iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090530

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03105609

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000008015.5	ENSPTRT00000014789.3	ENSPTRP00000013697.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	41.98	6.00e-89	326.00	IUUC-Dme-032034
E3 activity/RING/RING	99.28	0.00e+00	1379.00	IUUC-Hsa-045732
E3 activity/RING/RING	91.47	0.00e+00	1248.00	IUUC-Rno-105165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSGPGNKRAA GDGGSGPPEK KLSREEKTTT TLIEPIRLGG ISSTEEMDLK VLQFKNKKLA 60
ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLR CHESQGELSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGGGC CAGGCAACAA ACGCGCCGCC GGCGACGGGG GCTCAGGGCC CCCGGAGAAG 60
AAGCTGAGTC GTGAGGAGAA GACCACCACG ACTCTTATCG AGCCCATTCG TCTTGGAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0033503--C:HULC complex
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0003730--F:mRNA 3'-UTR binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0033523--P:histone H2B ubiquitination
GO:0010390--P:histone monoubiquitination
GO:1900364--P:negative regulation of mRNA polyadenylation
GO:2001168--P:positive regulation of histone H2B ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	29.84	3.00e-13	70.50
IUUC-Aml-002295	Ailuropoda melanoleuca	96.75	0.00e+00	1363.00
IUUC-Aca-004850	Anolis carolinensis	76.14	0.00e+00	677.00
IUUC-Aly-006055	Arabidopsis lyrata	50.00	1.00e-15	79.00
IUUC-Bta-013173	Bos taurus	94.95	0.00e+00	1332.00
IUUC-Cja-019042	Callithrix jacchus	96.87	0.00e+00	1345.00
IUUC-Cfa-020318	Canis familiaris	96.39	0.00e+00	1358.00
IUUC-Cpo-021539	Cavia porcellus	94.46	0.00e+00	1338.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	44.00	2.00e-06	47.40
IUUC-Csa-024051	Chlorocebus sabaeus	98.56	0.00e+00	1318.00
IUUC-Cgl-026569	Colletotrichum gloeosporioides	40.38	2.00e-09	57.80
IUUC-Dno-028892	Dasypus novemcinctus	94.71	0.00e+00	1288.00
IUUC-Dor-030268	Dipodomys ordii	93.49	0.00e+00	777.00
IUUC-Dme-032034	Drosophila melanogaster	40.70	4.00e-148	519.00
IUUC-Ete-032505	Echinops telfairi	91.50	2.00e-168	586.00
IUUC-Eca-033436	Equus caballus	96.75	0.00e+00	1392.00
IUUC-Eeu-035291	Erinaceus europaeus	88.66	0.00e+00	997.00
IUUC-Fca-035720	Felis catus	95.79	0.00e+00	1355.00
IUUC-Fso-038414	Fusarium solani	36.51	1.00e-09	58.50
IUUC-Gac-041303	Gasterosteus aculeatus	64.62	1.00e-151	530.00
IUUC-Ggo-045426	Gorilla gorilla	99.64	0.00e+00	1415.00
IUUC-Hsa-045732	Homo sapiens	99.28	0.00e+00	1446.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	95.79	0.00e+00	1337.00
IUUC-Lma-053312	Leptosphaeria maculans	37.63	5.00e-15	76.30
IUUC-Laf-054267	Loxodonta africana	95.31	0.00e+00	1346.00
IUUC-Mcc-055240	Macaca mulatta	98.56	0.00e+00	1319.00
IUUC-Meu-056750	Macropus eugenii	80.71	0.00e+00	1068.00
IUUC-Mor-057068	Magnaporthe oryzae	37.50	5.00e-12	66.60
IUUC-Mmr-061177	Microcebus murinus	96.15	0.00e+00	1353.00
IUUC-Mdo-062415	Monodelphis domestica	80.87	0.00e+00	1087.00
IUUC-Mmu-063981	Mus musculus	91.46	0.00e+00	1301.00
IUUC-Mpu-066498	Mustela putorius furo	94.95	0.00e+00	1273.00
IUUC-Mlu-067242	Myotis lucifugus	93.98	0.00e+00	1319.00
IUUC-Nle-069320	Nomascus leucogenys	99.21	0.00e+00	825.00
IUUC-Opr-070286	Ochotona princeps	92.77	0.00e+00	1034.00
IUUC-Oan-073538	Ornithorhynchus anatinus	77.48	0.00e+00	628.00
IUUC-Ocu-073799	Oryctolagus cuniculus	95.67	0.00e+00	1345.00
IUUC-Ola-086435	Oryzias latipes	68.95	3.00e-157	549.00
IUUC-Oga-089016	Otolemur garnettii	88.31	0.00e+00	1221.00
IUUC-Oar-089589	Ovis aries	95.43	0.00e+00	1343.00
IUUC-Pan-092502	Papio anubis	98.56	0.00e+00	1321.00
IUUC-Psi-093155	Pelodiscus sinensis	71.97	9.00e-142	497.00
IUUC-Pfo-097527	Poecilia formosa	50.83	3.00e-156	546.00
IUUC-Pab-098619	Pongo abelii	98.92	0.00e+00	1402.00
IUUC-Pca-100544	Procavia capensis	94.10	0.00e+00	1330.00
IUUC-Pva-102479	Pteropus vampyrus	96.18	0.00e+00	1053.00
IUUC-Pte-104415	Pyrenophora teres	35.11	6.00e-13	69.70
IUUC-Pyt-104762	Pyrenophora triticirepentis	35.11	3.00e-13	70.10
IUUC-Rno-105165	Rattus norvegicus	91.47	0.00e+00	1274.00
IUUC-Sha-107602	Sarcophilus harrisii	82.90	0.00e+00	1122.00
IUUC-Ssl-108546	Sclerotinia sclerotiorum	37.74	2.00e-08	54.30
IUUC-Sit-110382	Setaria italica	42.42	8.00e-15	75.90
IUUC-Sar-113755	Sorex araneus	93.26	0.00e+00	1280.00
IUUC-Ssc-116134	Sus scrofa	95.20	0.00e+00	1370.00
IUUC-Tru-117867	Takifugu rubripes	65.68	1.00e-148	520.00
IUUC-Tsy-119065	Tarsius syrichta	90.99	0.00e+00	1264.00
IUUC-Tni-120802	Tetraodon nigroviridis	61.00	0.00e+00	725.00
IUUC-Tca-121060	Theobroma cacao	48.48	6.00e-16	79.70
IUUC-Tre-122150	Trichoderma reesei	39.62	4.00e-10	60.10
IUUC-Tvi-122431	Trichoderma virens	39.62	4.00e-10	60.10
IUUC-Tbe-127597	Tupaia belangeri	83.88	0.00e+00	710.00
IUUC-Ttr-128303	Tursiops truncatus	94.72	0.00e+00	1288.00
IUUC-Vda-129815	Verticillium dahliae	39.66	8.00e-10	58.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence