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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-104930
Ensembl Protein ID ENSRNOP00000014324.4
UniProt Accession D4ADT7; D4ADT7_RAT
Genbank Protein ID EDL88106.1
Protein Name Nucleotide-binding oligomerization domain-containing 1; Similar to Caspase recruitment domain protein 4 (Predicted)
Genbank Nucleotide ID AABR07060610
Gene Name Nod1; RGD1562269_predicted; rCG_52437
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000010629.6 ENSRNOT00000088085.1 ENSRNOP00000074999.1
ENSRNOG00000010629.6 ENSRNOT00000014324.6 ENSRNOP00000014324.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/CARD 81.53 0.00e+00 1518.00 IUUC-Hsa-046886
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MEKRGQHEME GVPAGCHSHI KLLRINREHL VTNIRNTQCL VDNLLENGYF SAEDAEIVCA 60
CPTQPDKVRK ILDLVQSKGE EVSEFFLYVL QQLEDAYVDL RLWLSEIGFS PSQLIRTKTI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-104930|UBD,CARD|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCCAGTTCCT GATCCCAAAC CGCGAGCGGC AGTGCTGCTG TGCCGCCAGA TCTGCGACCC 60
TAGTCCAGGA TCCCTGTGCT GAGAGCCGCC GTACTCCAGG GCCACCTGAG CCAAAGTCCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-104930|UBD,CARD|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR007109--Brix
IPR001315--CARD
IPR011029--DEATH-like_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR007111--NACHT_NTPase
PROSITE

PS50209--CARD
PS50837--NACHT
Pfam

PF00619--CARD
PF13516--LRR_6
Gene Ontology

GO:0016323--C:basolateral plasma membrane
GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0006919--P:activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0071225--P:cellular response to muramyl dipeptide
GO:0050830--P:defense response to Gram-positive bacterium
GO:0016045--P:detection of bacterium
GO:0042228--P:interleukin-8 biosynthetic process
GO:0035556--P:intracellular signal transduction
GO:0010942--P:positive regulation of cell death
GO:0002606--P:positive regulation of dendritic cell antigen processing and presentation
GO:0070374--P:positive regulation of ERK1 and ERK2 cascade
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0032731--P:positive regulation of interleukin-1 beta production
GO:0032755--P:positive regulation of interleukin-6 production
GO:0046330--P:positive regulation of JNK cascade
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:1901224--P:positive regulation of NIK/NF-kappaB signaling
GO:0051000--P:positive regulation of nitric-oxide synthase activity
GO:0032760--P:positive regulation of tumor necrosis factor production
GO:1904417--P:positive regulation of xenophagy
KEGG rno:500133
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001299 Ailuropoda melanoleuca 77.86 0.00e+00 1331.00
IUUC-Apl-003908 Anas platyrhynchos 60.68 0.00e+00 1124.00
IUUC-Aca-005144 Anolis carolinensis 59.62 0.00e+00 1114.00
IUUC-Ame-010829 Astyanax mexicanus 51.29 0.00e+00 901.00
IUUC-Bta-013358 Bos taurus 79.04 0.00e+00 1410.00
IUUC-Cja-019392 Callithrix jacchus 80.80 0.00e+00 1462.00
IUUC-Cfa-020776 Canis familiaris 79.01 0.00e+00 1407.00
IUUC-Cpo-021393 Cavia porcellus 79.77 0.00e+00 1455.00
IUUC-Csa-023872 Chlorocebus sabaeus 81.64 0.00e+00 1505.00
IUUC-Cho-024569 Choloepus hoffmanni 69.47 1.00e-170 593.00
IUUC-Dre-027478 Danio rerio 50.27 0.00e+00 865.00
IUUC-Dno-029231 Dasypus novemcinctus 78.17 0.00e+00 1431.00
IUUC-Dor-030251 Dipodomys ordii 58.49 3.00e-161 562.00
IUUC-Ete-032484 Echinops telfairi 68.82 0.00e+00 724.00
IUUC-Eca-033564 Equus caballus 79.60 0.00e+00 1448.00
IUUC-Eeu-034456 Erinaceus europaeus 67.00 1.00e-138 486.00
IUUC-Fca-036372 Felis catus 78.28 0.00e+00 1411.00
IUUC-Fal-037418 Ficedula albicollis 60.85 0.00e+00 1130.00
IUUC-Gmo-038740 Gadus morhua 50.16 0.00e+00 891.00
IUUC-Gga-040775 Gallus gallus 60.89 0.00e+00 1165.00
IUUC-Gac-041612 Gasterosteus aculeatus 49.58 0.00e+00 891.00
IUUC-Ggo-045161 Gorilla gorilla 81.05 0.00e+00 1263.00
IUUC-Hsa-046886 Homo sapiens 81.53 0.00e+00 1499.00
IUUC-Itr-048414 Ictidomys tridecemlineatus 83.79 0.00e+00 1595.00
IUUC-Lch-049764 Latimeria chalumnae 57.35 0.00e+00 999.00
IUUC-Loc-052143 Lepisosteus oculatus 53.99 0.00e+00 991.00
IUUC-Laf-053503 Loxodonta africana 77.75 0.00e+00 1432.00
IUUC-Mcc-054992 Macaca mulatta 81.43 0.00e+00 1501.00
IUUC-Meu-056406 Macropus eugenii 61.57 0.00e+00 1073.00
IUUC-Mga-059351 Meleagris gallopavo 60.04 0.00e+00 1155.00
IUUC-Mmr-061537 Microcebus murinus 81.43 0.00e+00 1405.00
IUUC-Mdo-061832 Monodelphis domestica 64.29 0.00e+00 1063.00
IUUC-Mmu-064282 Mus musculus 95.55 0.00e+00 1748.00
IUUC-Mpu-066399 Mustela putorius furo 79.01 0.00e+00 1421.00
IUUC-Mlu-067265 Myotis lucifugus 77.63 0.00e+00 1372.00
IUUC-Nle-069078 Nomascus leucogenys 80.90 0.00e+00 1494.00
IUUC-Opr-070946 Ochotona princeps 72.68 0.00e+00 1318.00
IUUC-Ont-071355 Oreochromis niloticus 48.32 0.00e+00 892.00
IUUC-Oan-072937 Ornithorhynchus anatinus 71.18 0.00e+00 1317.00
IUUC-Ocu-073815 Oryctolagus cuniculus 79.22 0.00e+00 1486.00
IUUC-Ola-087381 Oryzias latipes 50.16 0.00e+00 883.00
IUUC-Oga-088725 Otolemur garnettii 79.85 0.00e+00 1464.00
IUUC-Oar-090401 Ovis aries 76.62 0.00e+00 1416.00
IUUC-Ptr-090590 Pan troglodytes 81.43 0.00e+00 1499.00
IUUC-Pan-091765 Papio anubis 81.43 0.00e+00 1501.00
IUUC-Psi-093182 Pelodiscus sinensis 61.00 0.00e+00 1134.00
IUUC-Ppa-095344 Physcomitrella patens 26.88 6.00e-03 36.60
IUUC-Pfo-097422 Poecilia formosa 48.62 0.00e+00 874.00
IUUC-Pab-098289 Pongo abelii 81.32 0.00e+00 1489.00
IUUC-Pca-100165 Procavia capensis 70.57 0.00e+00 985.00
IUUC-Pva-102943 Pteropus vampyrus 79.43 0.00e+00 1452.00
IUUC-Pte-104155 Pyrenophora teres 29.17 2.00e-01 30.80
IUUC-Sha-106800 Sarcophilus harrisii 47.10 0.00e+00 653.00
IUUC-Sar-113205 Sorex araneus 69.39 0.00e+00 956.00
IUUC-Ssc-115910 Sus scrofa 79.88 0.00e+00 1268.00
IUUC-Tgu-117179 Taeniopygia guttata 61.60 0.00e+00 1146.00
IUUC-Tru-118220 Takifugu rubripes 49.31 0.00e+00 867.00
IUUC-Tsy-119418 Tarsius syrichta 73.45 0.00e+00 1212.00
IUUC-Tni-120033 Tetraodon nigroviridis 52.35 4.00e-71 260.00
IUUC-Tur-126397 Triticum urartu 34.85 1.70e-01 29.30
IUUC-Tbe-127308 Tupaia belangeri 81.74 6.00e-174 604.00
IUUC-Ttr-129233 Tursiops truncatus 78.70 0.00e+00 1430.00
IUUC-Vpa-130620 Vicugna pacos 78.09 1.00e-107 384.00
IUUC-Xtr-132075 Xenopus tropicalis 53.05 0.00e+00 994.00
Created Date 25-Jun-2017

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