iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001909

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

ACTA01002135

Gene Name

RNF13; PANDA_012636

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000010433.1	ENSAMET00000011471.1	ENSAMEP00000011000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-09	36.9	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MLLSIGMLML SATQVYTILT VQLFAFLNLL PVEADILAYN FENASQTFDD LPARFGYRLP 60
AEGLKGFLIN SKPENACEPI VPPPLKDNSS GTFIVLIRRL DCNFDVKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGCTCT CCATAGGGAT GCTCATGCTG TCGGCTACAC AAGTCTATAC CATCTTGACT 60
GTCCAGCTCT TTGCATTCTT AAACCTACTA CCTGTAGAAG CAGACATTTT AGCAGTAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

aml:100481688

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	28.04	1.00e-17	84.70
IUUC-Atr-003055	Amborella trichopoda	32.16	5.00e-32	132.00
IUUC-Apl-004022	Anas platyrhynchos	91.08	1.00e-174	605.00
IUUC-Aca-004641	Anolis carolinensis	87.76	1.00e-169	588.00
IUUC-Aly-006519	Arabidopsis lyrata	33.46	8.00e-33	134.00
IUUC-Ani-009337	Aspergillus nidulans	46.30	4.00e-13	67.80
IUUC-Ame-010635	Astyanax mexicanus	72.22	3.00e-141	494.00
IUUC-Bta-012593	Bos taurus	97.64	0.00e+00	692.00
IUUC-Bci-013936	Botrytis cinerea	35.14	5.00e-13	69.30
IUUC-Bra-017689	Brassica rapa	33.45	1.00e-33	137.00
IUUC-Cel-018181	Caenorhabditis elegans	30.84	3.00e-28	119.00
IUUC-Cja-019353	Callithrix jacchus	96.59	0.00e+00	641.00
IUUC-Cfa-020234	Canis familiaris	99.21	0.00e+00	656.00
IUUC-Cpo-021602	Cavia porcellus	95.04	2.00e-159	555.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	61.20
IUUC-Csa-023201	Chlorocebus sabaeus	97.11	0.00e+00	644.00
IUUC-Cho-024954	Choloepus hoffmanni	81.89	1.00e-149	522.00
IUUC-Cin-025554	Ciona intestinalis	43.49	4.00e-62	231.00
IUUC-Csv-025959	Ciona savignyi	44.44	3.00e-52	199.00
IUUC-Dre-028744	Danio rerio	77.23	7.00e-137	479.00
IUUC-Dno-029675	Dasypus novemcinctus	97.38	0.00e+00	643.00
IUUC-Dor-030791	Dipodomys ordii	79.27	5.00e-137	480.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	2.00e-12	68.20
IUUC-Dme-031765	Drosophila melanogaster	40.43	1.00e-51	197.00
IUUC-Ete-032577	Echinops telfairi	86.79	1.00e-140	492.00
IUUC-Eca-034148	Equus caballus	97.38	0.00e+00	645.00
IUUC-Eeu-034552	Erinaceus europaeus	95.28	1.00e-179	622.00
IUUC-Fca-036021	Felis catus	98.95	0.00e+00	654.00
IUUC-Fal-037621	Ficedula albicollis	90.29	8.00e-172	596.00
IUUC-Gmo-039485	Gadus morhua	71.20	1.00e-134	472.00
IUUC-Gga-041166	Gallus gallus	90.81	6.00e-175	606.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.25	1.00e-129	456.00
IUUC-Ggo-045344	Gorilla gorilla	97.38	0.00e+00	646.00
IUUC-Hsa-045960	Homo sapiens	97.38	0.00e+00	646.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	96.06	0.00e+00	637.00
IUUC-Lch-050635	Latimeria chalumnae	82.19	4.00e-135	474.00
IUUC-Loc-052869	Lepisosteus oculatus	79.82	3.00e-141	494.00
IUUC-Laf-054477	Loxodonta africana	95.01	0.00e+00	637.00
IUUC-Mcc-055232	Macaca mulatta	97.11	0.00e+00	644.00
IUUC-Meu-056237	Macropus eugenii	82.72	2.00e-117	414.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	3.00e-13	69.70
IUUC-Mtr-058129	Medicago truncatula	33.20	1.00e-28	120.00
IUUC-Mla-059171	Melampsora laricipopulina	42.59	2.00e-10	60.80
IUUC-Mga-059780	Meleagris gallopavo	90.81	7.00e-175	606.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	4.00e-12	66.60
IUUC-Mmr-061384	Microcebus murinus	96.76	4.00e-180	623.00
IUUC-Mdo-062781	Monodelphis domestica	92.41	3.00e-180	624.00
IUUC-Mmu-063727	Mus musculus	94.23	2.00e-174	605.00
IUUC-Mpu-066497	Mustela putorius furo	99.48	0.00e+00	657.00
IUUC-Mlu-067654	Myotis lucifugus	95.71	7.00e-116	409.00
IUUC-Nle-069368	Nomascus leucogenys	97.38	0.00e+00	646.00
IUUC-Opr-070934	Ochotona princeps	68.50	1.00e-111	396.00
IUUC-Ont-071868	Oreochromis niloticus	75.86	4.00e-129	454.00
IUUC-Oan-072733	Ornithorhynchus anatinus	87.90	1.00e-106	378.00
IUUC-Ocu-074083	Oryctolagus cuniculus	96.59	0.00e+00	642.00
IUUC-Ogl-077861	Oryza glaberrima	35.18	2.00e-30	126.00
IUUC-Ogu-078205	Oryza glumaepatula	34.39	2.00e-28	120.00
IUUC-Olo-081024	Oryza longistaminata	34.78	2.00e-29	124.00
IUUC-Ome-081844	Oryza meridionalis	35.18	3.00e-30	126.00
IUUC-Oru-085122	Oryza rufipogon	33.23	4.00e-28	119.00
IUUC-Osa-086175	Oryza sativa	35.18	2.00e-30	126.00
IUUC-Ola-086440	Oryzias latipes	75.00	1.00e-116	412.00
IUUC-Oga-088291	Otolemur garnettii	92.18	6.00e-169	586.00
IUUC-Oar-089911	Ovis aries	97.38	0.00e+00	690.00
IUUC-Ptr-091166	Pan troglodytes	97.38	0.00e+00	646.00
IUUC-Pan-092154	Papio anubis	97.11	0.00e+00	644.00
IUUC-Psi-093062	Pelodiscus sinensis	91.60	2.00e-170	591.00
IUUC-Pma-094545	Petromyzon marinus	73.21	7.00e-26	108.00
IUUC-Ppa-095928	Physcomitrella patens	35.23	1.00e-31	130.00
IUUC-Pfo-097232	Poecilia formosa	77.74	1.00e-132	466.00
IUUC-Pab-097909	Pongo abelii	97.11	0.00e+00	647.00
IUUC-Pop-099688	Populus trichocarpa	32.08	9.00e-23	100.00
IUUC-Pca-100724	Procavia capensis	79.67	1.00e-139	489.00
IUUC-Ppe-101605	Prunus persica	31.77	1.00e-28	119.00
IUUC-Pva-102624	Pteropus vampyrus	91.86	1.00e-166	579.00
IUUC-Pgr-103420	Puccinia graminis	55.32	2.00e-12	68.20
IUUC-Ptt-103943	Puccinia triticina	44.44	8.00e-11	62.00
IUUC-Rno-105109	Rattus norvegicus	92.13	7.00e-167	579.00
IUUC-Sha-107563	Sarcophilus harrisii	92.41	9.00e-176	609.00
IUUC-Spo-108083	Schizosaccharomyces pombe	26.52	1.00e-14	73.60
IUUC-Ssl-108601	Sclerotinia sclerotiorum	41.07	7.00e-13	68.60
IUUC-Smo-109274	Selaginella moellendorffii	36.22	2.00e-32	132.00
IUUC-Sit-110628	Setaria italica	32.98	1.00e-30	127.00
IUUC-Sly-110842	Solanum lycopersicum	29.77	2.00e-28	119.00
IUUC-Ssc-116043	Sus scrofa	97.90	0.00e+00	647.00
IUUC-Tgu-116908	Taeniopygia guttata	90.31	2.00e-172	598.00
IUUC-Tru-118219	Takifugu rubripes	76.42	1.00e-132	465.00
IUUC-Tsy-119333	Tarsius syrichta	97.90	0.00e+00	642.00
IUUC-Tni-120332	Tetraodon nigroviridis	72.29	2.00e-89	321.00
IUUC-Tae-125320	Triticum aestivum	31.52	1.00e-29	123.00
IUUC-Tbe-127859	Tupaia belangeri	86.32	6.00e-168	583.00
IUUC-Ttr-129219	Tursiops truncatus	88.45	7.00e-159	553.00
IUUC-Vda-129899	Verticillium dahliae	43.40	7.00e-13	68.60
IUUC-Vpa-130314	Vicugna pacos	94.75	6.00e-176	609.00
IUUC-Vvi-131355	Vitis vinifera	33.46	5.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	76.67	1.00e-133	469.00
IUUC-Xma-133474	Xiphophorus maculatus	77.74	9.00e-133	466.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence