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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105239
UUCD1 version UUC-RaN-00674
Ensembl Protein ID ENSRNOP00000005581.5
UniProt Accession F1MAM1; F1MAM1_RAT
Genbank Protein ID ENSRNOP00000005581
Protein Name F-box and WD repeat domain-containing 9
Genbank Nucleotide ID AABR07072634
Gene Name Fbxw9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000004212.5 ENSRNOT00000005581.5 ENSRNOP00000005581.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.00e-23 80.1 224 254
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlr 31
           +H+++v++la +d++++sGs+D t+k+WD+ 
   Q: 224  THKGWVWSLAAQDHRVCSGSWDSTVKLWDMA 254
           5********99789***************86 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MELPSGQCGN PRSCEDESDP EPEPDPDAQA EAYVARVLTP PKPGMTPRRS SLQSMFSASL 60
GMPERKDASK VPAVSLPGLL SLPPELLLEI CAYLDARVVL HVLPCVCQAL HNLVRDRVTW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105239|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTGATCTCGC GCTGCCTAGG AAACAAGACG CGGCCCTGGC CAAACCTGAG ACAGCCGCGC 60
CTACCCCGGC GCCATGGAGC TTCCCTCAGG GCAGTGTGGG AATCCTCGCT CTTGTGAGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105239|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00256--FBOX
SM00320--WD40
KEGG rno:288921
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001913 Ailuropoda melanoleuca 81.22 0.00e+00 714.00
IUUC-Aca-004823 Anolis carolinensis 63.45 2.00e-148 518.00
IUUC-Bta-012687 Bos taurus 84.50 0.00e+00 717.00
IUUC-Cel-018433 Caenorhabditis elegans 26.25 3.00e-30 125.00
IUUC-Cja-018873 Callithrix jacchus 72.07 1.00e-179 622.00
IUUC-Cfa-020350 Canis familiaris 84.06 0.00e+00 710.00
IUUC-Cpo-021990 Cavia porcellus 82.53 0.00e+00 711.00
IUUC-Csa-023590 Chlorocebus sabaeus 75.33 8.00e-175 606.00
IUUC-Dre-028778 Danio rerio 41.51 1.00e-78 287.00
IUUC-Dor-030840 Dipodomys ordii 70.09 4.00e-153 534.00
IUUC-Eca-034232 Equus caballus 78.25 1.00e-165 575.00
IUUC-Fca-036533 Felis catus 86.08 0.00e+00 719.00
IUUC-Gmo-038675 Gadus morhua 44.26 1.00e-78 286.00
IUUC-Gac-041443 Gasterosteus aculeatus 43.37 8.00e-87 313.00
IUUC-Ggo-044439 Gorilla gorilla 73.77 5.00e-178 617.00
IUUC-Hsa-046835 Homo sapiens 71.11 4.00e-167 580.00
IUUC-Itr-048482 Ictidomys tridecemlineatus 84.22 0.00e+00 714.00
IUUC-Lch-049736 Latimeria chalumnae 52.37 2.00e-123 435.00
IUUC-Loc-051918 Lepisosteus oculatus 59.90 2.00e-68 251.00
IUUC-Laf-054045 Loxodonta africana 81.61 4.00e-121 427.00
IUUC-Mcc-054869 Macaca mulatta 75.55 1.00e-176 612.00
IUUC-Meu-056621 Macropus eugenii 76.34 2.00e-164 571.00
IUUC-Mmr-061740 Microcebus murinus 79.79 0.00e+00 672.00
IUUC-Mdo-062012 Monodelphis domestica 66.45 2.00e-169 588.00
IUUC-Mmu-063107 Mus musculus 94.54 0.00e+00 835.00
IUUC-Mpu-065889 Mustela putorius furo 84.31 0.00e+00 718.00
IUUC-Mlu-067453 Myotis lucifugus 83.84 0.00e+00 693.00
IUUC-Nle-070132 Nomascus leucogenys 78.38 0.00e+00 631.00
IUUC-Opr-070719 Ochotona princeps 61.18 2.00e-135 476.00
IUUC-Ont-072613 Oreochromis niloticus 49.19 7.00e-89 320.00
IUUC-Ocu-074377 Oryctolagus cuniculus 61.31 3.00e-131 461.00
IUUC-Ola-087040 Oryzias latipes 41.90 6.00e-69 254.00
IUUC-Oga-089018 Otolemur garnettii 85.71 0.00e+00 740.00
IUUC-Oar-089327 Ovis aries 83.41 0.00e+00 693.00
IUUC-Ptr-090748 Pan troglodytes 78.21 0.00e+00 632.00
IUUC-Pan-091879 Papio anubis 76.82 8.00e-107 379.00
IUUC-Psi-093031 Pelodiscus sinensis 68.28 5.00e-177 613.00
IUUC-Pfo-096738 Poecilia formosa 45.92 3.00e-68 253.00
IUUC-Pab-097958 Pongo abelii 78.17 4.00e-175 607.00
IUUC-Pca-101049 Procavia capensis 71.43 2.00e-170 592.00
IUUC-Pva-102123 Pteropus vampyrus 79.75 0.00e+00 703.00
IUUC-Sha-107531 Sarcophilus harrisii 77.71 8.00e-161 559.00
IUUC-Sar-113257 Sorex araneus 73.15 3.00e-167 581.00
IUUC-Ssc-115236 Sus scrofa 84.06 0.00e+00 715.00
IUUC-Tru-117762 Takifugu rubripes 45.41 1.00e-88 320.00
IUUC-Tni-120085 Tetraodon nigroviridis 44.19 7.00e-82 297.00
IUUC-Ttr-128831 Tursiops truncatus 84.29 2.00e-172 598.00
IUUC-Xtr-132712 Xenopus tropicalis 51.90 5.00e-109 387.00
Created Date 25-Jun-2017

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