iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109658

Ensembl Protein ID

EFJ28642

UniProt Accession

D8RGS8; D8RGS8_SELML

Genbank Protein ID

EFJ28642.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377579

Gene Name

SELMODRAFT_147078

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_147078	EFJ28642	EFJ28642

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-24	86.2	61	96

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH + v+ ++f ++ ++lvsGsdD++i  WD+  g+
   Q: 61   GHRGCVNTVHFnPSgDRLVSGSDDKQIIFWDWMAGR 96
           8***********666****************98876 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MDCEGASSSR SSTPALELYK CRHFELYKRE IGSLRPSLYA HRIGGCEDMV QRLKEFRRLS 60
GHRGCVNTVH FNPSGDRLVS GSDDKQIIFW DWMAGRKKLI YHSGHEQNVF QARIMPFSDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCGAGCGA GCGCGCTGCG ATGGACTGCG AGGGCGCTTC GTCTTCGCGG AGCTCCACTC 60
CAGCTCTGGA GCTCTATAAA TGTAGGCACT TCGAGCTCTA CAAGCGCGAG ATCGGCAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_147078

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044124	Glycine max	48.40	7.00e-125	439.00
IUUC-Mtr-057813	Medicago truncatula	47.76	3.00e-123	434.00
IUUC-Oan-072748	Ornithorhynchus anatinus	25.34	1.00e-21	96.70
IUUC-Obr-076629	Oryza brachyantha	46.79	8.00e-126	443.00
IUUC-Ogu-078029	Oryza glumaepatula	50.80	8.00e-127	446.00
IUUC-Ome-081126	Oryza meridionalis	52.69	5.00e-120	423.00
IUUC-Oru-084724	Oryza rufipogon	51.03	5.00e-127	447.00
IUUC-Sit-110823	Setaria italica	48.30	3.00e-125	441.00
IUUC-Sly-111605	Solanum lycopersicum	52.83	6.00e-126	443.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence