iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086806

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04008467

Gene Name

nedd1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000014380.1	ENSORLT00000018025.1	ENSORLP00000018024.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-21	74.8	87	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 12   sd.tllvsGsdDgtikvWDlrtgvll 36
           s+  +lvsG+ D+ +++WDl+t +l 
   Q: 87   SSfQFLVSGGLDHCVHIWDLKTSRLH 112
           44467***************998876 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MEEATRLVST GDCVKLWDVV TMAPLEQFNP HNSGSPVAQA CWSSNNQYLV SASSSGDKLV 60
VSSLKLAPVP VVELAEGKKQ TRVCLSSSFQ FLVSGGLDHC VHIWDLKTSR LHRSLKDHKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCCAGCCC TGCCATGGAG GAGGCGACTC GCCTGGTGTC GACCGGAGAC TGTGTGAAGC 60
TCTGGGATGT GGTTACCATG GCACCGCTGG AGCAGTTTAA TCCCCACAAC AGCGGCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	25.97	4.00e-15	77.00
IUUC-Aml-002397	Ailuropoda melanoleuca	41.27	8.00e-139	487.00
IUUC-Atr-002464	Amborella trichopoda	34.64	3.00e-36	147.00
IUUC-Apl-003870	Anas platyrhynchos	43.66	4.00e-145	508.00
IUUC-Aca-004925	Anolis carolinensis	53.40	9.00e-99	354.00
IUUC-Aly-005931	Arabidopsis lyrata	32.60	6.00e-34	139.00
IUUC-Ath-006681	Arabidopsis thaliana	32.92	1.00e-34	141.00
IUUC-Ame-010906	Astyanax mexicanus	73.77	3.00e-130	459.00
IUUC-Bta-013389	Bos taurus	41.71	3.00e-139	488.00
IUUC-Bdi-014340	Brachypodium distachyon	32.81	5.00e-37	149.00
IUUC-Bol-016282	Brassica oleracea	33.66	2.00e-35	144.00
IUUC-Bra-017178	Brassica rapa	33.23	5.00e-35	142.00
IUUC-Cja-019541	Callithrix jacchus	41.18	1.00e-141	496.00
IUUC-Cfa-021218	Canis familiaris	40.28	3.00e-136	478.00
IUUC-Cpo-021697	Cavia porcellus	39.97	1.00e-127	449.00
IUUC-Csa-023620	Chlorocebus sabaeus	41.63	2.00e-146	513.00
IUUC-Cho-025105	Choloepus hoffmanni	36.36	3.00e-90	325.00
IUUC-Cin-025293	Ciona intestinalis	38.67	9.00e-50	191.00
IUUC-Csv-026234	Ciona savignyi	34.98	5.00e-43	167.00
IUUC-Dre-028251	Danio rerio	74.92	3.00e-121	429.00
IUUC-Dno-029281	Dasypus novemcinctus	39.68	3.00e-104	372.00
IUUC-Dor-031020	Dipodomys ordii	58.28	1.00e-50	194.00
IUUC-Ete-033113	Echinops telfairi	56.11	6.00e-87	315.00
IUUC-Eca-034230	Equus caballus	41.94	1.00e-134	473.00
IUUC-Eeu-034671	Erinaceus europaeus	40.13	5.00e-82	298.00
IUUC-Fca-035775	Felis catus	41.97	8.00e-142	497.00
IUUC-Fal-037557	Ficedula albicollis	41.51	7.00e-133	467.00
IUUC-Gmo-038586	Gadus morhua	45.23	2.00e-137	482.00
IUUC-Gga-040153	Gallus gallus	42.86	4.00e-146	511.00
IUUC-Gac-041385	Gasterosteus aculeatus	61.99	0.00e+00	719.00
IUUC-Gma-042844	Glycine max	33.54	1.00e-37	151.00
IUUC-Ggo-044576	Gorilla gorilla	42.08	2.00e-147	516.00
IUUC-Hsa-046198	Homo sapiens	41.80	8.00e-147	513.00
IUUC-Hvu-047794	Hordeum vulgare	30.77	2.00e-13	68.60
IUUC-Lch-050561	Latimeria chalumnae	36.72	5.00e-92	332.00
IUUC-Lpe-051469	Leersia perrieri	32.81	6.00e-36	145.00
IUUC-Loc-052816	Lepisosteus oculatus	50.29	1.00e-115	410.00
IUUC-Laf-053880	Loxodonta africana	40.53	1.00e-129	456.00
IUUC-Mcc-054977	Macaca mulatta	41.80	1.00e-146	513.00
IUUC-Meu-056141	Macropus eugenii	49.67	1.00e-86	314.00
IUUC-Mtr-058441	Medicago truncatula	33.33	2.00e-36	147.00
IUUC-Mga-060141	Meleagris gallopavo	42.78	4.00e-141	494.00
IUUC-Mmr-061201	Microcebus murinus	41.13	4.00e-141	495.00
IUUC-Mdo-061855	Monodelphis domestica	42.13	2.00e-136	479.00
IUUC-Mmu-064342	Mus musculus	40.81	3.00e-135	475.00
IUUC-Mac-065368	Musa acuminata	30.95	1.00e-32	135.00
IUUC-Mpu-066191	Mustela putorius furo	40.14	2.00e-137	482.00
IUUC-Mlu-067310	Myotis lucifugus	55.19	1.00e-104	373.00
IUUC-Nle-069990	Nomascus leucogenys	41.65	2.00e-146	512.00
IUUC-Opr-070336	Ochotona princeps	38.58	2.00e-115	409.00
IUUC-Ont-071675	Oreochromis niloticus	68.80	0.00e+00	829.00
IUUC-Oan-072772	Ornithorhynchus anatinus	40.06	4.00e-113	401.00
IUUC-Ocu-074095	Oryctolagus cuniculus	42.19	1.00e-142	500.00
IUUC-Oba-075327	Oryza barthii	32.49	6.00e-35	142.00
IUUC-Obr-076119	Oryza brachyantha	32.70	2.00e-35	144.00
IUUC-Ogl-077820	Oryza glaberrima	32.81	2.00e-35	144.00
IUUC-Ogu-078679	Oryza glumaepatula	32.21	4.00e-35	143.00
IUUC-Oin-079891	Oryza indica	32.49	4.00e-35	143.00
IUUC-Olo-080414	Oryza longistaminata	33.21	5.00e-33	135.00
IUUC-Ome-081888	Oryza meridionalis	32.70	2.00e-35	143.00
IUUC-Oni-082417	Oryza nivara	32.49	3.00e-35	143.00
IUUC-Opu-083393	Oryza punctata	32.49	4.00e-35	143.00
IUUC-Oru-084698	Oryza rufipogon	32.49	3.00e-35	144.00
IUUC-Osa-086121	Oryza sativa	32.49	3.00e-35	143.00
IUUC-Olu-087591	Ostreococcus lucimarinus	26.01	7.00e-12	65.10
IUUC-Oga-088622	Otolemur garnettii	42.24	1.00e-141	496.00
IUUC-Oar-090391	Ovis aries	38.87	6.00e-110	391.00
IUUC-Ptr-091036	Pan troglodytes	41.51	2.00e-145	509.00
IUUC-Pan-092576	Papio anubis	41.63	1.00e-146	513.00
IUUC-Psi-093450	Pelodiscus sinensis	42.51	1.00e-141	496.00
IUUC-Pma-094101	Petromyzon marinus	49.67	3.00e-85	308.00
IUUC-Ppa-095262	Physcomitrella patens	31.88	2.00e-36	147.00
IUUC-Pfo-097142	Poecilia formosa	63.62	0.00e+00	778.00
IUUC-Pab-097829	Pongo abelii	41.85	5.00e-146	511.00
IUUC-Pop-099687	Populus trichocarpa	33.33	6.00e-36	145.00
IUUC-Pca-100217	Procavia capensis	49.35	5.00e-90	325.00
IUUC-Ppe-101502	Prunus persica	32.04	1.00e-35	145.00
IUUC-Pva-102736	Pteropus vampyrus	41.49	5.00e-138	484.00
IUUC-Rno-104977	Rattus norvegicus	54.22	2.00e-102	366.00
IUUC-Sha-107003	Sarcophilus harrisii	41.89	2.00e-136	479.00
IUUC-Smo-109002	Selaginella moellendorffii	32.04	8.00e-36	145.00
IUUC-Sit-109796	Setaria italica	32.99	2.00e-36	147.00
IUUC-Sly-110941	Solanum lycopersicum	31.73	3.00e-35	143.00
IUUC-Stu-112314	Solanum tuberosum	32.05	2.00e-35	144.00
IUUC-Sar-112926	Sorex araneus	37.36	2.00e-119	422.00
IUUC-Sbi-113822	Sorghum bicolor	35.96	2.00e-24	107.00
IUUC-Ssc-116242	Sus scrofa	55.45	2.00e-103	368.00
IUUC-Tgu-116765	Taeniopygia guttata	41.49	3.00e-136	478.00
IUUC-Tru-117738	Takifugu rubripes	59.48	0.00e+00	800.00
IUUC-Tsy-118856	Tarsius syrichta	40.84	8.00e-123	434.00
IUUC-Tni-120871	Tetraodon nigroviridis	59.94	0.00e+00	779.00
IUUC-Tca-120965	Theobroma cacao	31.41	1.00e-34	141.00
IUUC-Tae-123588	Triticum aestivum	32.70	1.00e-36	148.00
IUUC-Tur-126840	Triticum urartu	32.70	2.00e-36	147.00
IUUC-Ttr-128551	Tursiops truncatus	40.87	4.00e-131	461.00
IUUC-Vpa-130324	Vicugna pacos	55.19	2.00e-104	373.00
IUUC-Vvi-131699	Vitis vinifera	31.94	2.00e-35	144.00
IUUC-Xtr-131956	Xenopus tropicalis	44.18	3.00e-148	518.00
IUUC-Xma-132982	Xiphophorus maculatus	63.62	0.00e+00	777.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence