iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           Ht+ v++l+f   +++ll+sG+ D  i +WDl
   Q: 90   HTGAVRALDFnpfQGNLLASGASDSEIFIWDL 121
           ***********97669***************8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAAMAAAAMA AAAAPPAAAA VSGSVQSCLA QARTTCARFH KLIWGSSSSG LLENTGVIAG 60
GGDSGMLTLY NVTHILSPGK EPLIAQKQKH TGAVRALDFN PFQGNLLASG ASDSEIFIWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAGCTGTG GCCAGGGCAA ATTTACTTTT GGCCCTAGGC AGCCGCCATC CGCAGTGCGG 60
TGCACTCTGA AGCGCTAGGC TGAGACAGGA CCGGTTCAGG AGGTCGCCCG TGACCCCTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0030120--C:vesicle coat

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001690	Ailuropoda melanoleuca	74.82	0.00e+00	1489.00
IUUC-Apl-003403	Anas platyrhynchos	54.12	0.00e+00	1037.00
IUUC-Bta-013361	Bos taurus	73.70	0.00e+00	1475.00
IUUC-Cel-018546	Caenorhabditis elegans	29.17	2.00e-40	161.00
IUUC-Cja-019085	Callithrix jacchus	76.59	0.00e+00	1527.00
IUUC-Cfa-021148	Canis familiaris	73.88	0.00e+00	1453.00
IUUC-Cpo-022389	Cavia porcellus	63.76	0.00e+00	1267.00
IUUC-Csa-023347	Chlorocebus sabaeus	76.28	0.00e+00	1485.00
IUUC-Dor-030341	Dipodomys ordii	69.71	0.00e+00	1280.00
IUUC-Eca-034383	Equus caballus	76.14	0.00e+00	1471.00
IUUC-Eeu-035236	Erinaceus europaeus	70.40	0.00e+00	1335.00
IUUC-Fca-035781	Felis catus	74.66	0.00e+00	1486.00
IUUC-Fal-037298	Ficedula albicollis	54.48	0.00e+00	1023.00
IUUC-Ggo-044594	Gorilla gorilla	75.38	0.00e+00	1487.00
IUUC-Hsa-046370	Homo sapiens	75.67	0.00e+00	1524.00
IUUC-Itr-048539	Ictidomys tridecemlineatus	75.34	0.00e+00	1448.00
IUUC-Laf-053384	Loxodonta africana	75.36	0.00e+00	1420.00
IUUC-Mcc-055035	Macaca mulatta	76.03	0.00e+00	1504.00
IUUC-Meu-056451	Macropus eugenii	58.03	6.00e-138	485.00
IUUC-Mga-060086	Meleagris gallopavo	51.44	0.00e+00	993.00
IUUC-Mdo-062939	Monodelphis domestica	63.82	0.00e+00	1112.00
IUUC-Mmu-064098	Mus musculus	88.83	0.00e+00	1820.00
IUUC-Mpu-066837	Mustela putorius furo	75.09	0.00e+00	1454.00
IUUC-Mlu-067865	Myotis lucifugus	75.27	0.00e+00	1466.00
IUUC-Nle-070089	Nomascus leucogenys	74.73	0.00e+00	1531.00
IUUC-Opr-070212	Ochotona princeps	66.11	0.00e+00	1280.00
IUUC-Oan-073744	Ornithorhynchus anatinus	61.23	0.00e+00	941.00
IUUC-Ocu-073839	Oryctolagus cuniculus	75.58	0.00e+00	1150.00
IUUC-Oga-088552	Otolemur garnettii	74.60	0.00e+00	1498.00
IUUC-Oar-090193	Ovis aries	73.10	0.00e+00	1464.00
IUUC-Ptr-090462	Pan troglodytes	67.37	0.00e+00	805.00
IUUC-Pan-092057	Papio anubis	76.39	0.00e+00	1486.00
IUUC-Pab-098721	Pongo abelii	73.25	0.00e+00	1452.00
IUUC-Pca-100606	Procavia capensis	68.40	0.00e+00	1294.00
IUUC-Pva-102315	Pteropus vampyrus	75.25	0.00e+00	1514.00
IUUC-Sha-106924	Sarcophilus harrisii	64.00	0.00e+00	1193.00
IUUC-Sly-111112	Solanum lycopersicum	31.98	2.00e-100	360.00
IUUC-Sar-113151	Sorex araneus	60.45	0.00e+00	736.00
IUUC-Ssc-116348	Sus scrofa	74.22	0.00e+00	1447.00
IUUC-Tgu-116489	Taeniopygia guttata	54.17	0.00e+00	1014.00
IUUC-Tbe-127257	Tupaia belangeri	79.27	5.00e-152	531.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence