iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107939

Ensembl Protein ID

EEB06530

UniProt Accession

B6JYB2; B6JYB2_SCHJY

Genbank Protein ID

EEB06530.2

Protein Name

WDR70 family WD repeat protein

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_01573

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_01573	EEB06530	EEB06530

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-19	66.6	263	292

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sd.tllvsGsdDgtikvWDlrt 32
           v+++a+  sd + ++++ +Dg+++ WDlr+
   Q: 263  VSACAWnpSDeNQICTAVNDGSVHFWDLRS 292
           8899***9889****************986 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MRMSSSDENA EVFDGMEAAI PASFGKQQVK QNPQLLLKQF ERNKEQDELC YKTTISKEPI 60
SQEKSDDDDD SSSSDGWSDE SDDEDVGVPS SHELVLKEHS KCITTGTFDV SGTRFISGSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGACGGCTG ATTGATAGCC CGAAACCTTG GAGCTGCGTT GTTTTGAGAT GTCTCGACTT 60
GCCGTGAGGG TGGAAGACTG TTGACATTTT GAGAAACTCG TTCTTGCGTC AAGTCGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0035861--C:site of double-strand break
GO:1903775--P:regulation of DNA double-strand break processing
GO:2001173--P:regulation of histone H2B conserved C-terminal lysine ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000150	Aegilops tauschii	32.16	2.00e-59	221.00
IUUC-Aml-002098	Ailuropoda melanoleuca	26.87	4.00e-31	126.00
IUUC-Atr-002886	Amborella trichopoda	31.89	2.00e-58	218.00
IUUC-Apl-004059	Anas platyrhynchos	29.55	2.00e-52	198.00
IUUC-Aca-004427	Anolis carolinensis	30.94	1.00e-60	225.00
IUUC-Aly-006122	Arabidopsis lyrata	31.09	3.00e-60	224.00
IUUC-Ath-006952	Arabidopsis thaliana	31.29	2.00e-61	228.00
IUUC-Acl-008150	Aspergillus clavatus	34.26	4.00e-76	276.00
IUUC-Afl-008722	Aspergillus flavus	33.97	4.00e-77	280.00
IUUC-Afu-009003	Aspergillus fumigatus	33.65	2.00e-77	281.00
IUUC-Ani-009306	Aspergillus nidulans	33.97	4.00e-79	286.00
IUUC-Ang-009780	Aspergillus niger	33.53	1.00e-75	275.00
IUUC-Aor-010109	Aspergillus oryzae	33.97	4.00e-77	280.00
IUUC-Ate-010484	Aspergillus terreus	33.02	4.00e-76	276.00
IUUC-Ame-011248	Astyanax mexicanus	30.72	2.00e-60	224.00
IUUC-Bgr-012093	Blumeria graminis	32.27	2.00e-77	281.00
IUUC-Bta-013581	Bos taurus	29.50	5.00e-58	216.00
IUUC-Bci-013900	Botrytis cinerea	32.45	9.00e-81	292.00
IUUC-Bdi-014951	Brachypodium distachyon	31.57	8.00e-62	229.00
IUUC-Bol-016482	Brassica oleracea	30.52	4.00e-59	220.00
IUUC-Bra-016976	Brassica rapa	30.57	6.00e-58	216.00
IUUC-Cel-018229	Caenorhabditis elegans	25.83	7.00e-36	143.00
IUUC-Cja-019101	Callithrix jacchus	30.04	6.00e-58	216.00
IUUC-Cfa-020638	Canis familiaris	29.31	8.00e-58	216.00
IUUC-Cpo-022323	Cavia porcellus	29.50	1.00e-58	219.00
IUUC-Csa-023743	Chlorocebus sabaeus	29.31	5.00e-57	213.00
IUUC-Cho-024356	Choloepus hoffmanni	23.79	5.00e-16	77.40
IUUC-Cin-025151	Ciona intestinalis	28.17	1.00e-56	212.00
IUUC-Csv-025820	Ciona savignyi	28.15	2.00e-55	208.00
IUUC-Cgl-026404	Colletotrichum gloeosporioides	31.69	2.00e-77	281.00
IUUC-Cne-026790	Cryptococcus neoformans	35.42	2.00e-69	254.00
IUUC-Dno-029526	Dasypus novemcinctus	29.31	2.00e-57	215.00
IUUC-Dse-031347	Dothistroma septosporum	33.97	2.00e-80	290.00
IUUC-Dme-032052	Drosophila melanogaster	28.88	8.00e-57	213.00
IUUC-Ete-032851	Echinops telfairi	25.55	1.00e-25	108.00
IUUC-Eca-033418	Equus caballus	30.67	9.00e-11	60.50
IUUC-Fca-035931	Felis catus	29.50	4.00e-58	217.00
IUUC-Fal-037139	Ficedula albicollis	30.31	8.00e-57	213.00
IUUC-Fox-037696	Fusarium oxysporum	32.88	1.00e-77	281.00
IUUC-Fso-038349	Fusarium solani	30.90	1.00e-73	268.00
IUUC-Gmo-039027	Gadus morhua	29.46	6.00e-59	220.00
IUUC-Ggr-039982	Gaeumannomyces graminis	30.82	3.00e-58	217.00
IUUC-Gga-041080	Gallus gallus	29.84	2.00e-56	211.00
IUUC-Gac-041296	Gasterosteus aculeatus	29.32	7.00e-56	209.00
IUUC-Gma-044316	Glycine max	32.23	3.00e-61	227.00
IUUC-Ggo-045123	Gorilla gorilla	29.19	6.00e-50	189.00
IUUC-Hsa-046541	Homo sapiens	29.31	1.00e-56	212.00
IUUC-Itr-048403	Ictidomys tridecemlineatus	29.50	1.00e-58	219.00
IUUC-Lch-050163	Latimeria chalumnae	30.77	3.00e-61	227.00
IUUC-Lpe-051614	Leersia perrieri	32.09	5.00e-62	230.00
IUUC-Loc-052721	Lepisosteus oculatus	28.43	4.00e-60	223.00
IUUC-Lma-053034	Leptosphaeria maculans	31.27	7.00e-69	253.00
IUUC-Laf-053704	Loxodonta africana	29.50	6.00e-58	216.00
IUUC-Mcc-055688	Macaca mulatta	29.31	9.00e-57	213.00
IUUC-Mor-057275	Magnaporthe oryzae	32.06	6.00e-74	269.00
IUUC-Mpo-057450	Magnaporthe poae	31.91	3.00e-71	260.00
IUUC-Mtr-057970	Medicago truncatula	31.71	4.00e-62	230.00
IUUC-Mla-059172	Melampsora laricipopulina	32.14	8.00e-69	252.00
IUUC-Mvi-060266	Microbotryum violaceum	30.34	4.00e-62	230.00
IUUC-Mmr-061611	Microcebus murinus	29.70	2.00e-58	218.00
IUUC-Mdo-062609	Monodelphis domestica	30.16	3.00e-58	217.00
IUUC-Mmu-064354	Mus musculus	29.17	4.00e-58	217.00
IUUC-Mac-065632	Musa acuminata	31.85	2.00e-64	238.00
IUUC-Mpu-066749	Mustela putorius furo	29.11	2.00e-57	215.00
IUUC-Mlu-067579	Myotis lucifugus	29.70	8.00e-59	219.00
IUUC-Nfi-068556	Neosartorya fischeri	33.46	3.00e-77	280.00
IUUC-Ncr-068877	Neurospora crassa	32.53	3.00e-74	270.00
IUUC-Nle-069176	Nomascus leucogenys	29.31	9.00e-57	212.00
IUUC-Opr-070293	Ochotona princeps	29.30	1.00e-56	212.00
IUUC-Ont-071297	Oreochromis niloticus	29.21	8.00e-55	206.00
IUUC-Oan-073450	Ornithorhynchus anatinus	34.13	3.00e-13	65.50
IUUC-Ocu-074449	Oryctolagus cuniculus	29.31	3.00e-58	218.00
IUUC-Oba-075858	Oryza barthii	31.76	2.00e-61	228.00
IUUC-Obr-076052	Oryza brachyantha	31.21	1.00e-61	228.00
IUUC-Ogl-077756	Oryza glaberrima	31.60	5.00e-62	230.00
IUUC-Ogu-078993	Oryza glumaepatula	31.76	1.00e-61	229.00
IUUC-Oin-079429	Oryza indica	31.60	2.00e-61	228.00
IUUC-Olo-080823	Oryza longistaminata	31.90	8.00e-58	215.00
IUUC-Ome-081852	Oryza meridionalis	31.79	1.00e-62	232.00
IUUC-Oni-082474	Oryza nivara	31.57	7.00e-61	226.00
IUUC-Opu-083450	Oryza punctata	32.45	4.00e-63	234.00
IUUC-Oru-084642	Oryza rufipogon	31.76	8.00e-62	229.00
IUUC-Osa-086011	Oryza sativa	31.41	5.00e-61	226.00
IUUC-Ola-086398	Oryzias latipes	28.51	2.00e-56	211.00
IUUC-Olu-087769	Ostreococcus lucimarinus	29.61	6.00e-43	166.00
IUUC-Oga-088727	Otolemur garnettii	29.59	1.00e-58	218.00
IUUC-Oar-090392	Ovis aries	29.70	8.00e-59	219.00
IUUC-Ptr-090921	Pan troglodytes	29.31	2.00e-56	211.00
IUUC-Pan-092085	Papio anubis	29.55	7.00e-54	203.00
IUUC-Psi-093709	Pelodiscus sinensis	30.37	2.00e-58	218.00
IUUC-Pno-095050	Phaeosphaeria nodorum	31.38	2.00e-64	238.00
IUUC-Ppa-095333	Physcomitrella patens	31.13	2.00e-57	215.00
IUUC-Pfo-097401	Poecilia formosa	28.60	2.00e-55	208.00
IUUC-Pab-097766	Pongo abelii	29.31	1.00e-56	212.00
IUUC-Pop-099011	Populus trichocarpa	33.01	9.00e-64	236.00
IUUC-Pca-100351	Procavia capensis	23.98	1.00e-11	62.80
IUUC-Ppe-101384	Prunus persica	31.07	5.00e-60	223.00
IUUC-Pva-102654	Pteropus vampyrus	29.50	4.00e-58	217.00
IUUC-Pgr-103415	Puccinia graminis	32.12	7.00e-70	256.00
IUUC-Ptt-103925	Puccinia triticina	32.20	6.00e-70	256.00
IUUC-Pte-104394	Pyrenophora teres	30.92	6.00e-67	246.00
IUUC-Pyt-104674	Pyrenophora triticirepentis	30.53	8.00e-67	246.00
IUUC-Rno-105663	Rattus norvegicus	29.50	2.00e-59	221.00
IUUC-Sha-107567	Sarcophilus harrisii	30.75	1.00e-60	225.00
IUUC-Spo-108037	Schizosaccharomyces pombe	48.70	5.00e-156	542.00
IUUC-Ssl-108526	Sclerotinia sclerotiorum	32.94	7.00e-81	292.00
IUUC-Smo-108751	Selaginella moellendorffii	31.07	8.00e-62	229.00
IUUC-Sit-110170	Setaria italica	32.16	2.00e-62	231.00
IUUC-Sly-111518	Solanum lycopersicum	29.78	6.00e-50	189.00
IUUC-Stu-112755	Solanum tuberosum	31.76	1.00e-60	225.00
IUUC-Sar-113590	Sorex araneus	26.53	2.00e-33	135.00
IUUC-Sbi-114091	Sorghum bicolor	32.35	6.00e-63	233.00
IUUC-Sre-115111	Sporisorium reilianum	29.45	1.00e-34	139.00
IUUC-Ssc-115453	Sus scrofa	29.25	4.00e-55	206.00
IUUC-Tgu-117285	Taeniopygia guttata	30.50	1.00e-56	211.00
IUUC-Tru-118474	Takifugu rubripes	28.19	7.00e-55	206.00
IUUC-Tsy-119547	Tarsius syrichta	29.10	1.00e-46	179.00
IUUC-Tni-120818	Tetraodon nigroviridis	27.97	2.00e-57	214.00
IUUC-Tca-121621	Theobroma cacao	32.82	1.00e-62	232.00
IUUC-Tre-122146	Trichoderma reesei	31.58	3.00e-74	270.00
IUUC-Tvi-122353	Trichoderma virens	31.29	1.00e-73	268.00
IUUC-Tae-123385	Triticum aestivum	34.34	1.00e-48	185.00
IUUC-Tur-125971	Triticum urartu	32.11	1.00e-54	205.00
IUUC-Tme-127185	Tuber melanosporum	29.04	2.00e-63	234.00
IUUC-Tbe-127554	Tupaia belangeri	35.48	3.00e-17	81.30
IUUC-Ttr-128995	Tursiops truncatus	29.50	4.00e-58	217.00
IUUC-Uma-129618	Ustilago maydis	25.00	5.00e-28	117.00
IUUC-Vda-129832	Verticillium dahliae	30.97	5.00e-65	239.00
IUUC-Vpa-130592	Vicugna pacos	25.84	5.00e-22	97.10
IUUC-Vvi-131574	Vitis vinifera	32.62	5.00e-63	233.00
IUUC-Xtr-132234	Xenopus tropicalis	29.14	1.00e-58	219.00
IUUC-Xma-133780	Xiphophorus maculatus	28.34	7.00e-56	209.00
IUUC-Yli-134658	Yarrowia lipolytica	28.86	9.00e-09	53.10
IUUC-Zma-135697	Zea mays	31.76	6.00e-61	226.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence