iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090550

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03134220

Gene Name

RAB40A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000022128.3	ENSPTRT00000041204.3	ENSPTRP00000038064.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	2.00e-14	53.2	185	227

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 7    lrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLlyedy 52
           ++s++ SLq+LC+++I++c++ + +   dkLPLP+ L+++L+++++
   Q: 185  RPSKVLSLQDLCCRTIVSCTPVHLV---DKLPLPSTLRSHLKSFSM 227
           6899******************888...***************976 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSAPGSPDQA YDFLLKFLLV GDSDVGKSEI LESLQDGAAE SPYSHLGGID YKTTTILLDG 60
QRVKLKLWDT SGQGRFCTIF RSYSRGAQGV ILVYDIANRW SFEGMDRWIK KIDEHAPGVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAACATGG ATCCTCATGA TTTTATTTTC TAGATTGGCT GATAGGCTGA ATAATCTTCT 60
GTAGGGTAAG AAGTGTCAAC TGTATCAAGC ACATGGAGGT GGACTGGCTA CAGGAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR027417--P-loop_NTPase
IPR005225--Small_GTP-bd_dom
IPR001806--Small_GTPase
IPR001496--SOCS_box

PROSITE

PS50225--SOCS

Pfam

PF00071--Ras
PF07525--SOCS_box

SMART

SM00253--SOCS
SM00969--SOCS_box

Gene Ontology

GO:0005768--C:endosome
GO:0005886--C:plasma membrane
GO:0008021--C:synaptic vesicle
GO:0005525--F:GTP binding
GO:0072659--P:protein localization to plasma membrane
GO:0009306--P:protein secretion
GO:0016567--P:protein ubiquitination
GO:0007264--P:small GTPase mediated signal transduction
GO:0006904--P:vesicle docking involved in exocytosis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ggo-045498	Gorilla gorilla	98.19	2.00e-153	534.00
IUUC-Hsa-046125	Homo sapiens	99.28	7.00e-155	539.00
IUUC-Nle-069301	Nomascus leucogenys	96.75	3.00e-151	527.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence