794	Oryza longistaminata	70.26	1.00e-142	499.00
IUUC-Ome-081736	Oryza meridionalis	72.10	5.00e-140	490.00
IUUC-Oni-082413	Oryza nivara	72.19	3.00e-143	500.00
IUUC-Opu-083356	Oryza punctata	72.51	4.00e-144	503.00
IUUC-Oru-084972	Oryza rufipogon	72.19	2.00e-143	501.00
IUUC-Osa-085644	Oryza sativa	72.19	2.00e-143	501.00
IUUC-Ola-086628	Oryzias latipes	43.44	4.00e-69	253.00
IUUC-Olu-087808	Ostreococcus lucimarinus	49.86	1.00e-92	332.00
IUUC-Oga-088642	Otolemur garnettii	45.25	2.00e-63	234.00
IUUC-Oar-089538	Ovis aries	43.75	1.00e-58	219.00
IUUC-Ptr-091326	Pan troglodytes	45.25	2.00e-63	234.00
IUUC-Pan-091795	Papio anubis	45.25	2.00e-63	234.00
IUUC-Psi-093258	Pelodiscus sinensis	43.97	2.00e-57	215.00
IUUC-Pma-094403	Petromyzon marinus	36.16	2.00e-53	202.00
IUUC-Pno-094851	Phaeosphaeria nodorum	31.18	6.00e-39	154.00
IUUC-Ppa-095480	Physcomitrella patens	59.00	1.00e-121	429.00
IUUC-Pfo-096099	Poecilia formosa	43.72	1.00e-68	252.00
IUUC-Pab-098681	Pongo abelii	45.25	2.00e-63	234.00
IUUC-Pop-099760	Populus trichocarpa	85.21	0.00e+00	631.00
IUUC-Ppe-101963	Prunus persica	79.80	7.00e-166	575.00
IUUC-Pva-103006	Pteropus vampyrus	44.38	4.00e-58	217.00
IUUC-Pgr-103258	Puccinia graminis	34.02	3.00e-37	149.00
IUUC-Ptt-103915	Puccinia triticina	32.13	2.00e-34	139.00
IUUC-Pte-104115	Pyrenophora teres	30.68	2.00e-37	148.00
IUUC-Pyt-104738	Pyrenophora triticirepentis	30.40	2.00e-34	139.00
IUUC-Rno-106112	Rattus norvegicus	45.91	3.00e-62	231.00
IUUC-Sha-107573	Sarcophilus harrisii	44.26	5.00e-62	230.00
IUUC-Sja-107791	Schizosaccharomyces japonicus	31.06	7.00e-38	150.00
IUUC-Spo-108254	Schizosaccharomyces pombe	33.81	3.00e-38	151.00
IUUC-Sit-110655	Setaria italica	75.34	4.00e-147	513.00
IUUC-Sly-110866	Solanum lycopersicum	59.08	1.00e-136	478.00
IUUC-Stu-111954	Solanum tuberosum	73.74	3.00e-158	550.00
IUUC-Sar-113276	Sorex araneus	39.21	2.00e-28	118.00
IUUC-Sbi-114057	Sorghum bicolor	71.97	5.00e-144	503.00
IUUC-Sre-115219	Sporisorium reilianum	32.67	1.00e-33	136.00
IUUC-Ssc-116163	Sus scrofa	44.97	6.00e-63	233.00
IUUC-Tgu-116488	Taeniopygia guttata	43.68	4.00e-57	214.00
IUUC-Tru-118329	Takifugu rubripes	43.99	8.00e-77	279.00
IUUC-Tni-119729	Tetraodon nigroviridis	41.69	1.00e-70	259.00
IUUC-Tae-124634	Triticum aestivum	68.81	4.00e-141	493.00
IUUC-Ttr-128940	Tursiops truncatus	43.73	4.00e-50	190.00
IUUC-Vvi-131293	Vitis vinifera	79.27	1.00e-167	581.00
IUUC-Xtr-131806	Xenopus tropicalis	45.08	4.00e-65	240.00
IUUC-Xma-134275	Xiphophorus maculatus	43.72	1.00e-68	252.00
IUUC-Yli-134566	Yarrowia lipolytica	36.29	1.00e-47	182.00
IUUC-Zma-135090	Zea mays	71.90	3.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence