iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	miRNAMap	RAID2
Post-translational Modifications (PTMs)
BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UIM	1.00e-08	34.6	183	201
UBD/Alpha-Helix/UIM	0.00014	12.9	208	226

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           +E+++LqlAla+S++E+++
   Q: 183  EEELQLQLALAMSKEEADQ 201
           79**************987 PP

UBD/Alpha-Helix/UIM

   S: 1    dEdeeLqlAlalSlqEeee 19
           ++d +LqlAl lS++E+++
   Q: 208  EDDVQLQLALSLSREEHDK 226
           699*************985 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSTSSLRRQM KNIVHNYSEA EIKVREATSN DPWGPSSSLM SEIADLTYNV VAFSEIMSMI 60
WKRLNDHGKN WRHVYKAMTL MEYLIKTGSE RVSQQCKENM YAVQTLKDFQ YVDRDGKDQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCCCTCCG TGCGTCTGTG CGTGCGCACG TGCGCACTTC TGCATCCCGC AGCCCGGCGC 60
GCGCCCGGCG ACACCGAGGC CGAGCGGGGG CAGGGGTCTG ACCGTCATGA CCCCCGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR013809--ENTH
IPR008942--ENTH_VHS
IPR003903--UIM_dom

PROSITE

PS50942--ENTH
PS50330--UIM

Pfam

PF01417--ENTH
PF02809--UIM

SMART

SM00273--ENTH
SM00726--UIM

Gene Ontology

GO:0005829--C:cytosol
GO:0048568--P:embryonic organ development
GO:0007565--P:female pregnancy
GO:0001701--P:in utero embryonic development
GO:0007219--P:Notch signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002304	Ailuropoda melanoleuca	93.45	0.00e+00	764.00
IUUC-Atr-002956	Amborella trichopoda	47.65	2.00e-41	164.00
IUUC-Aca-005208	Anolis carolinensis	65.00	2.00e-165	575.00
IUUC-Ame-011460	Astyanax mexicanus	78.36	6.00e-101	361.00
IUUC-Bta-013352	Bos taurus	92.53	0.00e+00	707.00
IUUC-Cfa-020367	Canis familiaris	93.58	0.00e+00	757.00
IUUC-Csa-023208	Chlorocebus sabaeus	94.27	0.00e+00	747.00
IUUC-Dre-028015	Danio rerio	75.18	8.00e-104	371.00
IUUC-Dno-029947	Dasypus novemcinctus	91.11	4.00e-173	601.00
IUUC-Dor-030137	Dipodomys ordii	100.00	4.00e-120	425.00
IUUC-Eca-034189	Equus caballus	94.62	0.00e+00	783.00
IUUC-Fca-036270	Felis catus	93.40	0.00e+00	780.00
IUUC-Fso-038083	Fusarium solani	40.43	5.00e-41	162.00
IUUC-Gac-042085	Gasterosteus aculeatus	76.12	3.00e-97	348.00
IUUC-Hsa-046033	Homo sapiens	94.62	0.00e+00	731.00
IUUC-Itr-048041	Ictidomys tridecemlineatus	94.97	0.00e+00	775.00
IUUC-Kpa-049233	Komagataella pastoris	37.55	1.00e-35	144.00
IUUC-Laf-054571	Loxodonta africana	94.62	0.00e+00	759.00
IUUC-Mcc-055036	Macaca mulatta	94.79	0.00e+00	729.00
IUUC-Meu-056308	Macropus eugenii	82.72	2.00e-100	359.00
IUUC-Mtr-058328	Medicago truncatula	49.66	6.00e-43	169.00
IUUC-Mmr-060634	Microcebus murinus	93.40	0.00e+00	783.00
IUUC-Mmu-063799	Mus musculus	99.13	0.00e+00	778.00
IUUC-Mac-064643	Musa acuminata	50.00	3.00e-43	170.00
IUUC-Mpu-066803	Mustela putorius furo	92.88	0.00e+00	776.00
IUUC-Mlu-067895	Myotis lucifugus	81.63	2.00e-96	346.00
IUUC-Nle-069810	Nomascus leucogenys	94.40	0.00e+00	707.00
IUUC-Opr-071138	Ochotona princeps	85.68	3.00e-124	439.00
IUUC-Ont-071888	Oreochromis niloticus	51.26	2.00e-108	386.00
IUUC-Ola-087447	Oryzias latipes	54.70	1.00e-108	387.00
IUUC-Oga-088369	Otolemur garnettii	92.53	0.00e+00	793.00
IUUC-Oar-090071	Ovis aries	84.28	8.00e-148	516.00
IUUC-Ptr-091336	Pan troglodytes	90.10	0.00e+00	630.00
IUUC-Pan-091921	Papio anubis	94.62	0.00e+00	727.00
IUUC-Ppa-095284	Physcomitrella patens	48.99	4.00e-44	173.00
IUUC-Pfo-097111	Poecilia formosa	53.28	3.00e-105	375.00
IUUC-Pab-098722	Pongo abelii	94.44	0.00e+00	754.00
IUUC-Pca-100297	Procavia capensis	85.76	0.00e+00	705.00
IUUC-Pva-102305	Pteropus vampyrus	85.40	1.00e-176	612.00
IUUC-Spo-108319	Schizosaccharomyces pombe	51.85	7.00e-41	162.00
IUUC-Smo-109370	Selaginella moellendorffii	49.34	3.00e-40	158.00
IUUC-Ttr-128384	Tursiops truncatus	92.60	0.00e+00	659.00
IUUC-Xtr-131804	Xenopus tropicalis	61.51	5.00e-158	551.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence