iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2005__AT5G60410.5	fgenesh2_kg.8__2005__AT5G60410.5	fgenesh2_kg.8__2005__AT5G60410.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-11	44.5	113	166

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..CrewfHpaClkls.....veeelpnsekwiCpkCr 52
           + C vCg++ e++ s+++Ce+  C+ w+H++C+ l+      +++lp+s  ++C+ Cr
   Q: 113  VRC-VCGNSLETD-SMIQCEDprCHVWQHVGCVILPdkpmdGNPPLPES--FYCEICR 166
           579.*******88.7*********************9999999999999..******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDLEATCKDK LSYFRIKELK DVLTQLGLSK QGKKQELVDR ILTLLSDEQA AKVWSKKNTV 60
AKEEVAKLVD DTYRKMQVSG ASDLASKGQV SSDTSNLKVK GEPEDPFQPE IKVRCVCGNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAATCTTAT CAAAGCTGTG AAAACCCTAG TTTCCAATCC TCTCATTAAT CTATCAGTTT 60
CCGATTTCAT GGTATGTGTT TTCCGTTTAA AAGGACTTGT CTTTTGGAAT TTTAAGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003034--SAP_dom
IPR031141--SIZ1_plant
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR004181--Znf_MIZ
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50800--SAP
PS01359--ZF_PHD_1
PS51044--ZF_SP_RING

Pfam

PF02037--SAP
PF02891--zf-MIZ

SMART

SM00249--PHD
SM00513--SAP

Gene Ontology

GO:0005634--C:nucleus
GO:0019789--F:SUMO transferase activity
GO:0008270--F:zinc ion binding
GO:0016049--P:cell growth
GO:0031668--P:cellular response to extracellular stimulus

KEGG

aly:ARALYDRAFT_496189

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000121	Aegilops tauschii	52.14	0.00e+00	818.00
IUUC-Atr-002963	Amborella trichopoda	52.10	0.00e+00	798.00
IUUC-Apl-003376	Anas platyrhynchos	36.36	3.00e-18	86.30
IUUC-Ath-007617	Arabidopsis thaliana	95.36	0.00e+00	1684.00
IUUC-Ame-011812	Astyanax mexicanus	35.51	6.00e-17	82.00
IUUC-Bta-012457	Bos taurus	36.36	3.00e-18	86.30
IUUC-Bdi-014054	Brachypodium distachyon	52.02	0.00e+00	858.00
IUUC-Bol-015575	Brassica oleracea	81.75	0.00e+00	1417.00
IUUC-Bra-017793	Brassica rapa	81.19	0.00e+00	1393.00
IUUC-Cpo-021940	Cavia porcellus	31.29	2.00e-18	87.00
IUUC-Cre-022902	Chlamydomonas reinhardtii	25.93	1.00e-05	43.90
IUUC-Csa-023964	Chlorocebus sabaeus	35.45	5.00e-18	85.50
IUUC-Dre-027526	Danio rerio	36.45	2.00e-17	84.00
IUUC-Dno-029550	Dasypus novemcinctus	36.36	3.00e-18	86.30
IUUC-Dse-031254	Dothistroma septosporum	23.57	5.00e-16	78.60
IUUC-Ete-032366	Echinops telfairi	36.36	4.00e-18	85.90
IUUC-Fal-036926	Ficedula albicollis	36.36	5.00e-18	85.50
IUUC-Gmo-039058	Gadus morhua	29.45	3.00e-16	79.70
IUUC-Gga-040755	Gallus gallus	36.36	3.00e-18	86.30
IUUC-Gac-042204	Gasterosteus aculeatus	30.26	5.00e-19	89.00
IUUC-Gma-043219	Glycine max	64.59	0.00e+00	1110.00
IUUC-Hsa-046146	Homo sapiens	35.45	5.00e-18	85.50
IUUC-Hvu-047523	Hordeum vulgare	48.57	0.00e+00	626.00
IUUC-Lch-049611	Latimeria chalumnae	30.26	2.00e-18	87.00
IUUC-Lpe-050930	Leersia perrieri	51.35	0.00e+00	845.00
IUUC-Loc-052851	Lepisosteus oculatus	36.04	4.00e-18	85.90
IUUC-Laf-053486	Loxodonta africana	36.36	3.00e-18	86.30
IUUC-Mtr-058191	Medicago truncatula	63.32	0.00e+00	1065.00
IUUC-Mga-059790	Meleagris gallopavo	36.36	2.00e-18	86.30
IUUC-Mvi-060421	Microbotryum violaceum	24.92	6.00e-21	95.50
IUUC-Mmr-060785	Microcebus murinus	36.36	3.00e-18	86.30
IUUC-Mdo-061916	Monodelphis domestica	36.36	3.00e-18	86.70
IUUC-Mmu-063170	Mus musculus	36.36	3.00e-18	86.30
IUUC-Mac-064545	Musa acuminata	51.91	0.00e+00	870.00
IUUC-Nle-070004	Nomascus leucogenys	35.45	5.00e-18	85.50
IUUC-Ont-071607	Oreochromis niloticus	28.95	2.00e-18	86.70
IUUC-Oan-073567	Ornithorhynchus anatinus	37.04	5.00e-18	85.50
IUUC-Ocu-073833	Oryctolagus cuniculus	36.36	3.00e-18	86.30
IUUC-Oba-075465	Oryza barthii	51.94	0.00e+00	831.00
IUUC-Obr-076593	Oryza brachyantha	51.57	0.00e+00	841.00
IUUC-Ogl-076986	Oryza glaberrima	52.40	0.00e+00	859.00
IUUC-Ogu-078528	Oryza glumaepatula	42.07	8.00e-178	616.00
IUUC-Oin-079468	Oryza indica	51.65	0.00e+00	825.00
IUUC-Olo-080754	Oryza longistaminata	53.33	0.00e+00	819.00
IUUC-Ome-081939	Oryza meridionalis	49.64	0.00e+00	635.00
IUUC-Oni-082630	Oryza nivara	51.87	0.00e+00	837.00
IUUC-Opu-083453	Oryza punctata	52.04	0.00e+00	845.00
IUUC-Oru-084397	Oryza rufipogon	51.87	0.00e+00	838.00
IUUC-Osa-085396	Oryza sativa	52.35	0.00e+00	861.00
IUUC-Oga-088527	Otolemur garnettii	36.36	3.00e-18	86.30
IUUC-Ptr-091086	Pan troglodytes	35.45	5.00e-18	85.50
IUUC-Pan-092236	Papio anubis	35.45	5.00e-18	85.50
IUUC-Psi-093900	Pelodiscus sinensis	28.95	3.00e-18	86.30
IUUC-Pma-094693	Petromyzon marinus	30.06	6.00e-16	78.20
IUUC-Ppa-095158	Physcomitrella patens	45.66	4.00e-141	494.00
IUUC-Pfo-096236	Poecilia formosa	29.65	2.00e-18	87.00
IUUC-Pop-099241	Populus trichocarpa	65.96	0.00e+00	1095.00
IUUC-Ppe-101666	Prunus persica	68.40	0.00e+00	1194.00
IUUC-Rno-105980	Rattus norvegicus	31.29	3.00e-18	86.30
IUUC-Sit-110164	Setaria italica	50.59	0.00e+00	797.00
IUUC-Sbi-114516	Sorghum bicolor	49.29	4.00e-175	607.00
IUUC-Ssc-115394	Sus scrofa	31.03	2.00e-18	86.70
IUUC-Tgu-117164	Taeniopygia guttata	36.36	4.00e-18	85.50
IUUC-Tru-117960	Takifugu rubripes	32.73	1.00e-16	80.90
IUUC-Tsy-119069	Tarsius syrichta	36.36	3.00e-18	86.30
IUUC-Tni-120583	Tetraodon nigroviridis	32.73	1.00e-16	81.30
IUUC-Tca-121168	Theobroma cacao	67.65	0.00e+00	1192.00
IUUC-Tae-123882	Triticum aestivum	52.12	0.00e+00	842.00
IUUC-Vpa-130624	Vicugna pacos	30.65	2.00e-18	86.70
IUUC-Xtr-132733	Xenopus tropicalis	23.59	9.00e-18	84.70
IUUC-Xma-134201	Xiphophorus maculatus	29.39	2.00e-18	86.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence