iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000003452.7	ENSRNOT00000041515.5	ENSRNOP00000038983.5
ENSRNOG00000003452.7	ENSRNOT00000004693.5	ENSRNOP00000004693.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	2.30e-15	56.6	298	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box

   S: 4    lwllrseprSLqhLCRlaIrrclgsqrlkaidkLPLPksLkdYLly 49
           ++l r+ p SL++LCRl+Ir+c+g++++++i++L LP++Lk++Ll+
   Q: 298  IFLQREGPLSLMQLCRLRIRKCFGIRQHHKITGLLLPEDLKRFLLH 343
           6778899**************************************9 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSSSHLRTRL PGPGRVQFDQ PQSWNFPGAP EAWHLSFPEQ PKWNIRVCWP RKINMDGEQG 60
GRSDKPGGSP HLRFLSNPLM GDVVSDWSPL HDAAIHGRLL TLRNLISQGW PVNIITADHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTAAAGACG AGCTCTAAAG CAGCAGAATG CTTCAACTAG CTGCTGAAGA AGGTGTCAGA 60
AGGCCTGGAC CATGGAAAGA GATTACTTTT GGGGATTATA TATGTCACAC GTTTCAGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001496--SOCS_box

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50225--SOCS

Pfam

PF12796--Ank_2
PF07525--SOCS_box

SMART

SM00248--ANK
SM00969--SOCS_box

Gene Ontology

GO:0005622--C:intracellular
GO:0035556--P:intracellular signal transduction
GO:0045732--P:positive regulation of protein catabolic process
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001511	Ailuropoda melanoleuca	76.79	3.00e-131	461.00
IUUC-Apl-004034	Anas platyrhynchos	70.74	1.00e-111	395.00
IUUC-Aca-004804	Anolis carolinensis	69.40	7.00e-112	396.00
IUUC-Bta-013012	Bos taurus	74.23	3.00e-125	441.00
IUUC-Cja-019500	Callithrix jacchus	73.47	2.00e-125	441.00
IUUC-Cfa-020277	Canis familiaris	76.11	1.00e-126	445.00
IUUC-Cpo-022413	Cavia porcellus	71.43	3.00e-122	431.00
IUUC-Csa-023256	Chlorocebus sabaeus	74.15	3.00e-126	444.00
IUUC-Cho-024465	Choloepus hoffmanni	59.12	2.00e-50	192.00
IUUC-Dre-028590	Danio rerio	47.10	2.00e-60	225.00
IUUC-Dno-030092	Dasypus novemcinctus	69.69	2.00e-119	421.00
IUUC-Dor-030215	Dipodomys ordii	68.29	4.00e-117	414.00
IUUC-Ete-032417	Echinops telfairi	64.68	9.00e-90	322.00
IUUC-Eca-033417	Equus caballus	77.08	4.00e-133	467.00
IUUC-Eeu-034447	Erinaceus europaeus	47.24	1.00e-72	266.00
IUUC-Fca-035857	Felis catus	71.67	7.00e-124	436.00
IUUC-Fal-037651	Ficedula albicollis	68.51	6.00e-114	403.00
IUUC-Gmo-039177	Gadus morhua	46.36	5.00e-58	217.00
IUUC-Gga-040657	Gallus gallus	66.67	5.00e-105	374.00
IUUC-Gac-041598	Gasterosteus aculeatus	49.24	1.00e-70	259.00
IUUC-Ggo-044466	Gorilla gorilla	74.58	2.00e-125	441.00
IUUC-Hsa-046556	Homo sapiens	75.51	6.00e-128	449.00
IUUC-Itr-048278	Ictidomys tridecemlineatus	77.86	4.00e-129	453.00
IUUC-Lch-049860	Latimeria chalumnae	62.59	1.00e-101	362.00
IUUC-Loc-051897	Lepisosteus oculatus	54.83	2.00e-83	301.00
IUUC-Laf-054389	Loxodonta africana	77.19	8.00e-120	422.00
IUUC-Mcc-055379	Macaca mulatta	74.49	7.00e-127	446.00
IUUC-Meu-056744	Macropus eugenii	71.01	8.00e-115	406.00
IUUC-Mga-059201	Meleagris gallopavo	70.75	3.00e-102	364.00
IUUC-Mmr-060754	Microcebus murinus	77.49	1.00e-127	449.00
IUUC-Mdo-062259	Monodelphis domestica	72.00	5.00e-96	343.00
IUUC-Mmu-063265	Mus musculus	92.07	3.00e-156	543.00
IUUC-Mpu-065935	Mustela putorius furo	75.77	1.00e-129	455.00
IUUC-Mlu-066959	Myotis lucifugus	69.37	1.00e-116	412.00
IUUC-Nle-069305	Nomascus leucogenys	75.17	1.00e-127	448.00
IUUC-Opr-070484	Ochotona princeps	73.48	2.00e-108	384.00
IUUC-Ont-072570	Oreochromis niloticus	50.00	5.00e-72	264.00
IUUC-Oan-073662	Ornithorhynchus anatinus	65.99	5.00e-115	407.00
IUUC-Ocu-074056	Oryctolagus cuniculus	76.53	3.00e-126	444.00
IUUC-Ola-087123	Oryzias latipes	51.65	1.00e-71	262.00
IUUC-Oga-089102	Otolemur garnettii	72.26	2.00e-125	441.00
IUUC-Oar-090040	Ovis aries	74.48	6.00e-124	436.00
IUUC-Ptr-090773	Pan troglodytes	75.51	6.00e-128	449.00
IUUC-Pan-092542	Papio anubis	73.81	4.00e-126	443.00
IUUC-Psi-093549	Pelodiscus sinensis	72.49	7.00e-116	409.00
IUUC-Pma-094342	Petromyzon marinus	47.91	5.00e-58	217.00
IUUC-Pfo-097132	Poecilia formosa	50.78	8.00e-68	250.00
IUUC-Pab-097685	Pongo abelii	55.68	5.00e-79	287.00
IUUC-Pva-102452	Pteropus vampyrus	68.28	8.00e-116	409.00
IUUC-Sha-107096	Sarcophilus harrisii	72.37	2.00e-110	392.00
IUUC-Sar-113377	Sorex araneus	62.42	8.00e-54	202.00
IUUC-Ssc-115817	Sus scrofa	77.72	5.00e-84	303.00
IUUC-Tgu-117418	Taeniopygia guttata	70.88	4.00e-108	384.00
IUUC-Tru-117578	Takifugu rubripes	52.22	1.00e-71	262.00
IUUC-Tsy-118843	Tarsius syrichta	67.35	2.00e-108	385.00
IUUC-Tni-120408	Tetraodon nigroviridis	53.38	3.00e-76	278.00
IUUC-Tbe-127670	Tupaia belangeri	72.10	2.00e-116	412.00
IUUC-Ttr-129029	Tursiops truncatus	74.83	1.00e-119	422.00
IUUC-Vpa-130055	Vicugna pacos	79.25	2.00e-136	478.00
IUUC-Xtr-132425	Xenopus tropicalis	59.42	8.00e-98	349.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence