iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004193

Ensembl Protein ID

ENSAPLP00000011184.1

UniProt Accession

U3IVB1; U3IVB1_ANAPL

Genbank Protein ID

ENSAPLP00000011184

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01118558

Gene Name

TAF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000011406.1	ENSAPLT00000011907.1	ENSAPLP00000011184.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-47	157.5	451	489
UBD/Beta-Prp	3.70e-87	292.0	299	620

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++vtc +f ++ +++++Gs D t+++WD+  g++++
   Q: 451  GHLADVTCTRFhPNsNYIATGSADRTVRLWDVLNGNCVR 489
           89**********777*****************9999986 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+s+++ g++d+t++vw+vt++kl                               l+ l+gh+++v+ ++fspd+++l+++
   Q: 299  LTAVDITDDSSMIVGGFADSTVRVWSVTPKKLrsvkaaadlslidkesddvlerimdektaseLKILYGHSGPVYGTSFSPDRNYLLSC 387
           7999************************************************************************************* PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+t+++w+l+t++c++ +kgh++ v++++fsp+g+++vsG+hdr++r+w ++++q l+ +++gh + v+c+++hp++n++++Gs+Dr
   Q: 388  SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYIATGSADR 475
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           tvrlWd+ +g+++r +tg h+++++sl+f++ng++l++g++dg+v lwd+ +g +v +l+ghtd+++ +rfs+++e+l+sgs+D+++r+
   Q: 476  TVRLWDVLNGNCVRIFTG-HKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRL 563
           *****************9.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           W       dl+++d+++++ + n              +++++v +l+f++++l+l++
   Q: 564  WdavkafeDLETDDFTTATGHINlpensqdlllgtymTKSTPVVHLHFTRRNLLLAA 620
           *************************************************99998875 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

RRSYKLLLNA FAVGGGVVED QPDVSAVLSA YNQQGDPTLY EEYYSGLKNF IECSLDCHRA 60
ELSQLFYPLF VHMYLELVYN QHESEAKSFF EXXXXXXXXX XXXDLRVLSS LTKKEHMKGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCGGTCTT ACAAGCTGTT GTTAAACGCT TTTGCAGTTG GAGGAGGTGT TGTGGAAGAT 60
CAGCCAGATG TGAGCGCAGT ATTATCCGCC TACAATCAGC AGGGGGACCC CACGCTGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0000790--C:nuclear chromatin
GO:0005669--C:transcription factor TFIID complex
GO:0033276--C:transcription factor TFTC complex
GO:0004402--F:histone acetyltransferase activity
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	52.36	3.00e-69	255.00
IUUC-Aml-001607	Ailuropoda melanoleuca	92.99	0.00e+00	1131.00
IUUC-Atr-003136	Amborella trichopoda	47.56	5.00e-96	344.00
IUUC-Aca-004522	Anolis carolinensis	91.97	0.00e+00	1130.00
IUUC-Aly-006476	Arabidopsis lyrata	37.66	2.00e-111	396.00
IUUC-Ath-006587	Arabidopsis thaliana	36.89	2.00e-106	379.00
IUUC-Ago-007736	Ashbya gossypii	42.32	2.00e-93	336.00
IUUC-Acl-008092	Aspergillus clavatus	37.21	1.00e-77	284.00
IUUC-Afl-008659	Aspergillus flavus	31.08	9.00e-88	317.00
IUUC-Afu-008902	Aspergillus fumigatus	37.67	7.00e-79	288.00
IUUC-Ani-009462	Aspergillus nidulans	38.11	1.00e-79	290.00
IUUC-Aor-010083	Aspergillus oryzae	31.08	9.00e-88	317.00
IUUC-Ate-010271	Aspergillus terreus	37.24	8.00e-79	288.00
IUUC-Ame-010721	Astyanax mexicanus	85.41	0.00e+00	1061.00
IUUC-Bgr-012257	Blumeria graminis	29.59	5.00e-73	268.00
IUUC-Bta-013539	Bos taurus	92.67	0.00e+00	1130.00
IUUC-Bci-013737	Botrytis cinerea	28.01	2.00e-75	276.00
IUUC-Bdi-015041	Brachypodium distachyon	48.34	5.00e-84	305.00
IUUC-Bol-016198	Brassica oleracea	36.32	3.00e-107	382.00
IUUC-Bra-017660	Brassica rapa	35.98	4.00e-107	382.00
IUUC-Cel-018451	Caenorhabditis elegans	33.05	9.00e-84	304.00
IUUC-Cja-018881	Callithrix jacchus	92.67	0.00e+00	1130.00
IUUC-Cfa-020056	Canis familiaris	93.00	0.00e+00	1133.00
IUUC-Cpo-021454	Cavia porcellus	88.78	0.00e+00	1136.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	39.74	2.00e-52	199.00
IUUC-Csa-023045	Chlorocebus sabaeus	92.86	0.00e+00	1080.00
IUUC-Cho-024284	Choloepus hoffmanni	79.85	0.00e+00	862.00
IUUC-Cin-025457	Ciona intestinalis	60.22	2.00e-100	357.00
IUUC-Csv-025882	Ciona savignyi	50.31	3.00e-174	604.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.34	1.00e-73	270.00
IUUC-Cne-026876	Cryptococcus neoformans	38.20	6.00e-71	261.00
IUUC-Cme-027302	Cyanidioschyzon merolae	33.95	8.00e-99	354.00
IUUC-Dre-027980	Danio rerio	84.70	0.00e+00	1036.00
IUUC-Dno-028863	Dasypus novemcinctus	92.67	0.00e+00	1129.00
IUUC-Dor-030561	Dipodomys ordii	93.09	0.00e+00	1125.00
IUUC-Dse-031547	Dothistroma septosporum	30.20	8.00e-76	278.00
IUUC-Dme-031917	Drosophila melanogaster	45.47	4.00e-144	504.00
IUUC-Ete-032319	Echinops telfairi	74.75	0.00e+00	845.00
IUUC-Eca-033927	Equus caballus	92.53	0.00e+00	1146.00
IUUC-Eeu-034449	Erinaceus europaeus	95.03	0.00e+00	900.00
IUUC-Fca-036325	Felis catus	93.00	0.00e+00	1132.00
IUUC-Fal-036604	Ficedula albicollis	96.72	0.00e+00	1156.00
IUUC-Fox-038049	Fusarium oxysporum	32.87	3.00e-49	189.00
IUUC-Gmo-038832	Gadus morhua	81.52	0.00e+00	982.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.28	3.00e-69	256.00
IUUC-Gga-041147	Gallus gallus	97.53	0.00e+00	1185.00
IUUC-Gac-041373	Gasterosteus aculeatus	85.64	0.00e+00	1018.00
IUUC-Gma-043230	Glycine max	37.66	2.00e-115	409.00
IUUC-Ggo-045526	Gorilla gorilla	92.12	0.00e+00	743.00
IUUC-Hsa-045971	Homo sapiens	92.95	0.00e+00	1129.00
IUUC-Hvu-047695	Hordeum vulgare	49.41	8.00e-88	317.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	92.79	0.00e+00	1129.00
IUUC-Kpa-049402	Komagataella pastoris	43.67	5.00e-97	348.00
IUUC-Lch-049526	Latimeria chalumnae	85.41	0.00e+00	1023.00
IUUC-Lpe-050793	Leersia perrieri	36.21	2.00e-85	309.00
IUUC-Loc-052882	Lepisosteus oculatus	88.74	0.00e+00	1086.00
IUUC-Lma-053212	Leptosphaeria maculans	30.62	4.00e-78	285.00
IUUC-Laf-053859	Loxodonta africana	92.67	0.00e+00	1130.00
IUUC-Mcc-054957	Macaca mulatta	94.71	0.00e+00	953.00
IUUC-Meu-056766	Macropus eugenii	91.16	9.00e-178	616.00
IUUC-Mor-057024	Magnaporthe oryzae	29.03	1.00e-65	244.00
IUUC-Mpo-057520	Magnaporthe poae	29.28	1.00e-69	257.00
IUUC-Mtr-058754	Medicago truncatula	37.76	2.00e-117	416.00
IUUC-Mla-058881	Melampsora laricipopulina	39.36	6.00e-82	298.00
IUUC-Mga-059776	Meleagris gallopavo	97.56	0.00e+00	1192.00
IUUC-Mvi-060208	Microbotryum violaceum	42.53	5.00e-84	305.00
IUUC-Mmr-061783	Microcebus murinus	94.71	0.00e+00	953.00
IUUC-Mdo-062856	Monodelphis domestica	92.83	0.00e+00	1129.00
IUUC-Mmu-064218	Mus musculus	92.67	0.00e+00	1130.00
IUUC-Mac-064886	Musa acuminata	52.29	3.00e-72	266.00
IUUC-Mpu-065735	Mustela putorius furo	93.00	0.00e+00	1133.00
IUUC-Mlu-067544	Myotis lucifugus	92.85	0.00e+00	1125.00
IUUC-Nfi-068502	Neosartorya fischeri	37.67	4.00e-79	288.00
IUUC-Ncr-068891	Neurospora crassa	30.73	5.00e-75	275.00
IUUC-Nle-069389	Nomascus leucogenys	92.95	0.00e+00	1128.00
IUUC-Opr-071042	Ochotona princeps	82.80	0.00e+00	644.00
IUUC-Ont-071455	Oreochromis niloticus	85.83	0.00e+00	1033.00
IUUC-Oan-073181	Ornithorhynchus anatinus	92.51	0.00e+00	1123.00
IUUC-Ocu-073758	Oryctolagus cuniculus	92.02	0.00e+00	1135.00
IUUC-Oba-075739	Oryza barthii	44.35	3.00e-81	295.00
IUUC-Obr-076111	Oryza brachyantha	37.60	9.00e-110	390.00
IUUC-Ogl-077914	Oryza glaberrima	36.23	2.00e-97	349.00
IUUC-Ogu-078190	Oryza glumaepatula	51.09	8.00e-81	294.00
IUUC-Oin-079473	Oryza indica	36.77	3.00e-100	358.00
IUUC-Olo-080645	Oryza longistaminata	52.47	1.00e-69	257.00
IUUC-Ome-081831	Oryza meridionalis	52.38	2.00e-70	259.00
IUUC-Oni-082431	Oryza nivara	51.81	4.00e-81	295.00
IUUC-Opu-083325	Oryza punctata	35.26	2.00e-89	322.00
IUUC-Oru-085154	Oryza rufipogon	51.81	8.00e-81	294.00
IUUC-Osa-086189	Oryza sativa	36.77	4.00e-100	358.00
IUUC-Ola-086574	Oryzias latipes	87.19	0.00e+00	1060.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.96	1.00e-82	300.00
IUUC-Oga-088827	Otolemur garnettii	92.79	0.00e+00	1125.00
IUUC-Oar-089648	Ovis aries	92.67	0.00e+00	1131.00
IUUC-Ptr-091195	Pan troglodytes	92.67	0.00e+00	1131.00
IUUC-Pan-091978	Papio anubis	92.79	0.00e+00	1129.00
IUUC-Psi-093598	Pelodiscus sinensis	94.40	0.00e+00	1045.00
IUUC-Pno-094823	Phaeosphaeria nodorum	29.60	5.00e-80	291.00
IUUC-Ppa-095455	Physcomitrella patens	37.95	2.00e-109	389.00
IUUC-Pfo-097120	Poecilia formosa	86.47	0.00e+00	1027.00
IUUC-Pab-098771	Pongo abelii	92.95	0.00e+00	1128.00
IUUC-Pop-099542	Populus trichocarpa	36.93	7.00e-112	397.00
IUUC-Pca-100804	Procavia capensis	82.22	0.00e+00	856.00
IUUC-Ppe-101686	Prunus persica	37.07	9.00e-108	384.00
IUUC-Pva-102414	Pteropus vampyrus	87.46	0.00e+00	1039.00
IUUC-Pgr-103603	Puccinia graminis	37.65	1.00e-74	274.00
IUUC-Ptt-103995	Puccinia triticina	39.36	2.00e-69	257.00
IUUC-Pte-104359	Pyrenophora teres	30.05	4.00e-80	292.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	29.50	3.00e-80	292.00
IUUC-Rno-105064	Rattus norvegicus	92.67	0.00e+00	1132.00
IUUC-Sce-106186	Saccharomyces cerevisiae	43.21	1.00e-91	330.00
IUUC-Sha-106582	Sarcophilus harrisii	92.68	0.00e+00	1122.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	37.48	3.00e-109	389.00
IUUC-Spo-108142	Schizosaccharomyces pombe	36.95	9.00e-109	387.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	27.31	2.00e-74	273.00
IUUC-Smo-109111	Selaginella moellendorffii	37.27	2.00e-105	376.00
IUUC-Sit-109804	Setaria italica	37.68	5.00e-104	371.00
IUUC-Sly-111693	Solanum lycopersicum	36.72	3.00e-106	379.00
IUUC-Sar-113412	Sorex araneus	90.68	0.00e+00	744.00
IUUC-Sbi-114849	Sorghum bicolor	36.85	8.00e-102	364.00
IUUC-Sre-114945	Sporisorium reilianum	35.79	6.00e-80	292.00
IUUC-Ssc-115582	Sus scrofa	77.18	0.00e+00	928.00
IUUC-Tgu-116899	Taeniopygia guttata	97.16	0.00e+00	1144.00
IUUC-Tru-118011	Takifugu rubripes	85.48	0.00e+00	1022.00
IUUC-Tsy-119262	Tarsius syrichta	71.43	3.00e-97	348.00
IUUC-Tni-120598	Tetraodon nigroviridis	85.06	0.00e+00	1011.00
IUUC-Tca-121247	Theobroma cacao	44.65	1.00e-93	337.00
IUUC-Tre-121949	Trichoderma reesei	35.31	4.00e-63	235.00
IUUC-Tvi-122626	Trichoderma virens	32.15	4.00e-64	239.00
IUUC-Tae-123335	Triticum aestivum	50.00	1.00e-89	323.00
IUUC-Tur-126005	Triticum urartu	45.93	3.00e-83	302.00
IUUC-Tme-126904	Tuber melanosporum	43.27	2.00e-93	336.00
IUUC-Tbe-127254	Tupaia belangeri	86.81	0.00e+00	1033.00
IUUC-Ttr-128544	Tursiops truncatus	92.67	0.00e+00	1130.00
IUUC-Uma-129379	Ustilago maydis	34.94	6.00e-79	288.00
IUUC-Vda-129761	Verticillium dahliae	38.70	3.00e-56	213.00
IUUC-Vpa-130485	Vicugna pacos	93.00	0.00e+00	1132.00
IUUC-Vvi-131171	Vitis vinifera	37.36	5.00e-113	401.00
IUUC-Xtr-132762	Xenopus tropicalis	78.23	0.00e+00	914.00
IUUC-Xma-133583	Xiphophorus maculatus	86.30	0.00e+00	1026.00
IUUC-Yli-134446	Yarrowia lipolytica	37.50	8.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence