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Tag Content
iUUCD ID IUUC-Ola-086921
Ensembl Protein ID ENSORLP00000003574.1
UniProt Accession H2LCD8; H2LCD8_ORYLA
Genbank Protein ID ENSORLP00000003574
Protein Name Coatomer subunit alpha
Genbank Nucleotide ID BAAF04033414
Gene Name copa
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000002857.1 ENSORLT00000003570.1 ENSORLP00000003569.1
ENSORLG00000002857.1 ENSORLT00000003575.1 ENSORLP00000003574.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.70e-34 116.7 50 80
UBD/Beta-Prp 1.00e-74 251.7 3 324
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H ++v++++f  + +l+vsG+dD +ikvW++
   Q: 50   HDGPVRGIDFhkQQPLFVSGGDDYKIKVWNY 80
           99********97449**************96 PP
   

   UBD/Beta-Prp
   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           t +++++++++ + f+p++++++++  +g i++wd+++ +l+ ++ +h+++v+ ++f+++++++v+g++D+ ikvw+++ + c+ tl g
   Q: 3    TKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYKIKVWNYKLRRCLFTLLG 91
           67889999********************************************************************************* PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl............... 166
           h d+++++ f+ +  +++s+s+d+tir+w++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+               
   Q: 92   HLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCVC-VLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIsglrkknlspgavet 179
           **************************************.************************************************** PP
   S: 167  ............ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgs 241
                       +++ ++++  +gh++ v++ +f+++++ +vsg++d++vk+w + +++   ++t++gh +nv++  f+p++e+++s s
   Q: 180  dvrgisgvdlfgASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAweLDTCRGHYNNVSCAVFHPRQELILSNS 268
           ************888888877777********************************8888789************************** PP
   S: 242  sDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           +D+sir+Wd+ +++ ++t+ + +++++   + +++ n +++g  ds   ++kl++++p
   Q: 269  EDKSIRVWDMSKRTGVQTFRRDHDRFWVLGA-HPNLNLFAAG-HDSGMIVFKLERERP 324
           ***************************9999.5544444433.589999999988765 PP
   
Organism Oryzias latipes
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
Protein Sequence
(Fasta)
MLTKFETKSA RVKGLSFHPK RPWVLASLHN GVIQLWDYRM CTLIDKFDEH DGPVRGIDFH 60
KQQPLFVSGG DDYKIKVWNY KLRRCLFTLL GHLDYIRTTF FHHEYPWILS ASDDQTIRIW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ola-086921|E3,WD_repeat;UBD,Beta-Prp|Oryzias latipes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTTAACAA AGTTTGAAAC GAAGTCGGCC CGTGTTAAAG GTAAGCTAAC CGCAGCTAGC 60
TACATCATGC TAAAGTTAGT CGGTTGACGT TACTTTATCA TATGCTCATA CTATTAATGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ola-086921|E3,WD_repeat;UBD,Beta-Prp|Oryzias latipes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0030903--P:notochord development
GO:0061053--P:somite development
GO:0016192--P:vesicle-mediated transport
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000064 Aegilops tauschii 53.22 0.00e+00 1308.00
IUUC-Aml-001758 Ailuropoda melanoleuca 87.29 0.00e+00 2273.00
IUUC-Atr-002493 Amborella trichopoda 54.47 0.00e+00 1316.00
IUUC-Apl-003385 Anas platyrhynchos 84.16 0.00e+00 1869.00
IUUC-Aca-005154 Anolis carolinensis 93.72 5.00e-119 419.00
IUUC-Aly-006020 Arabidopsis lyrata 60.56 0.00e+00 1075.00
IUUC-Ath-007058 Arabidopsis thaliana 52.76 0.00e+00 1290.00
IUUC-Ago-007992 Ashbya gossypii 44.44 0.00e+00 1033.00
IUUC-Acl-008027 Aspergillus clavatus 55.82 0.00e+00 993.00
IUUC-Afl-008644 Aspergillus flavus 56.01 0.00e+00 988.00
IUUC-Afu-008964 Aspergillus fumigatus 48.79 0.00e+00 1186.00
IUUC-Ani-009379 Aspergillus nidulans 55.52 0.00e+00 1002.00
IUUC-Ang-009756 Aspergillus niger 48.99 0.00e+00 1192.00
IUUC-Aor-010174 Aspergillus oryzae 56.01 0.00e+00 988.00
IUUC-Ate-010302 Aspergillus terreus 48.11 0.00e+00 1202.00
IUUC-Ame-011229 Astyanax mexicanus 91.74 0.00e+00 2308.00
IUUC-Bgr-012300 Blumeria graminis 47.22 0.00e+00 1126.00
IUUC-Bta-012524 Bos taurus 87.13 0.00e+00 2247.00
IUUC-Bci-013781 Botrytis cinerea 48.15 0.00e+00 1188.00
IUUC-Bdi-014549 Brachypodium distachyon 53.49 0.00e+00 1323.00
IUUC-Bol-015925 Brassica oleracea 60.40 0.00e+00 1057.00
IUUC-Bra-016978 Brassica rapa 52.17 0.00e+00 1254.00
IUUC-Cel-018115 Caenorhabditis elegans 61.34 0.00e+00 1110.00
IUUC-Cja-019107 Callithrix jacchus 84.78 0.00e+00 2201.00
IUUC-Cfa-020675 Canis familiaris 86.27 0.00e+00 2220.00
IUUC-Cpo-021813 Cavia porcellus 86.80 0.00e+00 2259.00
IUUC-Cre-022969 Chlamydomonas reinhardtii 63.41 0.00e+00 1092.00
IUUC-Csa-023523 Chlorocebus sabaeus 86.88 0.00e+00 2268.00
IUUC-Cho-024704 Choloepus hoffmanni 74.46 0.00e+00 1729.00
IUUC-Cin-025572 Ciona intestinalis 71.36 0.00e+00 1849.00
IUUC-Csv-025864 Ciona savignyi 74.50 0.00e+00 1291.00
IUUC-Cgl-026510 Colletotrichum gloeosporioides 56.47 0.00e+00 1011.00
IUUC-Cne-027053 Cryptococcus neoformans 51.03 0.00e+00 1218.00
IUUC-Cme-027222 Cyanidioschyzon merolae 39.11 2.00e-140 494.00
IUUC-Dre-027421 Danio rerio 91.82 0.00e+00 2328.00
IUUC-Dno-029303 Dasypus novemcinctus 86.60 0.00e+00 2252.00
IUUC-Dor-030290 Dipodomys ordii 80.53 0.00e+00 946.00
IUUC-Dse-031543 Dothistroma septosporum 45.87 0.00e+00 1106.00
IUUC-Dme-031945 Drosophila melanogaster 75.39 0.00e+00 1280.00
IUUC-Ete-032873 Echinops telfairi 82.97 0.00e+00 1978.00
IUUC-Eca-033773 Equus caballus 84.94 0.00e+00 2196.00
IUUC-Eeu-034874 Erinaceus europaeus 73.97 0.00e+00 1329.00
IUUC-Fca-035739 Felis catus 86.93 0.00e+00 2203.00
IUUC-Fal-037263 Ficedula albicollis 80.24 0.00e+00 1990.00
IUUC-Fox-037738 Fusarium oxysporum 48.32 0.00e+00 1192.00
IUUC-Fso-038153 Fusarium solani 48.59 0.00e+00 1193.00
IUUC-Gmo-039602 Gadus morhua 88.76 0.00e+00 2180.00
IUUC-Ggr-039931 Gaeumannomyces graminis 56.10 0.00e+00 1009.00
IUUC-Gga-040590 Gallus gallus 86.15 0.00e+00 2227.00
IUUC-Gac-041318 Gasterosteus aculeatus 94.07 0.00e+00 2372.00
IUUC-Gma-043894 Glycine max 53.90 0.00e+00 1337.00
IUUC-Ggo-045029 Gorilla gorilla 87.13 0.00e+00 2278.00
IUUC-Hsa-046078 Homo sapiens 87.13 0.00e+00 2278.00
IUUC-Hvu-047556 Hordeum vulgare 53.53 0.00e+00 1342.00
IUUC-Itr-048881 Ictidomys tridecemlineatus 83.20 0.00e+00 1532.00
IUUC-Kpa-049256 Komagataella pastoris 44.80 0.00e+00 1078.00
IUUC-Lch-049706 Latimeria chalumnae 86.07 0.00e+00 2208.00
IUUC-Lpe-051316 Leersia perrieri 53.46 0.00e+00 1306.00
IUUC-Loc-051867 Lepisosteus oculatus 71.73 0.00e+00 1235.00
IUUC-Lma-053138 Leptosphaeria maculans 56.10 0.00e+00 1007.00
IUUC-Laf-053510 Loxodonta africana 86.94 0.00e+00 2266.00
IUUC-Mcc-055836 Macaca mulatta 86.72 0.00e+00 2261.00
IUUC-Meu-056238 Macropus eugenii 82.69 0.00e+00 1142.00
IUUC-Mor-057172 Magnaporthe oryzae 48.20 0.00e+00 1177.00
IUUC-Mpo-057300 Magnaporthe poae 48.41 0.00e+00 1174.00
IUUC-Mtr-058248 Medicago truncatula 53.99 0.00e+00 1351.00
IUUC-Mla-059019 Melampsora laricipopulina 51.09 0.00e+00 1263.00
IUUC-Mga-059499 Meleagris gallopavo 86.10 0.00e+00 2222.00
IUUC-Mvi-060336 Microbotryum violaceum 52.29 0.00e+00 1255.00
IUUC-Mmr-061102 Microcebus murinus 87.37 0.00e+00 2246.00
IUUC-Mdo-062594 Monodelphis domestica 86.88 0.00e+00 2285.00
IUUC-Mmu-063736 Mus musculus 87.04 0.00e+00 2267.00
IUUC-Mac-065398 Musa acuminata 50.97 0.00e+00 1222.00
IUUC-Mpu-066701 Mustela putorius furo 86.44 0.00e+00 2234.00
IUUC-Mlu-067392 Myotis lucifugus 86.00 0.00e+00 2234.00
IUUC-Nfi-068270 Neosartorya fischeri 56.47 0.00e+00 995.00
IUUC-Ncr-068892 Neurospora crassa 48.20 0.00e+00 1167.00
IUUC-Nle-069634 Nomascus leucogenys 92.10 0.00e+00 1316.00
IUUC-Opr-070952 Ochotona princeps 74.74 0.00e+00 1605.00
IUUC-Ont-072488 Oreochromis niloticus 94.89 0.00e+00 2361.00
IUUC-Oan-073184 Ornithorhynchus anatinus 44.22 3.00e-68 250.00
IUUC-Ocu-074211 Oryctolagus cuniculus 86.96 0.00e+00 2263.00
IUUC-Oba-075761 Oryza barthii 60.76 0.00e+00 1078.00
IUUC-Obr-076429 Oryza brachyantha 61.12 0.00e+00 1076.00
IUUC-Ogl-077364 Oryza glaberrima 60.76 0.00e+00 1079.00
IUUC-Ogu-078257 Oryza glumaepatula 60.76 0.00e+00 1077.00
IUUC-Oin-080029 Oryza indica 60.99 0.00e+00 1077.00
IUUC-Olo-080466 Oryza longistaminata 61.24 0.00e+00 1071.00
IUUC-Ome-081993 Oryza meridionalis 63.19 0.00e+00 1011.00
IUUC-Oni-082874 Oryza nivara 60.76 0.00e+00 1078.00
IUUC-Opu-083370 Oryza punctata 53.21 0.00e+00 1302.00
IUUC-Oru-084274 Oryza rufipogon 60.76 0.00e+00 1078.00
IUUC-Osa-085565 Oryza sativa 60.76 0.00e+00 1078.00
IUUC-Olu-087639 Ostreococcus lucimarinus 54.93 0.00e+00 1341.00
IUUC-Oga-087991 Otolemur garnettii 81.92 0.00e+00 2123.00
IUUC-Oar-089590 Ovis aries 87.13 0.00e+00 2267.00
IUUC-Ptr-090808 Pan troglodytes 87.21 0.00e+00 2280.00
IUUC-Pan-092475 Papio anubis 86.49 0.00e+00 2254.00
IUUC-Psi-093044 Pelodiscus sinensis 73.24 0.00e+00 1585.00
IUUC-Pno-094839 Phaeosphaeria nodorum 46.89 0.00e+00 1089.00
IUUC-Ppa-095254 Physcomitrella patens 55.51 0.00e+00 1379.00
IUUC-Pfo-097493 Poecilia formosa 95.86 0.00e+00 2336.00
IUUC-Pab-098497 Pongo abelii 86.96 0.00e+00 2269.00
IUUC-Pop-099992 Populus trichocarpa 55.70 0.00e+00 1327.00
IUUC-Pca-100413 Procavia capensis 83.73 0.00e+00 973.00
IUUC-Ppe-101899 Prunus persica 54.30 0.00e+00 1321.00
IUUC-Pva-102126 Pteropus vampyrus 83.81 0.00e+00 2164.00
IUUC-Pgr-103376 Puccinia graminis 52.44 0.00e+00 1284.00
IUUC-Ptt-103978 Puccinia triticina 46.68 0.00e+00 1066.00
IUUC-Pte-104126 Pyrenophora teres 54.88 0.00e+00 967.00
IUUC-Pyt-104778 Pyrenophora triticirepentis 45.50 2.00e-176 613.00
IUUC-Rno-105428 Rattus norvegicus 86.88 0.00e+00 2259.00
IUUC-Sce-106464 Saccharomyces cerevisiae 43.42 0.00e+00 1001.00
IUUC-Sha-107301 Sarcophilus harrisii 86.74 0.00e+00 2233.00
IUUC-Sja-107961 Schizosaccharomyces japonicus 45.35 0.00e+00 1077.00
IUUC-Spo-108217 Schizosaccharomyces pombe 46.73 0.00e+00 1123.00
IUUC-Ssl-108643 Sclerotinia sclerotiorum 48.15 0.00e+00 1187.00
IUUC-Smo-109582 Selaginella moellendorffii 63.36 0.00e+00 1135.00
IUUC-Sit-109697 Setaria italica 60.76 0.00e+00 1072.00
IUUC-Sly-111447 Solanum lycopersicum 53.75 0.00e+00 1353.00
IUUC-Stu-112564 Solanum tuberosum 53.96 0.00e+00 1351.00
IUUC-Sar-113313 Sorex araneus 76.46 0.00e+00 1315.00
IUUC-Sbi-114388 Sorghum bicolor 52.98 0.00e+00 1320.00
IUUC-Sre-115209 Sporisorium reilianum 57.26 0.00e+00 1036.00
IUUC-Ssc-115933 Sus scrofa 87.04 0.00e+00 2262.00
IUUC-Tgu-117109 Taeniopygia guttata 71.68 0.00e+00 683.00
IUUC-Tru-117772 Takifugu rubripes 93.70 0.00e+00 2313.00
IUUC-Tsy-119105 Tarsius syrichta 75.22 0.00e+00 1921.00
IUUC-Tni-120556 Tetraodon nigroviridis 77.23 0.00e+00 1636.00
IUUC-Tca-120918 Theobroma cacao 62.78 0.00e+00 1101.00
IUUC-Tre-121951 Trichoderma reesei 48.27 0.00e+00 1166.00
IUUC-Tvi-122359 Trichoderma virens 48.21 0.00e+00 1184.00
IUUC-Tae-125527 Triticum aestivum 53.01 0.00e+00 1308.00
IUUC-Tur-126754 Triticum urartu 60.76 0.00e+00 1077.00
IUUC-Tme-127170 Tuber melanosporum 50.40 0.00e+00 1228.00
IUUC-Tbe-127882 Tupaia belangeri 67.90 0.00e+00 774.00
IUUC-Ttr-128217 Tursiops truncatus 85.02 0.00e+00 2199.00
IUUC-Uma-129337 Ustilago maydis 57.72 0.00e+00 1038.00
IUUC-Vda-129828 Verticillium dahliae 47.63 0.00e+00 1162.00
IUUC-Vpa-130537 Vicugna pacos 86.88 0.00e+00 2233.00
IUUC-Vvi-130958 Vitis vinifera 62.43 0.00e+00 1093.00
IUUC-Xtr-132857 Xenopus tropicalis 82.60 0.00e+00 2129.00
IUUC-Xma-133138 Xiphophorus maculatus 95.62 0.00e+00 2330.00
IUUC-Yli-134399 Yarrowia lipolytica 50.69 0.00e+00 863.00
IUUC-Zma-135612 Zea mays 52.96 0.00e+00 1322.00
Created Date 25-Jun-2017

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