iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htd.svtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d ++++la  ++ ++++s++ Dgt+++WD+ 
   Q: 1700 HVDgPIWGLAThPSrDFFLSAAEDGTVRLWDIA 1732
           5553699999898889***************75 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkg 92
           h++ i c++++p k+++atg  +rd +i vwd++t k l+ l   h+ ++ av+fs dgk l++++ D  +ti +wd ++g+ +++ +g
   Q: 726  HDDDILCLAIHPLKDYVATGqvGRDPSIHVWDTETIKPLSILkGYHQYGICAVDFSADGKRLASVGIDdsHTIVLWDWKKGEKLSVARG 814
           4555566************95569******************5559******************99999******************** PP
   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqclee....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
            +d++  ++++p+  dkl++++  +  + w    g  +         g++++ +c+v+  ++ + +sG+  + v +W  +  +l++t +
   Q: 815  SKDKIFVVKMNPYVpDKLITAG-IKHMKFWRRAGGGLIGRkgyvGTLGKNDTMMCAVYGWTEEMAFSGTSTGDVCIW--RDVFLVKTVK 900
           ************9978888887.9999***88877777768998455677799************************..889******9 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
             h+++v s+   +  k +v+g++dg v lwd + ++c++t+  
   Q: 901  A-HDGPVFSMHALE--KGFVTGGKDGVVALWDDSFERCLKTYAI 941
           8.********9888..67**********************9965 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAARSAPSCH LRLEWVYGYR GHQCRNNLYY TAAKEIVYFV AGVGVVYSPR EHRQKFYRGH 60
SDDIISLALH PERVLVATGQ VGKEPYICVW DSYTVQTVSV LKDVHTHGIA CLAFDLDGQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTGAGCGCC GCAGGTGACC CGGGCAGGGA GTCCGGTGCG CGGAGCCGGC TGAGAAGGAG 60
CAGGCTGGAG GCGGGTCCCC GTCCCCCCTC TTAGCTTGGT TGTCTCCTAG CCTAGGCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome

KEGG

rno:444982

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002225	Ailuropoda melanoleuca	95.34	0.00e+00	3787.00
IUUC-Apl-003360	Anas platyrhynchos	90.13	0.00e+00	3511.00
IUUC-Ame-011681	Astyanax mexicanus	84.56	0.00e+00	3475.00
IUUC-Bta-012838	Bos taurus	95.25	0.00e+00	3833.00
IUUC-Cja-019068	Callithrix jacchus	95.55	0.00e+00	3823.00
IUUC-Cfa-020531	Canis familiaris	95.19	0.00e+00	3851.00
IUUC-Cpo-022304	Cavia porcellus	92.74	0.00e+00	3618.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	34.37	5.00e-100	361.00
IUUC-Csa-023621	Chlorocebus sabaeus	94.88	0.00e+00	3480.00
IUUC-Cho-024944	Choloepus hoffmanni	75.49	0.00e+00	1461.00
IUUC-Dre-028772	Danio rerio	84.32	0.00e+00	3480.00
IUUC-Dno-030063	Dasypus novemcinctus	94.05	0.00e+00	3766.00
IUUC-Dor-030980	Dipodomys ordii	86.01	0.00e+00	1574.00
IUUC-Ete-032554	Echinops telfairi	93.20	0.00e+00	1054.00
IUUC-Eca-033909	Equus caballus	95.48	0.00e+00	3530.00
IUUC-Eeu-035180	Erinaceus europaeus	77.84	0.00e+00	1429.00
IUUC-Fal-037219	Ficedula albicollis	90.57	0.00e+00	3636.00
IUUC-Gmo-039146	Gadus morhua	80.23	0.00e+00	3282.00
IUUC-Gga-041095	Gallus gallus	90.24	0.00e+00	2621.00
IUUC-Gac-041341	Gasterosteus aculeatus	82.67	0.00e+00	3369.00
IUUC-Hsa-045997	Homo sapiens	95.90	0.00e+00	3835.00
IUUC-Lch-050306	Latimeria chalumnae	84.31	0.00e+00	3167.00
IUUC-Loc-052215	Lepisosteus oculatus	84.67	0.00e+00	3523.00
IUUC-Laf-054044	Loxodonta africana	94.14	0.00e+00	3793.00
IUUC-Mcc-054733	Macaca mulatta	96.00	0.00e+00	3835.00
IUUC-Mga-059666	Meleagris gallopavo	89.21	0.00e+00	3470.00
IUUC-Mmr-060995	Microcebus murinus	95.90	0.00e+00	3824.00
IUUC-Mdo-062482	Monodelphis domestica	92.26	0.00e+00	3731.00
IUUC-Mmu-063533	Mus musculus	98.48	0.00e+00	3867.00
IUUC-Mpu-066704	Mustela putorius furo	95.45	0.00e+00	3841.00
IUUC-Mlu-067592	Myotis lucifugus	94.99	0.00e+00	3798.00
IUUC-Nle-069911	Nomascus leucogenys	95.60	0.00e+00	3819.00
IUUC-Ont-071966	Oreochromis niloticus	84.30	0.00e+00	3479.00
IUUC-Ola-086738	Oryzias latipes	83.81	0.00e+00	3433.00
IUUC-Oga-088436	Otolemur garnettii	93.05	0.00e+00	3731.00
IUUC-Oar-090153	Ovis aries	94.73	0.00e+00	3680.00
IUUC-Ptr-091008	Pan troglodytes	95.60	0.00e+00	3811.00
IUUC-Pan-092404	Papio anubis	95.55	0.00e+00	3811.00
IUUC-Psi-093417	Pelodiscus sinensis	89.61	0.00e+00	3492.00
IUUC-Pfo-096073	Poecilia formosa	84.42	0.00e+00	3481.00
IUUC-Pab-097900	Pongo abelii	95.30	0.00e+00	3812.00
IUUC-Pva-102880	Pteropus vampyrus	91.06	0.00e+00	3471.00
IUUC-Sha-106974	Sarcophilus harrisii	92.43	0.00e+00	3724.00
IUUC-Ssc-116057	Sus scrofa	95.16	0.00e+00	3733.00
IUUC-Tru-118444	Takifugu rubripes	83.05	0.00e+00	3397.00
IUUC-Tsy-118941	Tarsius syrichta	83.77	0.00e+00	2797.00
IUUC-Tni-120683	Tetraodon nigroviridis	82.91	0.00e+00	3253.00
IUUC-Tbe-127467	Tupaia belangeri	86.57	0.00e+00	1807.00
IUUC-Ttr-129138	Tursiops truncatus	91.00	0.00e+00	3493.00
IUUC-Vpa-130083	Vicugna pacos	89.17	0.00e+00	3395.00
IUUC-Xtr-131835	Xenopus tropicalis	87.63	0.00e+00	3610.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence