iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107817

Ensembl Protein ID

EEB05620

UniProt Accession

B6JW69; B6JW69_SCHJY

Genbank Protein ID

EEB05620.2

Protein Name

Splicing factor Prp17

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_00639

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_00639	EEB05620	EEB05620

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-28	95.3	318	356
UBD/Beta-Prp	3.30e-46	155.8	266	477

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ s+++l+f +d ++++s+++D+t+k+WD+ tg++ +
   Q: 318  GHSKSIRDLCFgPDgKMFLSCAYDKTLKLWDTETGKCMQ 356
           8***********999*********************986 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
            k++ht++gh++ + +l+f+p++ + l+sGs d  +++w + ++  l  t+sgh+++++ +++ pdg+++ s+++D+t++lWd +tgk++++  +   +  
   Q: 266  KKQIHTWTGHKKGISALRFFPNTgHLLLSGSLDTDVKIWSTYHDRSLLRTFSGHSKSIRDLCFGPDGKMFLSCAYDKTLKLWDTETGKCMQRYAS--GRLT 364
           689******************555*********************************************************************65..7888 PP
   S: 184  yslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlv 281
           +++ f+ n    +e+++g  d+++  +d +t+++v+t++ h  +v+s+ f + +er+vs+s+D s r W + +  ++k ++ +  ++++  +l+++++ l+
   Q: 365  HCVRFQTNPnkpTEFLAGMADKRILQFDTRTNDVVQTYEQHLGPVNSLIFIEGGERFVSTSEDSSMRYWEYGTPIPIKYIADPTMHSMPRIALRPNGKSLL 465
           888888888889************************************************************************888888888*******9 PP
   S: 282  lgsedskvniwk 293
             s d++  +++
   Q: 466  CQSLDNCMYVYS 477
           999999999997 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MNMLVSGYTS DSDSSDASDQ TTSASIRVES TPTVVETFTE SESSVVKGLQ NGQLVKNVSI 60
QELARPELGP YNPYKTKEQD SKKNTITGYL EKEYVSNLTF DQNFHTYQKF GEVVKRKLNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACAGAAGGTA TTCGCGTTCG GAGACCTGAT TTTCGTGTCT AGTTAGCCAT CATGGTCCAC 60
CACTTCAGCT ATTAATACAA TAAAAATTGC AACACCAATT GGGTTGAAAA CAAGATGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071014--C:post-mRNA release spliceosomal complex
GO:0000974--C:Prp19 complex
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	36.94	1.00e-104	371.00
IUUC-Aml-002243	Ailuropoda melanoleuca	35.78	8.00e-83	298.00
IUUC-Atr-002502	Amborella trichopoda	48.84	8.00e-107	378.00
IUUC-Apl-003885	Anas platyrhynchos	40.46	3.00e-124	436.00
IUUC-Aca-004854	Anolis carolinensis	31.62	3.00e-71	260.00
IUUC-Aly-006158	Arabidopsis lyrata	48.26	2.00e-107	380.00
IUUC-Ath-007474	Arabidopsis thaliana	38.10	2.00e-107	380.00
IUUC-Ago-007726	Ashbya gossypii	38.35	2.00e-77	280.00
IUUC-Acl-008220	Aspergillus clavatus	43.90	8.00e-132	461.00
IUUC-Afl-008473	Aspergillus flavus	41.49	2.00e-128	451.00
IUUC-Afu-008773	Aspergillus fumigatus	44.74	1.00e-135	474.00
IUUC-Ani-009323	Aspergillus nidulans	43.52	7.00e-118	415.00
IUUC-Ang-009851	Aspergillus niger	42.61	2.00e-131	460.00
IUUC-Aor-009950	Aspergillus oryzae	41.49	2.00e-128	451.00
IUUC-Ate-010372	Aspergillus terreus	44.59	1.00e-133	467.00
IUUC-Ame-011660	Astyanax mexicanus	39.82	2.00e-126	444.00
IUUC-Bgr-012230	Blumeria graminis	44.16	5.00e-128	449.00
IUUC-Bta-012568	Bos taurus	38.77	4.00e-124	436.00
IUUC-Bci-013646	Botrytis cinerea	44.66	1.00e-128	451.00
IUUC-Bdi-014199	Brachypodium distachyon	36.78	4.00e-105	373.00
IUUC-Bol-015695	Brassica oleracea	37.43	2.00e-109	387.00
IUUC-Bra-017923	Brassica rapa	37.45	1.00e-110	391.00
IUUC-Cel-018535	Caenorhabditis elegans	34.22	3.00e-99	353.00
IUUC-Cja-019071	Callithrix jacchus	38.95	2.00e-124	437.00
IUUC-Cfa-020559	Canis familiaris	38.77	9.00e-124	435.00
IUUC-Cpo-022356	Cavia porcellus	39.13	7.00e-125	438.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	35.26	2.00e-61	226.00
IUUC-Csa-023125	Chlorocebus sabaeus	38.95	1.00e-124	437.00
IUUC-Cho-024676	Choloepus hoffmanni	44.67	3.00e-117	413.00
IUUC-Cin-025229	Ciona intestinalis	39.27	2.00e-121	426.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	40.51	2.00e-110	390.00
IUUC-Cne-026885	Cryptococcus neoformans	41.22	9.00e-118	415.00
IUUC-Dre-027631	Danio rerio	40.49	3.00e-124	436.00
IUUC-Dno-029815	Dasypus novemcinctus	37.91	1.00e-117	415.00
IUUC-Dor-030978	Dipodomys ordii	43.43	3.00e-110	389.00
IUUC-Dse-031520	Dothistroma septosporum	45.68	4.00e-113	399.00
IUUC-Dme-032050	Drosophila melanogaster	39.89	4.00e-120	423.00
IUUC-Ete-032866	Echinops telfairi	38.67	1.00e-119	421.00
IUUC-Eca-033384	Equus caballus	38.77	2.00e-122	430.00
IUUC-Eeu-034471	Erinaceus europaeus	33.03	3.00e-86	310.00
IUUC-Fca-035727	Felis catus	38.77	4.00e-124	436.00
IUUC-Fal-036774	Ficedula albicollis	41.71	2.00e-126	444.00
IUUC-Fox-037951	Fusarium oxysporum	44.64	9.00e-128	448.00
IUUC-Fso-038287	Fusarium solani	43.66	2.00e-124	437.00
IUUC-Gmo-039670	Gadus morhua	40.88	7.00e-126	442.00
IUUC-Ggr-039764	Gaeumannomyces graminis	42.30	1.00e-122	431.00
IUUC-Gga-040293	Gallus gallus	40.50	1.00e-124	438.00
IUUC-Gac-042159	Gasterosteus aculeatus	39.44	7.00e-127	445.00
IUUC-Gma-044299	Glycine max	49.42	3.00e-106	376.00
IUUC-Ggo-044864	Gorilla gorilla	38.77	4.00e-124	436.00
IUUC-Hsa-046602	Homo sapiens	38.77	4.00e-124	436.00
IUUC-Hvu-047431	Hordeum vulgare	23.67	2.00e-28	117.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	45.37	2.00e-115	407.00
IUUC-Kpa-049318	Komagataella pastoris	44.82	6.00e-100	355.00
IUUC-Lch-049796	Latimeria chalumnae	42.58	1.00e-101	362.00
IUUC-Lpe-051153	Leersia perrieri	37.24	2.00e-105	374.00
IUUC-Loc-052467	Lepisosteus oculatus	41.39	2.00e-127	447.00
IUUC-Lma-053107	Leptosphaeria maculans	47.66	6.00e-120	422.00
IUUC-Laf-053787	Loxodonta africana	39.15	5.00e-126	442.00
IUUC-Mcc-055706	Macaca mulatta	38.95	1.00e-124	437.00
IUUC-Meu-056757	Macropus eugenii	49.55	3.00e-98	350.00
IUUC-Mor-057079	Magnaporthe oryzae	42.42	3.00e-123	433.00
IUUC-Mpo-057533	Magnaporthe poae	45.45	1.00e-114	404.00
IUUC-Mtr-057950	Medicago truncatula	49.13	2.00e-107	380.00
IUUC-Mla-058910	Melampsora laricipopulina	45.48	3.00e-111	393.00
IUUC-Mga-059366	Meleagris gallopavo	40.50	2.00e-124	437.00
IUUC-Mvi-060349	Microbotryum violaceum	51.34	3.00e-111	394.00
IUUC-Mmr-061209	Microcebus murinus	39.29	4.00e-126	442.00
IUUC-Mdo-062118	Monodelphis domestica	42.07	4.00e-127	446.00
IUUC-Mmu-063173	Mus musculus	38.95	1.00e-124	437.00
IUUC-Mac-065109	Musa acuminata	37.17	6.00e-106	375.00
IUUC-Mpu-066659	Mustela putorius furo	39.10	4.00e-124	436.00
IUUC-Mlu-067029	Myotis lucifugus	40.58	3.00e-124	436.00
IUUC-Nfi-068334	Neosartorya fischeri	45.11	2.00e-136	477.00
IUUC-Ncr-068675	Neurospora crassa	40.61	6.00e-108	382.00
IUUC-Nle-070113	Nomascus leucogenys	40.15	2.00e-124	437.00
IUUC-Opr-070685	Ochotona princeps	51.30	8.00e-115	405.00
IUUC-Ont-071680	Oreochromis niloticus	40.30	2.00e-125	440.00
IUUC-Oan-073573	Ornithorhynchus anatinus	41.01	1.00e-121	427.00
IUUC-Ocu-074074	Oryctolagus cuniculus	39.49	2.00e-126	444.00
IUUC-Oba-075625	Oryza barthii	37.12	2.00e-105	374.00
IUUC-Obr-076510	Oryza brachyantha	37.16	2.00e-105	374.00
IUUC-Ogl-077275	Oryza glaberrima	37.12	2.00e-105	374.00
IUUC-Ogu-078563	Oryza glumaepatula	37.12	1.00e-105	374.00
IUUC-Oin-079898	Oryza indica	47.08	4.00e-102	362.00
IUUC-Olo-081080	Oryza longistaminata	37.04	2.00e-104	370.00
IUUC-Oni-083121	Oryza nivara	37.12	2.00e-105	374.00
IUUC-Opu-083329	Oryza punctata	37.31	2.00e-106	377.00
IUUC-Oru-084807	Oryza rufipogon	36.76	5.00e-92	329.00
IUUC-Osa-086039	Oryza sativa	37.24	3.00e-106	377.00
IUUC-Ola-087149	Oryzias latipes	40.99	3.00e-126	443.00
IUUC-Olu-087627	Ostreococcus lucimarinus	35.76	6.00e-97	345.00
IUUC-Oga-088359	Otolemur garnettii	38.88	2.00e-124	437.00
IUUC-Oar-089390	Ovis aries	38.77	9.00e-124	435.00
IUUC-Ptr-090894	Pan troglodytes	38.77	4.00e-124	436.00
IUUC-Pan-092476	Papio anubis	38.95	1.00e-124	437.00
IUUC-Psi-093527	Pelodiscus sinensis	40.49	2.00e-116	410.00
IUUC-Pno-094771	Phaeosphaeria nodorum	46.90	1.00e-117	414.00
IUUC-Ppa-095386	Physcomitrella patens	37.11	1.00e-106	378.00
IUUC-Pfo-096139	Poecilia formosa	40.30	3.00e-126	443.00
IUUC-Pab-097838	Pongo abelii	38.13	7.00e-110	388.00
IUUC-Pop-098945	Populus trichocarpa	47.97	1.00e-104	371.00
IUUC-Pca-100876	Procavia capensis	45.80	1.00e-95	342.00
IUUC-Ppe-101777	Prunus persica	49.12	1.00e-106	378.00
IUUC-Pva-102418	Pteropus vampyrus	39.27	6.00e-124	435.00
IUUC-Pgr-103456	Puccinia graminis	38.98	4.00e-121	426.00
IUUC-Ptt-103731	Puccinia triticina	37.06	5.00e-115	406.00
IUUC-Pte-104386	Pyrenophora teres	47.03	5.00e-115	405.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	47.27	9.00e-116	408.00
IUUC-Rno-105694	Rattus norvegicus	38.52	8.00e-117	412.00
IUUC-Sce-106339	Saccharomyces cerevisiae	42.32	3.00e-82	296.00
IUUC-Sha-106709	Sarcophilus harrisii	41.27	5.00e-125	439.00
IUUC-Spo-108331	Schizosaccharomyces pombe	59.59	0.00e+00	670.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	44.37	1.00e-118	417.00
IUUC-Smo-108778	Selaginella moellendorffii	35.44	4.00e-95	340.00
IUUC-Sit-110446	Setaria italica	47.95	2.00e-103	367.00
IUUC-Sly-111330	Solanum lycopersicum	48.55	5.00e-106	375.00
IUUC-Stu-112610	Solanum tuberosum	48.55	5.00e-106	376.00
IUUC-Sar-113065	Sorex araneus	39.30	2.00e-39	154.00
IUUC-Sbi-114005	Sorghum bicolor	48.25	1.00e-103	368.00
IUUC-Sre-114988	Sporisorium reilianum	44.36	4.00e-139	486.00
IUUC-Ssc-115760	Sus scrofa	38.77	5.00e-124	436.00
IUUC-Tgu-116493	Taeniopygia guttata	41.87	2.00e-128	450.00
IUUC-Tru-118489	Takifugu rubripes	39.50	2.00e-122	430.00
IUUC-Tsy-119332	Tarsius syrichta	39.29	8.00e-126	441.00
IUUC-Tni-120202	Tetraodon nigroviridis	38.05	4.00e-112	396.00
IUUC-Tca-121429	Theobroma cacao	47.67	8.00e-104	369.00
IUUC-Tre-122162	Trichoderma reesei	43.02	3.00e-126	442.00
IUUC-Tvi-122500	Trichoderma virens	42.77	4.00e-121	426.00
IUUC-Tae-125557	Triticum aestivum	36.87	3.00e-104	370.00
IUUC-Tur-126554	Triticum urartu	36.63	1.00e-102	364.00
IUUC-Tme-126919	Tuber melanosporum	46.07	3.00e-143	499.00
IUUC-Tbe-127968	Tupaia belangeri	36.89	3.00e-112	397.00
IUUC-Ttr-129215	Tursiops truncatus	39.03	4.00e-123	432.00
IUUC-Uma-129622	Ustilago maydis	42.73	2.00e-133	467.00
IUUC-Vda-129750	Verticillium dahliae	44.08	1.00e-126	444.00
IUUC-Vpa-130617	Vicugna pacos	40.15	3.00e-122	429.00
IUUC-Xtr-131865	Xenopus tropicalis	41.76	4.00e-124	436.00
IUUC-Xma-133627	Xiphophorus maculatus	40.11	1.00e-125	441.00
IUUC-Yli-134390	Yarrowia lipolytica	41.15	2.00e-110	390.00
IUUC-Zma-135925	Zea mays	38.09	9.00e-98	348.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence