iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s13600	POPTR_0003s13600.2	POPTR_0003s13600.2
POPTR_0003s13600	POPTR_0003s13600.1	POPTR_0003s13600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.50e-56	191.1	5	139
UBD/UBC-like/UBD_UBC	1.30e-74	250.0	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPADSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--EQ 92
           899*********************.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 93   WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 139
           *******************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsa 91
           ri kelkdl++d+++ +sa++v +d+f+++ati+gp dspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws+
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSP 95
           899**************************************************************************************** PP
   S: 92   altlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           alt+skvlls+csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 96   ALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWT 142
           **********************************************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP ADSPYAGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTCACACT AACAATAATA ACACCACCTA ATTACTCTCT CTGGTCTTAC AGAACTGTTC 60
TGTCCTTTCA TCAGATTTCC CTCTCTCCCT TTTCATTTTC CCCATCTCAA AGAATCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

pop:POPTR_0003s13600g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001778	Ailuropoda melanoleuca	80.99	2.00e-68	250.00
IUUC-Apl-004043	Anas platyrhynchos	79.58	8.00e-68	248.00
IUUC-Aly-006364	Arabidopsis lyrata	96.62	1.00e-84	304.00
IUUC-Ame-011566	Astyanax mexicanus	79.59	6.00e-71	258.00
IUUC-Bgr-012238	Blumeria graminis	78.91	2.00e-70	256.00
IUUC-Cpo-021714	Cavia porcellus	79.59	5.00e-69	252.00
IUUC-Csa-023377	Chlorocebus sabaeus	79.02	5.00e-68	249.00
IUUC-Dre-028686	Danio rerio	81.63	2.00e-71	260.00
IUUC-Dor-030323	Dipodomys ordii	80.27	2.00e-70	257.00
IUUC-Fal-036904	Ficedula albicollis	80.71	1.00e-67	247.00
IUUC-Opr-070191	Ochotona princeps	80.58	5.00e-67	245.00
IUUC-Ont-072562	Oreochromis niloticus	80.95	4.00e-71	259.00
IUUC-Oan-073026	Ornithorhynchus anatinus	80.71	6.00e-68	249.00
IUUC-Pab-098760	Pongo abelii	80.27	2.00e-70	257.00
IUUC-Ppe-101688	Prunus persica	98.65	3.00e-85	306.00
IUUC-Sit-109936	Setaria italica	95.95	3.00e-84	303.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence