iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006260

Ensembl Protein ID

fgenesh2_kg.6__831__AT5G08560.1

UniProt Accession

D7M1F6; D7M1F6_ARALL

Genbank Protein ID

EFH49631.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_487697

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__831__AT5G08560.1	fgenesh2_kg.6__831__AT5G08560.1	fgenesh2_kg.6__831__AT5G08560.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-27	94.6	528	561
UBD/Beta-Prp	1.70e-48	166.0	397	563

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH++ v+c+++  ++ ++l+s+sdDgti++W l+
   Q: 528  GHAGAVNCVSWspTNlHMLASASDDGTIRIWGLD 561
           8***********766999*************986 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls 82
            kg++++ ++++++++d+++l++ ++d+ i ++d +   ++++l + e+ +t+ ++s+d k+++     + i++w+++
   Q: 397  WKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLHNQEIRLWNIE 472
           678899999*************************999..899*******************99999999********* PP
   S: 83   .tgkcvhtlkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsG 155
            ++k+v+ +kgh++s   ++++    ++ +++sGs+d+ + +w+ +tg+ +   l gh g+vncv+++p++  +l+s+
   Q: 473  gDPKIVSRYKGHKRSRFIIRSCFggyKQAFVASGSEDSQVYIWHRSTGKLIV-ELPGHAGAVNCVSWSPTNlHMLASA 549
           999***********9888888877746699**********************.************************* PP
   S: 156  slDrtvrlWdlktgkl 171
           s+D+t+r+W l  +++
   Q: 550  SDDGTIRIWGL--DRI 563
           *********87..333 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGVVEDTEPP LKRAKRLTDE QNGFSGNSSL RGTSVNNSLG DLMARPLTSQ GDDETIGSKG 60
VIKKSEFIRI ITRALYSLGY DKTGAMLEEE SGISLHNSTI KLFLQQVKDG KWDQSVKTLY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCCCTTTG CTTCTTCTAT TGCCTTGTTA TAATAGTATT TGTTTTCCTC TTCTGGCTTC 60
CTCTCTCTCT CTCCTTTTCC ATCTTCTTTT CCAGAACTTG CTCCCTCTAT CATCTTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0009737--P:response to abscisic acid
GO:0009733--P:response to auxin
GO:0009723--P:response to ethylene
GO:0009416--P:response to light stimulus
GO:0006970--P:response to osmotic stress

KEGG

aly:ARALYDRAFT_487697

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	59.28	0.00e+00	678.00
IUUC-Atr-002649	Amborella trichopoda	58.88	0.00e+00	721.00
IUUC-Ath-007549	Arabidopsis thaliana	94.91	0.00e+00	1066.00
IUUC-Ago-007896	Ashbya gossypii	23.00	2.00e-41	163.00
IUUC-Acl-008259	Aspergillus clavatus	33.76	1.00e-84	306.00
IUUC-Afl-008669	Aspergillus flavus	31.41	4.00e-82	298.00
IUUC-Ani-009455	Aspergillus nidulans	29.06	4.00e-67	249.00
IUUC-Ang-009832	Aspergillus niger	31.85	6.00e-73	268.00
IUUC-Aor-010221	Aspergillus oryzae	32.37	2.00e-85	309.00
IUUC-Ate-010262	Aspergillus terreus	33.15	7.00e-85	307.00
IUUC-Bgr-012047	Blumeria graminis	33.33	5.00e-73	268.00
IUUC-Bci-013589	Botrytis cinerea	32.88	8.00e-75	273.00
IUUC-Bdi-014338	Brachypodium distachyon	57.96	0.00e+00	697.00
IUUC-Bol-015143	Brassica oleracea	87.12	0.00e+00	1003.00
IUUC-Bra-017245	Brassica rapa	83.56	0.00e+00	970.00
IUUC-Csa-023815	Chlorocebus sabaeus	35.82	1.00e-62	233.00
IUUC-Csv-026251	Ciona savignyi	37.33	2.00e-80	292.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	29.76	2.00e-68	252.00
IUUC-Cne-026805	Cryptococcus neoformans	26.49	8.00e-32	131.00
IUUC-Cme-027218	Cyanidioschyzon merolae	27.26	1.00e-62	233.00
IUUC-Dre-027404	Danio rerio	37.28	8.00e-80	290.00
IUUC-Dse-031569	Dothistroma septosporum	28.74	5.00e-67	248.00
IUUC-Fox-037720	Fusarium oxysporum	30.86	1.00e-68	253.00
IUUC-Fso-038206	Fusarium solani	30.43	5.00e-68	251.00
IUUC-Ggr-039738	Gaeumannomyces graminis	33.46	4.00e-76	278.00
IUUC-Gma-044009	Glycine max	62.80	0.00e+00	731.00
IUUC-Hvu-047610	Hordeum vulgare	57.98	0.00e+00	703.00
IUUC-Kpa-049141	Komagataella pastoris	27.12	5.00e-56	211.00
IUUC-Lpe-050963	Leersia perrieri	58.42	0.00e+00	724.00
IUUC-Loc-052708	Lepisosteus oculatus	37.22	1.00e-83	303.00
IUUC-Lma-053156	Leptosphaeria maculans	33.90	1.00e-78	286.00
IUUC-Mor-056939	Magnaporthe oryzae	34.94	5.00e-84	304.00
IUUC-Mpo-057600	Magnaporthe poae	33.33	6.00e-75	275.00
IUUC-Mtr-058261	Medicago truncatula	59.80	0.00e+00	693.00
IUUC-Mla-058912	Melampsora laricipopulina	37.01	2.00e-77	282.00
IUUC-Mvi-060274	Microbotryum violaceum	35.28	4.00e-88	318.00
IUUC-Mac-065563	Musa acuminata	61.28	0.00e+00	751.00
IUUC-Nfi-068498	Neosartorya fischeri	34.15	5.00e-84	304.00
IUUC-Ncr-068832	Neurospora crassa	30.46	1.00e-64	240.00
IUUC-Oan-073045	Ornithorhynchus anatinus	34.34	4.00e-73	268.00
IUUC-Oba-075071	Oryza barthii	59.26	0.00e+00	733.00
IUUC-Obr-076614	Oryza brachyantha	58.49	0.00e+00	712.00
IUUC-Ogl-076963	Oryza glaberrima	61.23	0.00e+00	717.00
IUUC-Ogu-078436	Oryza glumaepatula	61.23	0.00e+00	717.00
IUUC-Oin-080021	Oryza indica	61.05	0.00e+00	716.00
IUUC-Olo-080298	Oryza longistaminata	61.05	0.00e+00	716.00
IUUC-Ome-081202	Oryza meridionalis	59.09	0.00e+00	729.00
IUUC-Oni-082604	Oryza nivara	59.09	0.00e+00	730.00
IUUC-Opu-083763	Oryza punctata	59.26	0.00e+00	732.00
IUUC-Oru-084243	Oryza rufipogon	59.09	0.00e+00	730.00
IUUC-Osa-086153	Oryza sativa	58.87	0.00e+00	629.00
IUUC-Pan-092573	Papio anubis	35.08	6.00e-40	157.00
IUUC-Pno-094912	Phaeosphaeria nodorum	32.84	2.00e-77	283.00
IUUC-Ppa-095307	Physcomitrella patens	48.63	7.00e-155	540.00
IUUC-Pop-099989	Populus trichocarpa	61.60	0.00e+00	741.00
IUUC-Ppe-101227	Prunus persica	65.87	0.00e+00	808.00
IUUC-Ptt-103705	Puccinia triticina	27.73	9.00e-38	151.00
IUUC-Pte-104023	Pyrenophora teres	33.95	2.00e-75	276.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	32.59	1.00e-73	271.00
IUUC-Sce-106152	Saccharomyces cerevisiae	36.29	2.00e-18	87.40
IUUC-Sja-107894	Schizosaccharomyces japonicus	35.76	6.00e-82	297.00
IUUC-Spo-108235	Schizosaccharomyces pombe	35.39	2.00e-81	296.00
IUUC-Smo-109054	Selaginella moellendorffii	49.53	9.00e-159	552.00
IUUC-Sit-110575	Setaria italica	57.57	0.00e+00	705.00
IUUC-Sly-111167	Solanum lycopersicum	59.73	0.00e+00	660.00
IUUC-Stu-112726	Solanum tuberosum	57.51	0.00e+00	682.00
IUUC-Sbi-114344	Sorghum bicolor	57.40	0.00e+00	703.00
IUUC-Tni-119720	Tetraodon nigroviridis	34.10	3.00e-81	295.00
IUUC-Tca-121103	Theobroma cacao	69.11	0.00e+00	829.00
IUUC-Tre-122234	Trichoderma reesei	31.42	4.00e-69	255.00
IUUC-Tae-125720	Triticum aestivum	57.79	0.00e+00	696.00
IUUC-Tur-126726	Triticum urartu	54.84	0.00e+00	673.00
IUUC-Tme-126972	Tuber melanosporum	38.20	4.00e-96	345.00
IUUC-Uma-129354	Ustilago maydis	31.13	6.00e-34	138.00
IUUC-Vda-129770	Verticillium dahliae	33.14	2.00e-70	259.00
IUUC-Vvi-130991	Vitis vinifera	62.48	0.00e+00	733.00
IUUC-Yli-134521	Yarrowia lipolytica	35.35	1.00e-75	276.00
IUUC-Zma-135772	Zea mays	58.76	0.00e+00	669.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence