iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112421

Ensembl Protein ID

PGSC0003DMT400047973

UniProt Accession

M1BLQ4; M1BLQ4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400018642	PGSC0003DMT400047973	PGSC0003DMT400047973
PGSC0003DMG400018642	PGSC0003DMT400047974	PGSC0003DMT400047974

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-18	65.5	52	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H + v+ ++f  d ++++sGsdD  i +WD+ tg+ 
   Q: 52   HRGCVNTVSFnADgDIVISGSDDRRIILWDWETGKI 87
           999********666*****************99985 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MRKTTRSSID CAVVDVWKRA VGELSTRNFA HRLGASEDLV LRLDVFRKLE KHRGCVNTVS 60
FNADGDIVIS GSDDRRIILW DWETGKIALS FHSGHHNNVF QAKIMPYTDD RSIVTCAADG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGACTCAAA ATCGTATTGA GGAGTTAAAA GAGGGAAAAA ATAAATATCG TATAAATTGG 60
GTGAGAAGTA AAAGGGAGGT GCAGTGTGTT CGTTTCCCTT GTCGCAGTTG CAAAATACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	59.32	6.00e-132	462.00
IUUC-Atr-002714	Amborella trichopoda	60.96	2.00e-143	501.00
IUUC-Aly-005505	Arabidopsis lyrata	65.13	2.00e-154	537.00
IUUC-Ath-007629	Arabidopsis thaliana	61.24	3.00e-151	527.00
IUUC-Bdi-014538	Brachypodium distachyon	62.01	1.00e-139	488.00
IUUC-Bol-015797	Brassica oleracea	64.13	8.00e-156	542.00
IUUC-Bra-017142	Brassica rapa	62.90	8.00e-152	528.00
IUUC-Gma-044062	Glycine max	73.24	0.00e+00	627.00
IUUC-Hvu-047075	Hordeum vulgare	61.13	7.00e-134	469.00
IUUC-Lpe-051327	Leersia perrieri	58.39	3.00e-137	480.00
IUUC-Mtr-058683	Medicago truncatula	71.86	0.00e+00	642.00
IUUC-Mac-065466	Musa acuminata	64.39	1.00e-162	565.00
IUUC-Nfi-068606	Neosartorya fischeri	49.50	2.00e-22	100.00
IUUC-Oan-072748	Ornithorhynchus anatinus	27.91	3.00e-17	81.60
IUUC-Oba-075028	Oryza barthii	60.89	6.00e-140	489.00
IUUC-Obr-076114	Oryza brachyantha	62.86	2.00e-139	488.00
IUUC-Ogl-077918	Oryza glaberrima	60.89	1.00e-139	488.00
IUUC-Ogu-078824	Oryza glumaepatula	60.89	9.00e-140	488.00
IUUC-Oin-080061	Oryza indica	61.04	1.00e-139	488.00
IUUC-Olo-081064	Oryza longistaminata	62.01	1.00e-138	485.00
IUUC-Ome-081405	Oryza meridionalis	60.89	2.00e-139	488.00
IUUC-Oni-082481	Oryza nivara	59.38	6.00e-137	479.00
IUUC-Opu-083681	Oryza punctata	61.60	8.00e-141	492.00
IUUC-Oru-084398	Oryza rufipogon	61.04	1.00e-139	488.00
IUUC-Osa-086227	Oryza sativa	60.89	3.00e-139	487.00
IUUC-Pno-095149	Phaeosphaeria nodorum	40.71	4.00e-17	82.80
IUUC-Pop-099784	Populus trichocarpa	65.47	2.00e-173	600.00
IUUC-Ppe-101712	Prunus persica	70.88	0.00e+00	667.00
IUUC-Sit-110744	Setaria italica	60.55	1.00e-139	488.00
IUUC-Sly-111727	Solanum lycopersicum	97.29	0.00e+00	899.00
IUUC-Sbi-114821	Sorghum bicolor	58.71	7.00e-138	482.00
IUUC-Tca-121555	Theobroma cacao	74.01	0.00e+00	651.00
IUUC-Tae-124601	Triticum aestivum	60.61	2.00e-135	474.00
IUUC-Tur-126617	Triticum urartu	61.13	8.00e-135	472.00
IUUC-Uma-129509	Ustilago maydis	27.55	1.00e-13	70.50
IUUC-Vvi-131540	Vitis vinifera	68.40	0.00e+00	634.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence