iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099623

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 6 family protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s20410g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s20410	POPTR_0001s20410.1	POPTR_0001s20410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.30e-51	176.9	1	388

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 12   mNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.....gyeqqDaqEfla 97
           mNS++QcL+++pel+++l +  ++k ++   ++++  l+ + ++lf+el +++ k v+p +++ +l+k+ ++f       y+qqDa+E+++
   Q: 1    MNSTVQCLHSVPELKSALVSYPSQKSSDL--DHTSHMLTAATRELFNEL-DKSVKPVAPMQFWMVLRKKYPQFGqlhngLYMQQDAEECWT 88
           9*******************555555554..68999*************.99999******************9999999*********** PP
   S: 98   flldqleeelkk..eknkpkeeeeeedkselsde....aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           +ll +l+++l +   +  p+ e+ + +  + s+             n+++i+ lF+++l s++ c+e +++ss++e+ ++l+++++++ + 
   Q: 89   QLLYTLSQSLGSpsFSIIPYIELIGLNIVAYSECllsvWILTFLILNPDTIKALFGIELVSRVHCQESGEESSETESVYSLKCHISQEVN- 178
           **********55444445555555555444444366532234455677**************************************9997. PP
   S: 183  kkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts...... 267
               l++ L++  k e le+     ++   ++    k+ +++ lP++L++++ Rf +++e +++ ki +kv++pl+Ld+  fc++      
   Q: 179  ---HLHEGLKHGLKSE-LEK----ASPCLGRSAIYLKESRINALPRYLTVQFVRFFWKRESNQKAKILRKVDYPLQLDVYDFCSDdlckkl 261
           ...5777777766655.553....2333444555799************************************************999999 PP
   S: 268  ....................................................peekqke.....kkkYeLiavvvHsG.slssGHYvayvk 300
                                                               +     +     + +Y+L+av+ H+G s++sGHYva+vk
   Q: 262  eaprqilrdeegkkaglkakektsgskdndvkmtdverpsnesgesskptskE-----DkkshlTGIYDLVAVLTHKGrSADSGHYVAWVK 347
           99999999888888888888877777777777777777666666665554443.....055566*************************** PP
   S: 301  nekgkWllfdDskVtevkeeevleetg....staYvlfYkr 337
           +e+gkW++fdD++  + +ee++ + +g    + aY+++Yk 
   Q: 348  QESGKWIEFDDDNPVPQREEDITKLSGggdwHMAYICMYKA 388
           ************************888************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNSTVQCLHS VPELKSALVS YPSQKSSDLD HTSHMLTAAT RELFNELDKS VKPVAPMQFW 60
MVLRKKYPQF GQLHNGLYMQ QDAEECWTQL LYTLSQSLGS PSFSIIPYIE LIGLNIVAYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTCACACTG CTGGCCTCTT TAATCTAGGG AACACTTGCT ACATGAACTC AACAGTACAA 60
TGCCTGCATT CTGTTCCAGA GTTGAAGTCT GCTTTAGTCA GGTGAGTTCT CTTTGTGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s20410g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Nle-069741	Nomascus leucogenys	42.44	3.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence