iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000013262.3	ENSSSCT00000035985.1	ENSSSCP00000028953.1
ENSSSCG00000013262.3	ENSSSCT00000014486.2	ENSSSCP00000014094.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-08	32.5	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTisGLIASGCLDGEVRIWDLH 126
           6777779*****76779***************97 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGT RTFGAQRLLQ ELVEDKTRWM KWEGKRVELP DSPRSTFLLA 60
FSPDRTLLAS THVNHNIYIT EVKTGKCVHS LIGHRRTPWC VTFHPTISGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNTG GAGCTGTTGC 60
TCGCTCCTTC TTTTCCTGTG CCTGGTGAGA CAGTGGCTAC TGAGCGCCAT GAAGGTTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0043231--C:intracellular membrane-bounded organelle
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	97.31	0.00e+00	1810.00
IUUC-Atr-002557	Amborella trichopoda	37.74	4.00e-30	126.00
IUUC-Apl-004186	Anas platyrhynchos	82.18	0.00e+00	1940.00
IUUC-Aca-004419	Anolis carolinensis	77.58	0.00e+00	1826.00
IUUC-Aly-006308	Arabidopsis lyrata	38.07	8.00e-29	121.00
IUUC-Ath-007656	Arabidopsis thaliana	37.09	2.00e-28	120.00
IUUC-Ame-011354	Astyanax mexicanus	59.19	0.00e+00	1303.00
IUUC-Bta-012455	Bos taurus	95.54	0.00e+00	2246.00
IUUC-Bdi-014580	Brachypodium distachyon	42.33	3.00e-30	126.00
IUUC-Bol-016094	Brassica oleracea	40.22	6.00e-29	122.00
IUUC-Bra-017308	Brassica rapa	40.76	6.00e-30	125.00
IUUC-Cja-019073	Callithrix jacchus	96.17	3.00e-166	578.00
IUUC-Cfa-020994	Canis familiaris	95.43	0.00e+00	1535.00
IUUC-Cpo-022101	Cavia porcellus	94.76	0.00e+00	2203.00
IUUC-Csa-023273	Chlorocebus sabaeus	95.72	0.00e+00	1611.00
IUUC-Cin-025567	Ciona intestinalis	52.20	4.00e-56	212.00
IUUC-Csv-026005	Ciona savignyi	51.26	4.00e-56	210.00
IUUC-Dre-028282	Danio rerio	58.61	0.00e+00	1289.00
IUUC-Dno-029948	Dasypus novemcinctus	95.61	0.00e+00	2237.00
IUUC-Dor-030568	Dipodomys ordii	96.22	0.00e+00	1258.00
IUUC-Ete-032864	Echinops telfairi	95.00	0.00e+00	1182.00
IUUC-Eca-034392	Equus caballus	96.77	0.00e+00	1645.00
IUUC-Eeu-034440	Erinaceus europaeus	87.26	0.00e+00	1244.00
IUUC-Fca-035359	Felis catus	94.41	0.00e+00	2194.00
IUUC-Fal-037483	Ficedula albicollis	82.46	0.00e+00	1977.00
IUUC-Gmo-039343	Gadus morhua	75.41	0.00e+00	776.00
IUUC-Gga-040787	Gallus gallus	83.15	0.00e+00	1250.00
IUUC-Gac-041321	Gasterosteus aculeatus	62.16	0.00e+00	1365.00
IUUC-Gma-044022	Glycine max	36.63	2.00e-29	124.00
IUUC-Ggo-044775	Gorilla gorilla	96.15	0.00e+00	1071.00
IUUC-Hsa-045708	Homo sapiens	97.00	0.00e+00	2285.00
IUUC-Hvu-047536	Hordeum vulgare	41.57	1.00e-29	124.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	97.11	0.00e+00	1260.00
IUUC-Lch-050255	Latimeria chalumnae	70.02	0.00e+00	1422.00
IUUC-Lpe-050684	Leersia perrieri	41.76	1.00e-30	128.00
IUUC-Loc-052881	Lepisosteus oculatus	67.65	0.00e+00	1498.00
IUUC-Laf-053342	Loxodonta africana	72.57	0.00e+00	980.00
IUUC-Mcc-055848	Macaca mulatta	94.85	0.00e+00	2256.00
IUUC-Meu-056320	Macropus eugenii	84.89	0.00e+00	1094.00
IUUC-Mtr-058484	Medicago truncatula	37.56	1.00e-29	124.00
IUUC-Mga-059401	Meleagris gallopavo	86.01	0.00e+00	1680.00
IUUC-Mmr-061037	Microcebus murinus	95.78	0.00e+00	2221.00
IUUC-Mdo-062484	Monodelphis domestica	75.46	0.00e+00	1695.00
IUUC-Mmu-064090	Mus musculus	95.00	0.00e+00	2221.00
IUUC-Mac-065675	Musa acuminata	35.32	2.00e-29	124.00
IUUC-Mpu-066165	Mustela putorius furo	95.52	0.00e+00	1541.00
IUUC-Mlu-068038	Myotis lucifugus	95.23	0.00e+00	2294.00
IUUC-Nle-069361	Nomascus leucogenys	97.78	0.00e+00	1959.00
IUUC-Opr-070360	Ochotona princeps	93.27	0.00e+00	883.00
IUUC-Ont-071277	Oreochromis niloticus	63.54	0.00e+00	1372.00
IUUC-Oan-073623	Ornithorhynchus anatinus	83.21	0.00e+00	1030.00
IUUC-Ocu-074600	Oryctolagus cuniculus	96.97	0.00e+00	1414.00
IUUC-Oba-075024	Oryza barthii	38.19	4.00e-32	133.00
IUUC-Obr-076172	Oryza brachyantha	34.71	4.00e-33	136.00
IUUC-Ogl-077411	Oryza glaberrima	38.19	5.00e-32	132.00
IUUC-Ogu-078025	Oryza glumaepatula	38.19	6.00e-32	133.00
IUUC-Oni-082463	Oryza nivara	38.19	4.00e-32	133.00
IUUC-Opu-084041	Oryza punctata	38.19	9.00e-32	131.00
IUUC-Oru-085075	Oryza rufipogon	38.19	1.00e-31	131.00
IUUC-Osa-085781	Oryza sativa	38.19	5.00e-32	132.00
IUUC-Ola-086729	Oryzias latipes	63.52	0.00e+00	1395.00
IUUC-Olu-087735	Ostreococcus lucimarinus	40.32	6.00e-24	105.00
IUUC-Oga-089113	Otolemur garnettii	94.85	0.00e+00	2145.00
IUUC-Oar-090171	Ovis aries	96.14	0.00e+00	2092.00
IUUC-Ptr-090970	Pan troglodytes	97.08	0.00e+00	2287.00
IUUC-Pan-092778	Papio anubis	96.14	0.00e+00	1627.00
IUUC-Psi-093571	Pelodiscus sinensis	81.80	0.00e+00	1965.00
IUUC-Pma-094563	Petromyzon marinus	73.75	1.00e-105	375.00
IUUC-Ppa-095832	Physcomitrella patens	36.70	5.00e-30	126.00
IUUC-Pfo-097365	Poecilia formosa	61.21	0.00e+00	1279.00
IUUC-Pab-098647	Pongo abelii	97.08	0.00e+00	1257.00
IUUC-Pop-099742	Populus trichocarpa	40.66	1.00e-29	124.00
IUUC-Pca-101035	Procavia capensis	92.64	0.00e+00	1193.00
IUUC-Ppe-101783	Prunus persica	39.30	1.00e-29	124.00
IUUC-Pva-103187	Pteropus vampyrus	98.22	0.00e+00	943.00
IUUC-Rno-105701	Rattus norvegicus	94.93	0.00e+00	2205.00
IUUC-Sha-107612	Sarcophilus harrisii	85.52	0.00e+00	2002.00
IUUC-Smo-108871	Selaginella moellendorffii	39.08	6.00e-27	115.00
IUUC-Sit-110786	Setaria italica	38.12	2.00e-32	134.00
IUUC-Sly-110859	Solanum lycopersicum	37.62	1.00e-31	131.00
IUUC-Stu-112031	Solanum tuberosum	38.10	1.00e-31	131.00
IUUC-Sar-113242	Sorex araneus	94.70	0.00e+00	1084.00
IUUC-Tru-118308	Takifugu rubripes	61.86	0.00e+00	1322.00
IUUC-Tsy-119552	Tarsius syrichta	93.75	0.00e+00	1237.00
IUUC-Tca-121616	Theobroma cacao	37.80	4.00e-31	129.00
IUUC-Tae-124768	Triticum aestivum	42.17	3.00e-30	126.00
IUUC-Tur-126480	Triticum urartu	42.17	2.00e-30	127.00
IUUC-Tbe-127902	Tupaia belangeri	93.84	0.00e+00	970.00
IUUC-Ttr-129278	Tursiops truncatus	95.00	0.00e+00	1218.00
IUUC-Vpa-130741	Vicugna pacos	90.58	0.00e+00	843.00
IUUC-Vvi-131437	Vitis vinifera	45.45	4.00e-29	123.00
IUUC-Xtr-132247	Xenopus tropicalis	64.74	0.00e+00	1321.00
IUUC-Xma-134277	Xiphophorus maculatus	61.66	0.00e+00	1395.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence