iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026597

Ensembl Protein ID

ELA35602

UniProt Accession

L2GAG1; L2GAG1_COLGN

Genbank Protein ID

ELA35602.1

Protein Name

WD40 domain-containing protein

Genbank Nucleotide ID

KB020561

Gene Name

CGGC5_4686

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_4686	ELA35602	ELA35602

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-36	120.9	232	269
UBD/Beta-Prp	1.70e-46	158.4	144	392

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           Ht+s++++++  d t +v++s D t++vWD+ +g+ ++
   Q: 232  HTGSIFAVSWsEDgTKFVTASADQTVRVWDVESGKATQ 269
           **********9556********************9887 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksl.latgsrdgtikvwdvttgkl.lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..ghedsvlslsfsps 105
           h++v+++v++ ++++l  at s+d++i      + k+  +  s h ++v  + fspdg++lvt++ D+ i+++d +tg+++  +   +h+ s+ ++s+s++
   Q: 144  HSKVVNSVAVRQQRPLrAATVSDDSSICFLHGAPFKFnSKHASIHRGFVFGTAFSPDGSLLVTVGADKRIQLYDGKTGEPTKQIGegEHTGSIFAVSWSED 244
           778999999966666526788999999655555555526666******************************************9889************* PP
   S: 106  gdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsg 198
           g k+v++s+d+t+rvwd+e+g+  ++       s+ d+ v +v  h+ +  l++s  lD+ +   +  ++k  r  +g h++ ++ l  +s+g  k l +g
   Q: 245  GTKFVTASADQTVRVWDVESGKATQTwkfgdGVSIGDQQVGVVWPHGRSdGLIISLNLDGDLIYLNEGSDKPSRIVQG-HNKNITALGTSSDGqgKTLWTG 344
           *************************99999977777888999999999999************99999*********9.*******995555545****** PP
   S: 199  sldgtvklwdlqtgec.vrtlnghtdnvksvrfspnderlvsgssDgsir 247
           s dg+v  wd+++g   v+  ++h+++v++  +        s++ D ++r
   Q: 345  SFDGRVCQWDVESGVGsVVDGQAHSNQVTQFSAE--AGQTFSVGWDDTLR 392
           ************7732488889999999976666..55555556666665 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MSVNIEKILA ASPATQRGQP TQLSTDKKGE RIAYAAGKSI FLRSIDNPSV SKQYTGHTAQ 60
TSVARFSPSG FYVASGDVSG SVRVWDAVEA ENTKGEYHII SGRINDIGWD GDSQRIIAVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTGTCA ACATCGAAAA GATCCTAGCT GCCTCGCCCG CCACGCAGCG AGGCCAGCCA 60
ACACAGCTGT CGACCGACAA GAAGGGCGAG CGTATCGCGT ACGCGGTCAG TTGATTCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR011043--Gal_Oxase/kelch_b-propeller
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030479--C:actin cortical patch
GO:0005884--C:actin filament
GO:0032153--C:cell division site
GO:0051286--C:cell tip
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0030042--P:actin filament depolymerization
GO:0051016--P:barbed-end actin filament capping
GO:0032466--P:negative regulation of cytokinesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	30.24	2.00e-54	204.00
IUUC-Aml-002368	Ailuropoda melanoleuca	38.27	3.00e-113	400.00
IUUC-Atr-003160	Amborella trichopoda	33.44	1.00e-87	315.00
IUUC-Apl-004012	Anas platyrhynchos	37.13	1.00e-109	388.00
IUUC-Aca-004707	Anolis carolinensis	36.97	7.00e-111	392.00
IUUC-Aly-006423	Arabidopsis lyrata	32.22	1.00e-87	315.00
IUUC-Ath-006829	Arabidopsis thaliana	32.67	6.00e-88	316.00
IUUC-Ago-007920	Ashbya gossypii	39.23	2.00e-111	394.00
IUUC-Acl-008262	Aspergillus clavatus	58.51	0.00e+00	686.00
IUUC-Afl-008471	Aspergillus flavus	40.68	1.00e-111	395.00
IUUC-Afu-008989	Aspergillus fumigatus	55.27	2.00e-175	607.00
IUUC-Ani-009167	Aspergillus nidulans	56.84	0.00e+00	692.00
IUUC-Ang-009595	Aspergillus niger	57.09	0.00e+00	634.00
IUUC-Aor-009908	Aspergillus oryzae	56.72	0.00e+00	640.00
IUUC-Ate-010580	Aspergillus terreus	57.36	0.00e+00	683.00
IUUC-Ame-011269	Astyanax mexicanus	33.66	7.00e-59	219.00
IUUC-Bgr-011996	Blumeria graminis	57.47	0.00e+00	733.00
IUUC-Bta-013278	Bos taurus	38.44	4.00e-116	410.00
IUUC-Bci-013925	Botrytis cinerea	64.32	0.00e+00	797.00
IUUC-Bdi-014659	Brachypodium distachyon	32.25	1.00e-77	282.00
IUUC-Bol-016043	Brassica oleracea	32.29	1.00e-85	308.00
IUUC-Bra-017719	Brassica rapa	32.08	1.00e-85	308.00
IUUC-Cel-018417	Caenorhabditis elegans	36.41	3.00e-99	353.00
IUUC-Cja-019952	Callithrix jacchus	37.79	3.00e-111	394.00
IUUC-Cfa-020225	Canis familiaris	38.11	1.00e-113	401.00
IUUC-Cpo-021900	Cavia porcellus	37.93	2.00e-112	398.00
IUUC-Csa-023028	Chlorocebus sabaeus	37.30	3.00e-110	390.00
IUUC-Cho-025030	Choloepus hoffmanni	30.72	6.00e-63	233.00
IUUC-Cin-025152	Ciona intestinalis	36.82	5.00e-53	199.00
IUUC-Csv-025986	Ciona savignyi	28.54	2.00e-50	191.00
IUUC-Cne-026814	Cryptococcus neoformans	36.25	9.00e-106	375.00
IUUC-Dre-027498	Danio rerio	46.11	6.00e-50	188.00
IUUC-Dno-029383	Dasypus novemcinctus	37.95	6.00e-111	392.00
IUUC-Dor-030633	Dipodomys ordii	37.83	8.00e-101	359.00
IUUC-Dse-031526	Dothistroma septosporum	61.79	0.00e+00	747.00
IUUC-Dme-031597	Drosophila melanogaster	37.77	3.00e-114	404.00
IUUC-Ete-032780	Echinops telfairi	37.00	8.00e-100	355.00
IUUC-Eca-034306	Equus caballus	37.93	1.00e-108	385.00
IUUC-Eeu-034531	Erinaceus europaeus	35.42	6.00e-47	179.00
IUUC-Fca-036301	Felis catus	38.75	5.00e-116	409.00
IUUC-Fal-037361	Ficedula albicollis	38.30	2.00e-116	411.00
IUUC-Fox-037924	Fusarium oxysporum	65.57	0.00e+00	790.00
IUUC-Fso-038199	Fusarium solani	63.76	0.00e+00	790.00
IUUC-Gmo-039238	Gadus morhua	36.75	1.00e-107	381.00
IUUC-Ggr-039830	Gaeumannomyces graminis	67.75	0.00e+00	762.00
IUUC-Gga-040235	Gallus gallus	37.79	1.00e-114	405.00
IUUC-Gac-042363	Gasterosteus aculeatus	36.04	5.00e-105	373.00
IUUC-Gma-043218	Glycine max	32.91	2.00e-84	305.00
IUUC-Ggo-044632	Gorilla gorilla	36.59	1.00e-105	375.00
IUUC-Hsa-045792	Homo sapiens	38.05	8.00e-112	395.00
IUUC-Hvu-047517	Hordeum vulgare	32.69	9.00e-83	299.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	39.22	2.00e-115	407.00
IUUC-Kpa-049183	Komagataella pastoris	43.71	4.00e-126	443.00
IUUC-Lch-050428	Latimeria chalumnae	37.13	5.00e-113	399.00
IUUC-Lpe-051306	Leersia perrieri	33.22	2.00e-87	314.00
IUUC-Loc-052096	Lepisosteus oculatus	33.17	1.00e-88	318.00
IUUC-Lma-053313	Leptosphaeria maculans	58.84	0.00e+00	710.00
IUUC-Laf-054060	Loxodonta africana	37.36	5.00e-108	383.00
IUUC-Mcc-055619	Macaca mulatta	36.60	4.00e-106	377.00
IUUC-Meu-056689	Macropus eugenii	41.48	8.00e-51	193.00
IUUC-Mor-056940	Magnaporthe oryzae	68.14	0.00e+00	773.00
IUUC-Mpo-057557	Magnaporthe poae	56.84	1.00e-170	590.00
IUUC-Mtr-058478	Medicago truncatula	32.95	3.00e-85	307.00
IUUC-Mla-059103	Melampsora laricipopulina	37.50	5.00e-89	320.00
IUUC-Mga-060150	Meleagris gallopavo	38.03	4.00e-115	406.00
IUUC-Mvi-060448	Microbotryum violaceum	37.38	1.00e-95	342.00
IUUC-Mmr-061226	Microcebus murinus	36.64	9.00e-108	382.00
IUUC-Mdo-062674	Monodelphis domestica	38.27	3.00e-113	400.00
IUUC-Mmu-064170	Mus musculus	37.13	5.00e-113	399.00
IUUC-Mac-065124	Musa acuminata	35.12	1.00e-88	318.00
IUUC-Mpu-066001	Mustela putorius furo	37.21	1.00e-109	389.00
IUUC-Mlu-067253	Myotis lucifugus	38.06	3.00e-109	387.00
IUUC-Nfi-068550	Neosartorya fischeri	56.86	0.00e+00	696.00
IUUC-Ncr-068948	Neurospora crassa	68.28	0.00e+00	814.00
IUUC-Nle-070115	Nomascus leucogenys	38.00	4.00e-99	353.00
IUUC-Opr-070254	Ochotona princeps	37.50	2.00e-106	377.00
IUUC-Ont-071666	Oreochromis niloticus	37.40	6.00e-106	376.00
IUUC-Oan-073292	Ornithorhynchus anatinus	51.47	1.00e-40	156.00
IUUC-Ocu-074824	Oryctolagus cuniculus	37.36	1.00e-108	385.00
IUUC-Oba-075010	Oryza barthii	32.74	5.00e-86	310.00
IUUC-Obr-076364	Oryza brachyantha	32.90	2.00e-86	311.00
IUUC-Ogl-077019	Oryza glaberrima	32.74	5.00e-86	310.00
IUUC-Ogu-078496	Oryza glumaepatula	32.74	5.00e-86	310.00
IUUC-Oin-080116	Oryza indica	32.57	1.00e-85	308.00
IUUC-Olo-080290	Oryza longistaminata	32.74	1.00e-85	308.00
IUUC-Ome-081969	Oryza meridionalis	32.74	5.00e-86	310.00
IUUC-Oni-082075	Oryza nivara	32.57	8.00e-86	309.00
IUUC-Opu-083959	Oryza punctata	32.90	4.00e-86	310.00
IUUC-Oru-084711	Oryza rufipogon	32.74	5.00e-86	310.00
IUUC-Osa-085958	Oryza sativa	32.57	1.00e-85	308.00
IUUC-Ola-086968	Oryzias latipes	38.83	6.00e-115	406.00
IUUC-Oga-089108	Otolemur garnettii	38.13	2.00e-113	401.00
IUUC-Oar-089986	Ovis aries	35.74	9.00e-101	359.00
IUUC-Ptr-091281	Pan troglodytes	37.99	2.00e-111	394.00
IUUC-Pan-092585	Papio anubis	37.30	2.00e-110	391.00
IUUC-Psi-093811	Pelodiscus sinensis	36.82	3.00e-112	397.00
IUUC-Pma-094396	Petromyzon marinus	38.30	2.00e-115	407.00
IUUC-Pno-095086	Phaeosphaeria nodorum	60.19	0.00e+00	704.00
IUUC-Ppa-095876	Physcomitrella patens	34.27	3.00e-86	310.00
IUUC-Pfo-096973	Poecilia formosa	39.15	6.00e-117	412.00
IUUC-Pab-098391	Pongo abelii	37.62	2.00e-110	391.00
IUUC-Pop-098850	Populus trichocarpa	34.42	4.00e-87	313.00
IUUC-Pca-100257	Procavia capensis	50.59	6.00e-17	80.50
IUUC-Ppe-101578	Prunus persica	33.22	1.00e-82	298.00
IUUC-Pva-102872	Pteropus vampyrus	36.63	6.00e-106	376.00
IUUC-Pgr-103593	Puccinia graminis	37.99	1.00e-100	358.00
IUUC-Pte-104365	Pyrenophora teres	60.16	0.00e+00	687.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	60.72	0.00e+00	706.00
IUUC-Rno-105737	Rattus norvegicus	38.60	2.00e-116	411.00
IUUC-Sce-106383	Saccharomyces cerevisiae	37.79	8.00e-106	375.00
IUUC-Sha-107084	Sarcophilus harrisii	39.08	2.00e-101	361.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	41.37	5.00e-142	496.00
IUUC-Spo-108309	Schizosaccharomyces pombe	42.76	8.00e-130	455.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	63.77	0.00e+00	795.00
IUUC-Smo-109255	Selaginella moellendorffii	31.45	5.00e-78	283.00
IUUC-Sit-109962	Setaria italica	33.33	6.00e-84	303.00
IUUC-Sly-110897	Solanum lycopersicum	32.69	3.00e-83	301.00
IUUC-Stu-111971	Solanum tuberosum	31.99	6.00e-81	293.00
IUUC-Sar-113415	Sorex araneus	40.44	3.00e-21	95.10
IUUC-Sbi-114857	Sorghum bicolor	32.51	3.00e-82	297.00
IUUC-Sre-114900	Sporisorium reilianum	39.86	2.00e-110	390.00
IUUC-Tgu-117256	Taeniopygia guttata	38.69	3.00e-117	413.00
IUUC-Tru-117871	Takifugu rubripes	36.95	4.00e-110	390.00
IUUC-Tsy-119172	Tarsius syrichta	44.53	7.00e-53	199.00
IUUC-Tni-120339	Tetraodon nigroviridis	38.69	3.00e-117	414.00
IUUC-Tca-121563	Theobroma cacao	34.85	1.00e-89	322.00
IUUC-Tre-122076	Trichoderma reesei	58.55	0.00e+00	709.00
IUUC-Tvi-122528	Trichoderma virens	58.65	0.00e+00	745.00
IUUC-Tae-123530	Triticum aestivum	32.85	4.00e-82	296.00
IUUC-Tur-126845	Triticum urartu	29.42	9.00e-53	199.00
IUUC-Tme-127217	Tuber melanosporum	50.24	3.00e-166	577.00
IUUC-Tbe-127526	Tupaia belangeri	36.99	1.00e-105	375.00
IUUC-Ttr-128898	Tursiops truncatus	35.45	8.00e-97	345.00
IUUC-Uma-129631	Ustilago maydis	40.29	9.00e-119	419.00
IUUC-Vda-129732	Verticillium dahliae	64.94	0.00e+00	807.00
IUUC-Vvi-131217	Vitis vinifera	33.22	2.00e-83	301.00
IUUC-Xtr-132860	Xenopus tropicalis	34.62	1.00e-94	338.00
IUUC-Xma-133830	Xiphophorus maculatus	38.66	7.00e-117	412.00
IUUC-Yli-134335	Yarrowia lipolytica	40.83	1.00e-110	391.00
IUUC-Zma-135907	Zea mays	33.33	2.00e-83	301.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence