iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000010383.2	ENSSSCT00000011366.2	ENSSSCP00000011072.2
ENSSSCG00000010383.2	ENSSSCT00000026607.1	ENSSSCP00000023964.1
ENSSSCG00000010383.2	ENSSSCT00000032344.1	ENSSSCP00000023752.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-10	40.7	2974	3006

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gHt  vtcla     +llvsGs D t+ +WDl+
   Q: 2974 GHTQAVTCLAAsVPfNLLVSGSQDRTCILWDLD 3006
           8*******98873348***************86 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

ETLGRVAESG LPALLLQCLY LFFVFPLEKD ELFESDIQVQ RMFVQMLINI CSETQGLEGL 60
LSGNELQSLM IATTCLREHS CSFWKEPTFC VLKAISKAQN LSVIQYLQAM DCIKISLQNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGCGA AAGACGTCTC AAAGGCTGAA GACAGGGCTG AGGATCCAGG TTCTGAAAAT 60
AAAGGCCAGC CTGATATTGC CGCTCCTGAC CTCCCACAAG GAGGGCAGAC CCCTGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013119	Bos taurus	78.36	0.00e+00	3247.00
IUUC-Cel-018315	Caenorhabditis elegans	25.33	1.00e-18	89.40
IUUC-Cja-019166	Callithrix jacchus	74.32	0.00e+00	4370.00
IUUC-Cfa-021196	Canis familiaris	76.46	0.00e+00	3136.00
IUUC-Cpo-021853	Cavia porcellus	68.78	0.00e+00	2519.00
IUUC-Cho-024719	Choloepus hoffmanni	55.71	9.00e-175	608.00
IUUC-Dno-028965	Dasypus novemcinctus	68.46	0.00e+00	1662.00
IUUC-Dor-030745	Dipodomys ordii	75.70	0.00e+00	1039.00
IUUC-Ete-032877	Echinops telfairi	72.28	0.00e+00	1071.00
IUUC-Eca-034106	Equus caballus	74.51	0.00e+00	2744.00
IUUC-Fca-036341	Felis catus	75.05	0.00e+00	1934.00
IUUC-Fal-036739	Ficedula albicollis	50.59	0.00e+00	1974.00
IUUC-Gga-041220	Gallus gallus	51.73	0.00e+00	2065.00
IUUC-Ggo-045630	Gorilla gorilla	76.46	0.00e+00	3129.00
IUUC-Hsa-046627	Homo sapiens	76.09	0.00e+00	3144.00
IUUC-Itr-048709	Ictidomys tridecemlineatus	73.32	0.00e+00	4333.00
IUUC-Lch-049803	Latimeria chalumnae	57.67	0.00e+00	921.00
IUUC-Mcc-055003	Macaca mulatta	74.47	0.00e+00	4397.00
IUUC-Mmr-060933	Microcebus murinus	74.28	0.00e+00	3080.00
IUUC-Mmu-064029	Mus musculus	70.23	0.00e+00	2847.00
IUUC-Mpu-065681	Mustela putorius furo	77.06	0.00e+00	3162.00
IUUC-Nle-069676	Nomascus leucogenys	76.50	0.00e+00	3148.00
IUUC-Ont-072509	Oreochromis niloticus	38.48	0.00e+00	1258.00
IUUC-Ocu-074714	Oryctolagus cuniculus	72.29	0.00e+00	2953.00
IUUC-Oga-087927	Otolemur garnettii	73.05	0.00e+00	2977.00
IUUC-Oar-089783	Ovis aries	78.59	0.00e+00	3155.00
IUUC-Pan-092402	Papio anubis	74.60	0.00e+00	4398.00
IUUC-Pfo-096036	Poecilia formosa	39.63	0.00e+00	1982.00
IUUC-Pva-102690	Pteropus vampyrus	87.50	0.00e+00	1364.00
IUUC-Ptt-103873	Puccinia triticina	47.38	1.00e-93	339.00
IUUC-Rno-105815	Rattus norvegicus	70.12	0.00e+00	2835.00
IUUC-Sha-107025	Sarcophilus harrisii	60.73	0.00e+00	3632.00
IUUC-Tbe-127325	Tupaia belangeri	64.17	0.00e+00	1233.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence