iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099045

Ensembl Protein ID

POPTR_0016s03690.1

UniProt Accession

B9IHR8; B9IHR8_POPTR

Genbank Protein ID

EEF05012.1

Protein Name

Glycine-rich family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_576176; POPTR_0016s03690g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s03690	POPTR_0016s03690.1	POPTR_0016s03690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-08	34.1	232	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           ++vt+l+f  ++  ++++Gs  g++ ++Dlr+ ++
   Q: 232  EEVTALKFdeDGgFTMAVGSSGGKVLLYDLRSSHP 266
           5799****97445458**************99776 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATKGSGLKS TSINGVKIYM VSSQQRNPAS WVGSKKQRPS RKDKNYQQKI ELVQDLTFPT 60
ATSRIKVTPD GEFLIASGIH PPQIKVYELR EFALKFERHF DSEIIDFQIL DDDYSKLAFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACCGAC TATCACCACG GCAAGAACCT AAAAAACCTG CAAGCCACCA GCAGCAGCAA 60
CCACCATCTT CATTCAAGAA AGCAGTGCTT GCTAGCCGCC GTCACCGCCT CAAAAAGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR012580--NUC153
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF08159--NUC153

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0016s03690g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002265	Ailuropoda melanoleuca	41.21	5.00e-120	424.00
IUUC-Atr-002672	Amborella trichopoda	63.80	0.00e+00	862.00
IUUC-Apl-003542	Anas platyrhynchos	40.83	3.00e-124	438.00
IUUC-Aca-005271	Anolis carolinensis	41.97	7.00e-123	434.00
IUUC-Aly-005701	Arabidopsis lyrata	62.54	0.00e+00	797.00
IUUC-Acl-008049	Aspergillus clavatus	34.94	9.00e-83	300.00
IUUC-Afl-008525	Aspergillus flavus	32.71	4.00e-74	272.00
IUUC-Afu-008771	Aspergillus fumigatus	33.33	3.00e-77	282.00
IUUC-Ani-009182	Aspergillus nidulans	34.31	4.00e-77	281.00
IUUC-Ang-009747	Aspergillus niger	33.73	3.00e-78	286.00
IUUC-Aor-010115	Aspergillus oryzae	33.22	3.00e-74	272.00
IUUC-Ate-010433	Aspergillus terreus	34.08	3.00e-81	295.00
IUUC-Ame-011026	Astyanax mexicanus	41.70	1.00e-124	440.00
IUUC-Bgr-012140	Blumeria graminis	35.95	9.00e-80	290.00
IUUC-Bta-012677	Bos taurus	40.83	2.00e-117	416.00
IUUC-Bci-013962	Botrytis cinerea	37.12	2.00e-92	333.00
IUUC-Bdi-014976	Brachypodium distachyon	57.14	0.00e+00	738.00
IUUC-Bol-016296	Brassica oleracea	63.93	0.00e+00	838.00
IUUC-Bra-017696	Brassica rapa	63.92	0.00e+00	836.00
IUUC-Cja-018936	Callithrix jacchus	41.59	5.00e-121	427.00
IUUC-Cfa-021047	Canis familiaris	41.02	1.00e-119	423.00
IUUC-Cpo-022493	Cavia porcellus	41.40	5.00e-123	434.00
IUUC-Cre-022717	Chlamydomonas reinhardtii	41.48	4.00e-106	377.00
IUUC-Csa-023564	Chlorocebus sabaeus	41.40	6.00e-121	427.00
IUUC-Cho-024796	Choloepus hoffmanni	38.77	4.00e-104	371.00
IUUC-Cin-025362	Ciona intestinalis	39.66	1.00e-115	410.00
IUUC-Csv-026200	Ciona savignyi	39.47	3.00e-119	422.00
IUUC-Cgl-026431	Colletotrichum gloeosporioides	36.12	6.00e-95	341.00
IUUC-Dre-028028	Danio rerio	40.64	4.00e-123	435.00
IUUC-Dno-029793	Dasypus novemcinctus	36.82	2.00e-100	359.00
IUUC-Dse-031377	Dothistroma septosporum	33.84	2.00e-83	303.00
IUUC-Eca-034250	Equus caballus	41.40	4.00e-120	425.00
IUUC-Eeu-034774	Erinaceus europaeus	35.62	6.00e-71	261.00
IUUC-Fca-035379	Felis catus	41.59	6.00e-120	424.00
IUUC-Fal-037057	Ficedula albicollis	43.17	3.00e-125	442.00
IUUC-Fox-037993	Fusarium oxysporum	34.60	2.00e-90	326.00
IUUC-Fso-038448	Fusarium solani	35.26	1.00e-86	313.00
IUUC-Gmo-039112	Gadus morhua	41.21	3.00e-115	408.00
IUUC-Ggr-039755	Gaeumannomyces graminis	35.57	4.00e-81	295.00
IUUC-Gga-040368	Gallus gallus	42.91	2.00e-129	455.00
IUUC-Gac-041616	Gasterosteus aculeatus	40.57	2.00e-116	412.00
IUUC-Gma-043486	Glycine max	66.86	0.00e+00	860.00
IUUC-Ggo-045196	Gorilla gorilla	42.89	3.00e-110	391.00
IUUC-Hsa-046721	Homo sapiens	41.40	6.00e-121	427.00
IUUC-Kpa-049162	Komagataella pastoris	38.79	1.00e-107	383.00
IUUC-Lch-049455	Latimeria chalumnae	43.21	2.00e-117	415.00
IUUC-Lpe-051607	Leersia perrieri	57.23	0.00e+00	714.00
IUUC-Loc-052092	Lepisosteus oculatus	40.83	1.00e-112	400.00
IUUC-Laf-053696	Loxodonta africana	41.59	6.00e-122	431.00
IUUC-Mcc-055084	Macaca mulatta	41.59	3.00e-121	428.00
IUUC-Mor-056951	Magnaporthe oryzae	36.31	6.00e-85	307.00
IUUC-Mpo-057507	Magnaporthe poae	35.96	6.00e-80	291.00
IUUC-Mtr-058796	Medicago truncatula	64.58	0.00e+00	879.00
IUUC-Mga-059835	Meleagris gallopavo	42.64	2.00e-123	436.00
IUUC-Mmr-060753	Microcebus murinus	41.21	3.00e-120	425.00
IUUC-Mdo-061953	Monodelphis domestica	41.59	8.00e-122	430.00
IUUC-Mmu-064156	Mus musculus	41.40	2.00e-119	422.00
IUUC-Mac-064715	Musa acuminata	63.83	0.00e+00	707.00
IUUC-Mpu-066316	Mustela putorius furo	40.52	7.00e-111	394.00
IUUC-Mlu-068042	Myotis lucifugus	41.21	1.00e-119	423.00
IUUC-Nfi-068287	Neosartorya fischeri	35.22	2.00e-82	300.00
IUUC-Nle-069499	Nomascus leucogenys	41.40	7.00e-121	427.00
IUUC-Ont-071296	Oreochromis niloticus	41.89	5.00e-118	417.00
IUUC-Oan-072981	Ornithorhynchus anatinus	42.51	5.00e-86	311.00
IUUC-Ocu-073747	Oryctolagus cuniculus	41.40	3.00e-120	425.00
IUUC-Oba-075212	Oryza barthii	54.57	0.00e+00	734.00
IUUC-Obr-076689	Oryza brachyantha	56.85	0.00e+00	740.00
IUUC-Ogl-077430	Oryza glaberrima	57.85	0.00e+00	751.00
IUUC-Ogu-078810	Oryza glumaepatula	57.05	0.00e+00	715.00
IUUC-Oin-080198	Oryza indica	60.15	0.00e+00	676.00
IUUC-Olo-080954	Oryza longistaminata	55.44	0.00e+00	704.00
IUUC-Oni-082486	Oryza nivara	56.74	0.00e+00	712.00
IUUC-Opu-083430	Oryza punctata	58.33	0.00e+00	721.00
IUUC-Oru-084369	Oryza rufipogon	55.59	0.00e+00	703.00
IUUC-Osa-086017	Oryza sativa	64.68	5.00e-173	600.00
IUUC-Ola-086883	Oryzias latipes	41.28	1.00e-122	433.00
IUUC-Olu-087827	Ostreococcus lucimarinus	43.56	1.00e-135	476.00
IUUC-Oga-088491	Otolemur garnettii	41.59	4.00e-121	428.00
IUUC-Oar-089837	Ovis aries	40.83	3.00e-119	422.00
IUUC-Ptr-091505	Pan troglodytes	41.40	6.00e-121	427.00
IUUC-Pan-092216	Papio anubis	41.51	3.00e-119	421.00
IUUC-Psi-093189	Pelodiscus sinensis	42.26	6.00e-113	400.00
IUUC-Pma-094202	Petromyzon marinus	40.23	5.00e-123	434.00
IUUC-Ppa-095279	Physcomitrella patens	49.56	4.00e-172	597.00
IUUC-Pfo-096989	Poecilia formosa	41.70	5.00e-115	407.00
IUUC-Pab-097557	Pongo abelii	41.97	3.00e-121	428.00
IUUC-Ppe-101835	Prunus persica	70.92	0.00e+00	918.00
IUUC-Pva-102467	Pteropus vampyrus	38.45	1.00e-112	399.00
IUUC-Rno-105733	Rattus norvegicus	41.59	5.00e-120	424.00
IUUC-Sha-107422	Sarcophilus harrisii	38.44	3.00e-71	261.00
IUUC-Ssl-108549	Sclerotinia sclerotiorum	35.77	3.00e-92	332.00
IUUC-Sit-109854	Setaria italica	58.63	0.00e+00	780.00
IUUC-Sly-111732	Solanum lycopersicum	65.17	0.00e+00	813.00
IUUC-Sar-113281	Sorex araneus	39.46	2.00e-89	323.00
IUUC-Sbi-114144	Sorghum bicolor	59.25	0.00e+00	767.00
IUUC-Ssc-116083	Sus scrofa	41.21	3.00e-119	422.00
IUUC-Tru-117757	Takifugu rubripes	40.11	9.00e-118	417.00
IUUC-Tni-119895	Tetraodon nigroviridis	41.54	4.00e-113	401.00
IUUC-Tre-121876	Trichoderma reesei	36.20	3.00e-90	325.00
IUUC-Tvi-122641	Trichoderma virens	35.84	4.00e-89	322.00
IUUC-Vpa-130401	Vicugna pacos	37.69	7.00e-91	327.00
IUUC-Vvi-131160	Vitis vinifera	70.58	0.00e+00	899.00
IUUC-Xma-134256	Xiphophorus maculatus	40.94	1.00e-113	403.00
IUUC-Zma-135860	Zea mays	58.96	0.00e+00	784.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence