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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007038
Ensembl Protein ID AT3G10220.1
UniProt Accession Q67Z52; Q67XW4; Q8L5R5; Q9SS34; TBCB_ARATH
Genbank Protein ID AAM22958.1; AAF02820.1; AEE74873.1; BAD43946.1; BAD44029.1; BAD44467.1
Protein Name Tubulin-folding cofactor B; Protein EMBRYO DEFECTIVE 2804
Genbank Nucleotide ID AF486849; AC009400; CP002686; AK176183; AK176266; AK176704
Gene Name TFCB; EMB2804; TBCB; At3g10220; F14P13.18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G10220 AT3G10220.1 AT3G10220.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein 3D Structure
PDB
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 40.44 1.00e-37 152.00 IUUC-Cel-018176
ULD/UDP/UBQ/UBQ_Other 31.00 2.00e-19 90.10 IUUC-Spo-108310
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Involved in control of cell division. Regulates probably the availability of alpha-tubulin for dimerization of alpha-/beta-tubulin, which is required for proper microtubule biogenesis. Decreased expression of TFCB results in enlarged mesophyll cells and leaf epidermal cells with bulged nuclei, increased ploidy and increased numbers of spindles and phragmoplasts.
 Involved in control of cell division. Regulates probably the availability of alpha-tubulin for dimerization of alpha-/beta-tubulin, which is required for proper microtubule biogenesis. Decreased expression of TFCB results in enlarged mesophyll cells and leaf epidermal cells with bulged nuclei, increased ploidy and increased numbers of spindles and phragmoplasts.
Protein Sequence
(Fasta)
MATSRLQLEG DDSVHLHITH ANLKSFSADA RFSPQMSVEA VKEKLWKKCG TSVNSMALEL 60
YDDSGSKVAV LSDDSRPLGF FSPFDGFRLH IIDLDPSSVT TGGWLEDTSL VEKYNISEED 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007038|ULD,UBQ_Other|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCTAACGAG TCTAATGACC TTTTGAACAC TAGAGAAAAC TACGTCGTTT TATTAATCGT 60
CTCTCTCGTT TCTCAGCTAC ATTCTCAGCG GTGCGTCTCC GATCCGGCGA GATTCGATTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007038|ULD,UBQ_Other|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0143--Chaperone
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
Interpro

IPR000938--CAP-Gly_domain
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
PROSITE

PS50245--CAP_GLY_2
Pfam

PF01302--CAP_GLY
PF14560--Ubiquitin_2
SMART

SM01052--CAP_GLY
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0009524--C:phragmoplast
GO:0051301--P:cell division
GO:0009793--P:embryo development ending in seed dormancy
KEGG ath:AT3G10220
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000863 Aegilops tauschii 60.08 1.00e-80 291.00
IUUC-Aml-002358 Ailuropoda melanoleuca 37.66 2.00e-32 131.00
IUUC-Atr-003043 Amborella trichopoda 69.71 1.00e-99 355.00
IUUC-Apl-003356 Anas platyrhynchos 33.33 1.20e+00 28.50
IUUC-Aca-004737 Anolis carolinensis 40.00 9.00e-32 129.00
IUUC-Aly-005916 Arabidopsis lyrata 97.94 2.00e-141 493.00
IUUC-Ago-007723 Ashbya gossypii 38.71 2.00e-07 48.50
IUUC-Acl-008216 Aspergillus clavatus 29.24 2.00e-19 88.60
IUUC-Afl-008534 Aspergillus flavus 30.28 2.00e-18 85.50
IUUC-Afu-008927 Aspergillus fumigatus 30.64 1.00e-17 82.40
IUUC-Ani-009283 Aspergillus nidulans 27.90 2.00e-17 81.60
IUUC-Ang-009564 Aspergillus niger 32.42 1.00e-20 92.80
IUUC-Aor-010034 Aspergillus oryzae 30.28 2.00e-18 85.50
IUUC-Ate-010424 Aspergillus terreus 30.43 6.00e-18 83.60
IUUC-Ame-011741 Astyanax mexicanus 38.91 2.00e-32 132.00
IUUC-Bgr-011988 Blumeria graminis 32.14 1.00e-19 89.40
IUUC-Bta-013304 Bos taurus 38.27 5.00e-36 143.00
IUUC-Bci-013694 Botrytis cinerea 33.92 4.00e-22 97.40
IUUC-Bdi-014585 Brachypodium distachyon 65.49 7.00e-89 319.00
IUUC-Bol-015891 Brassica oleracea 87.65 3.00e-130 456.00
IUUC-Bra-017389 Brassica rapa 88.93 7.00e-132 462.00
IUUC-Cel-018176 Caenorhabditis elegans 40.44 7.00e-39 152.00
IUUC-Cja-019754 Callithrix jacchus 36.28 2.00e-32 131.00
IUUC-Cfa-020813 Canis familiaris 38.50 7.00e-34 137.00
IUUC-Cpo-021932 Cavia porcellus 37.17 1.00e-33 135.00
IUUC-Cre-022753 Chlamydomonas reinhardtii 49.79 2.00e-61 228.00
IUUC-Csa-023261 Chlorocebus sabaeus 36.91 9.00e-33 132.00
IUUC-Cho-024486 Choloepus hoffmanni 29.63 1.10e+00 28.50
IUUC-Cin-025428 Ciona intestinalis 36.13 5.00e-33 133.00
IUUC-Csv-025811 Ciona savignyi 36.32 5.00e-29 120.00
IUUC-Cgl-026504 Colletotrichum gloeosporioides 35.09 3.00e-25 107.00
IUUC-Cne-026867 Cryptococcus neoformans 33.48 1.00e-26 112.00
IUUC-Cme-027227 Cyanidioschyzon merolae 35.00 4.00e-15 74.30
IUUC-Dre-028683 Danio rerio 39.37 3.00e-32 130.00
IUUC-Dno-029817 Dasypus novemcinctus 38.05 3.00e-33 134.00
IUUC-Dor-030906 Dipodomys ordii 37.45 3.00e-32 130.00
IUUC-Dse-031240 Dothistroma septosporum 31.22 2.00e-22 98.60
IUUC-Dme-031894 Drosophila melanogaster 29.32 1.00e-25 108.00
IUUC-Ete-032734 Echinops telfairi 22.31 1.00e-01 32.00
IUUC-Eca-034216 Equus caballus 38.03 4.00e-35 140.00
IUUC-Eeu-035155 Erinaceus europaeus 40.39 1.00e-29 122.00
IUUC-Fca-035461 Felis catus 38.05 2.00e-33 135.00
IUUC-Fal-037458 Ficedula albicollis 36.59 6.00e-10 58.90
IUUC-Fox-037822 Fusarium oxysporum 34.93 8.00e-27 112.00
IUUC-Fso-038149 Fusarium solani 33.19 3.00e-25 107.00
IUUC-Gmo-038810 Gadus morhua 34.50 1.00e-26 112.00
IUUC-Ggr-039751 Gaeumannomyces graminis 33.56 2.00e-13 68.60
IUUC-Gga-040168 Gallus gallus 40.00 2.00e-08 52.80
IUUC-Gac-041700 Gasterosteus aculeatus 36.00 2.00e-31 128.00
IUUC-Gma-044336 Glycine max 73.25 2.00e-107 380.00
IUUC-Ggo-044442 Gorilla gorilla 38.57 7.00e-29 119.00
IUUC-Hsa-046441 Homo sapiens 36.91 8.00e-33 132.00
IUUC-Hvu-047163 Hordeum vulgare 65.64 4.00e-83 300.00
IUUC-Itr-048652 Ictidomys tridecemlineatus 38.46 9.00e-36 142.00
IUUC-Kpa-049126 Komagataella pastoris 27.39 2.00e-19 89.00
IUUC-Lch-050256 Latimeria chalumnae 36.89 1.00e-34 138.00
IUUC-Lpe-051676 Leersia perrieri 67.21 9.00e-94 335.00
IUUC-Loc-051891 Lepisosteus oculatus 38.36 1.00e-33 135.00
IUUC-Lma-052977 Leptosphaeria maculans 31.85 1.00e-21 95.50
IUUC-Laf-053381 Loxodonta africana 36.73 9.00e-33 132.00
IUUC-Mcc-055434 Macaca mulatta 36.91 9.00e-33 132.00
IUUC-Meu-056675 Macropus eugenii 29.91 3.00e-15 74.70
IUUC-Mor-056937 Magnaporthe oryzae 34.76 1.00e-23 102.00
IUUC-Mpo-057404 Magnaporthe poae 30.74 2.00e-19 88.20
IUUC-Mtr-058357 Medicago truncatula 70.87 2.00e-98 350.00
IUUC-Mla-059125 Melampsora laricipopulina 35.06 6.00e-32 130.00
IUUC-Mga-059996 Meleagris gallopavo 40.00 1.00e-09 57.00
IUUC-Mvi-060558 Microbotryum violaceum 30.25 2.00e-27 115.00
IUUC-Mmr-061473 Microcebus murinus 37.17 4.00e-33 134.00
IUUC-Mdo-061846 Monodelphis domestica 40.17 4.00e-34 137.00
IUUC-Mmu-063321 Mus musculus 39.21 4.00e-33 134.00
IUUC-Mac-065590 Musa acuminata 77.92 1.00e-111 395.00
IUUC-Mpu-066149 Mustela putorius furo 38.50 4.00e-34 137.00
IUUC-Mlu-067002 Myotis lucifugus 38.05 5.00e-34 136.00
IUUC-Nfi-068351 Neosartorya fischeri 30.21 4.00e-17 80.90
IUUC-Ncr-068854 Neurospora crassa 32.19 9.00e-22 96.30
IUUC-Nle-069008 Nomascus leucogenys 36.05 2.00e-31 128.00
IUUC-Opr-070608 Ochotona princeps 38.05 2.00e-33 134.00
IUUC-Ont-071543 Oreochromis niloticus 36.93 7.00e-32 129.00
IUUC-Oan-073488 Ornithorhynchus anatinus 33.53 2.00e-12 64.70
IUUC-Ocu-073951 Oryctolagus cuniculus 38.03 7.00e-35 139.00
IUUC-Oba-075033 Oryza barthii 61.98 6.00e-87 312.00
IUUC-Obr-076908 Oryza brachyantha 66.26 3.00e-97 347.00
IUUC-Ogl-077907 Oryza glaberrima 65.02 3.00e-94 337.00
IUUC-Ogu-078871 Oryza glumaepatula 61.98 6.00e-87 312.00
IUUC-Oin-080206 Oryza indica 64.73 5.00e-93 332.00
IUUC-Olo-080756 Oryza longistaminata 71.43 2.00e-43 166.00
IUUC-Ome-081319 Oryza meridionalis 71.96 2.00e-44 169.00
IUUC-Oni-082550 Oryza nivara 62.34 4.00e-85 306.00
IUUC-Opu-083656 Oryza punctata 60.98 3.00e-91 327.00
IUUC-Oru-084482 Oryza rufipogon 61.98 6.00e-87 312.00
IUUC-Osa-085952 Oryza sativa 65.02 3.00e-94 337.00
IUUC-Ola-087407 Oryzias latipes 37.56 2.00e-29 121.00
IUUC-Olu-087778 Ostreococcus lucimarinus 43.09 9.00e-59 219.00
IUUC-Oga-088233 Otolemur garnettii 37.18 3.00e-33 134.00
IUUC-Oar-089581 Ovis aries 39.74 1.00e-36 145.00
IUUC-Ptr-091547 Pan troglodytes 36.91 8.00e-33 132.00
IUUC-Pan-092061 Papio anubis 36.91 9.00e-33 132.00
IUUC-Psi-093234 Pelodiscus sinensis 41.21 1.00e-28 118.00
IUUC-Pma-094359 Petromyzon marinus 37.22 2.00e-32 132.00
IUUC-Pno-094999 Phaeosphaeria nodorum 29.67 7.00e-23 99.80
IUUC-Ppa-095653 Physcomitrella patens 51.88 5.00e-74 270.00
IUUC-Pfo-096130 Poecilia formosa 35.19 4.00e-31 127.00
IUUC-Pab-097740 Pongo abelii 36.54 9.00e-01 28.90
IUUC-Pop-099133 Populus trichocarpa 73.66 1.00e-109 388.00
IUUC-Pca-100784 Procavia capensis 31.17 2.00e-21 94.70
IUUC-Ppe-101764 Prunus persica 72.84 3.00e-109 386.00
IUUC-Pva-102882 Pteropus vampyrus 38.50 1.00e-34 139.00
IUUC-Pgr-103337 Puccinia graminis 30.13 4.00e-27 114.00
IUUC-Ptt-103764 Puccinia triticina 29.02 7.00e-22 97.40
IUUC-Pte-104265 Pyrenophora teres 31.68 1.00e-17 82.80
IUUC-Pyt-104528 Pyrenophora triticirepentis 41.77 7.00e-15 73.90
IUUC-Rno-104851 Rattus norvegicus 40.53 2.00e-33 135.00
IUUC-Sce-106183 Saccharomyces cerevisiae 24.88 3.00e-08 51.60
IUUC-Sha-106933 Sarcophilus harrisii 39.51 6.00e-07 48.50
IUUC-Sja-107978 Schizosaccharomyces japonicus 33.77 3.00e-22 97.80
IUUC-Spo-108310 Schizosaccharomyces pombe 31.00 6.00e-20 90.10
IUUC-Ssl-108484 Sclerotinia sclerotiorum 28.18 5.00e-14 70.50
IUUC-Sit-110751 Setaria italica 63.79 3.00e-87 313.00
IUUC-Sly-111811 Solanum lycopersicum 69.83 5.00e-105 372.00
IUUC-Stu-111984 Solanum tuberosum 68.60 4.00e-103 366.00
IUUC-Sar-113382 Sorex araneus 30.18 2.00e-12 64.70
IUUC-Sbi-113807 Sorghum bicolor 62.61 2.00e-81 294.00
IUUC-Sre-115083 Sporisorium reilianum 37.42 1.00e-24 105.00
IUUC-Ssc-116306 Sus scrofa 38.50 3.00e-34 137.00
IUUC-Tru-117880 Takifugu rubripes 33.47 3.00e-29 120.00
IUUC-Tsy-119610 Tarsius syrichta 33.33 8.60e-01 28.90
IUUC-Tni-119713 Tetraodon nigroviridis 34.51 3.00e-28 117.00
IUUC-Tca-121819 Theobroma cacao 76.35 8.00e-113 398.00
IUUC-Tre-122044 Trichoderma reesei 35.65 1.00e-25 108.00
IUUC-Tvi-122273 Trichoderma virens 34.78 1.00e-24 105.00
IUUC-Tae-123023 Triticum aestivum 68.72 1.00e-85 308.00
IUUC-Tur-126446 Triticum urartu 70.86 2.00e-65 240.00
IUUC-Tme-127153 Tuber melanosporum 29.00 9.00e-21 92.80
IUUC-Tbe-127834 Tupaia belangeri 32.19 2.00e-09 53.90
IUUC-Ttr-128351 Tursiops truncatus 55.38 2.00e-17 81.60
IUUC-Uma-129608 Ustilago maydis 34.55 3.00e-20 91.30
IUUC-Vda-129806 Verticillium dahliae 32.08 7.00e-25 106.00
IUUC-Vpa-130329 Vicugna pacos 34.52 1.00e-10 60.80
IUUC-Vvi-131178 Vitis vinifera 75.10 2.00e-110 390.00
IUUC-Xtr-132139 Xenopus tropicalis 39.15 1.00e-37 148.00
IUUC-Xma-134015 Xiphophorus maculatus 35.19 5.00e-31 127.00
IUUC-Yli-134439 Yarrowia lipolytica 31.25 3.00e-22 97.80
IUUC-Zma-135720 Zea mays 63.48 4.00e-79 286.00
Created Date 25-Jun-2017

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